Wall clock time and date at job start Sun Mar 7 2021 02:35:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39055 * 110.99854 * 236.04434 * 2 1 3 5 5 C 1.39189 * 119.93336 * 239.73141 * 4 2 1 6 6 C 1.50699 * 119.96513 * 359.97438 * 5 4 2 7 7 O 1.42897 * 109.46965 * 75.00563 * 6 5 4 8 8 Si 1.86299 * 109.47243 * 195.00125 * 6 5 4 9 9 C 1.37634 * 120.06841 * 179.72480 * 5 4 2 10 10 C 1.39773 * 119.92800 * 0.54663 * 9 5 4 11 11 C 1.47523 * 120.06701 * 179.74343 * 10 9 5 12 12 O 1.21593 * 120.00052 * 359.97438 * 11 10 9 13 13 N 1.34777 * 119.99932 * 179.97438 * 11 10 9 14 14 C 1.46501 * 120.00083 * 180.02562 * 13 11 10 15 15 H 1.08999 * 112.84688 * 25.33053 * 14 13 11 16 16 C 1.53775 * 113.61496 * 156.52828 * 14 13 11 17 17 C 1.53783 * 87.08249 * 139.98187 * 16 14 13 18 18 H 1.08997 * 113.61753 * 89.19746 * 17 16 14 19 19 C 1.53001 * 113.61363 * 220.02261 * 17 16 14 20 20 N 1.46505 * 109.47119 * 184.99706 * 19 17 16 21 21 C 1.34946 * 126.03598 * 124.71351 * 20 19 17 22 22 C 1.35322 * 107.74146 * 179.84078 * 21 20 19 23 23 C 1.39869 * 107.91952 * 0.42287 * 22 21 20 24 24 N 1.30829 * 108.20418 * 359.73851 * 23 22 21 25 25 C 1.53781 * 113.61381 * 254.13585 * 14 13 11 26 26 C 1.39813 * 119.86667 * 359.72615 * 10 9 5 27 27 C 1.37595 * 119.92779 * 359.97438 * 26 10 9 28 28 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 29 29 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 30 30 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 31 31 H 1.09007 * 109.46909 * 60.00094 * 3 2 1 32 32 H 1.08998 * 109.47110 * 179.97438 * 3 2 1 33 33 H 1.09002 * 109.47061 * 300.00284 * 3 2 1 34 34 H 1.08996 * 109.47294 * 315.00141 * 6 5 4 35 35 H 0.96696 * 114.00429 * 59.99349 * 7 6 5 36 36 H 1.48496 * 110.00301 * 180.02562 * 8 6 5 37 37 H 1.48499 * 110.00206 * 301.32157 * 8 6 5 38 38 H 1.08001 * 120.03741 * 180.24820 * 9 5 4 39 39 H 0.97002 * 119.99714 * 0.02562 * 13 11 10 40 40 H 1.08998 * 113.61652 * 254.52731 * 16 14 13 41 41 H 1.08999 * 113.61505 * 25.34737 * 16 14 13 42 42 H 1.09001 * 109.46750 * 304.99532 * 19 17 16 43 43 H 1.08994 * 109.47267 * 64.99842 * 19 17 16 44 44 H 1.07995 * 126.12877 * 359.97438 * 21 20 19 45 45 H 1.08002 * 126.03908 * 180.15977 * 22 21 20 46 46 H 1.08002 * 125.89680 * 179.76033 * 23 22 21 47 47 H 1.09005 * 113.61241 * 334.56688 * 25 14 13 48 48 H 1.08997 * 113.61314 * 105.46716 * 25 14 13 49 49 H 1.07994 * 120.03772 * 180.02562 * 26 10 9 50 50 H 1.07996 * 119.96661 * 180.02562 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7251 -1.0768 5 6 2.7838 -1.8297 -0.8521 6 6 3.1270 -2.2377 0.5575 7 8 1.9958 -2.8707 1.1588 8 14 4.5610 -3.4265 0.5282 9 6 3.2739 -2.5528 -1.9157 10 6 2.9602 -2.1700 -3.2228 11 6 3.4885 -2.9395 -4.3653 12 8 4.1980 -3.9075 -4.1703 13 7 3.1848 -2.5694 -5.6251 14 6 3.7089 -3.3339 -6.7597 15 1 3.9366 -4.3686 -6.5037 16 6 2.8721 -3.1861 -8.0413 17 6 4.2029 -3.1372 -8.8106 18 1 4.5661 -4.1180 -9.1174 19 6 4.2151 -2.1159 -9.9498 20 7 5.4729 -2.2279 -10.6925 21 6 5.5951 -2.4361 -12.0202 22 6 6.9159 -2.4733 -12.3120 23 6 7.6252 -2.2909 -11.1203 24 7 6.7613 -2.1437 -10.1489 25 6 4.8457 -2.6205 -7.5106 26 6 2.1445 -1.0566 -3.4455 27 6 1.6526 -0.3415 -2.3778 28 1 -0.3634 -1.0252 0.0708 29 1 -0.3633 0.4513 -0.9233 30 1 -0.3633 0.5740 0.8525 31 1 1.6461 1.8947 0.8901 32 1 3.0851 1.3422 0.0005 33 1 1.6460 1.8948 -0.8900 34 1 3.3990 -1.3545 1.1354 35 1 1.6978 -3.6658 0.6961 36 1 4.9089 -3.8370 1.9123 37 1 4.2143 -4.6209 -0.2832 38 1 3.9042 -3.4122 -1.7406 39 1 2.6191 -1.7969 -5.7807 40 1 2.2669 -4.0629 -8.2712 41 1 2.3050 -2.2564 -8.0877 42 1 3.3784 -2.3102 -10.6208 43 1 4.1247 -1.1109 -9.5377 44 1 4.7840 -2.5503 -12.7241 45 1 7.3464 -2.6222 -13.2913 46 1 8.7004 -2.2741 -11.0196 47 1 4.8202 -1.5352 -7.4122 48 1 5.8313 -3.0415 -7.3125 49 1 1.9000 -0.7586 -4.4543 50 1 1.0220 0.5184 -2.5491 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:35:26 Heat of formation + Delta-G solvation = 91.412575 kcal Electronic energy + Delta-G solvation = -31142.392771 eV Core-core repulsion = 26946.595276 eV Total energy + Delta-G solvation = -4195.797495 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.184 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.07251 -41.71502 -40.83912 -39.44340 -37.86560 -37.19685 -35.23177 -33.69978 -32.66696 -31.31440 -30.90549 -28.64038 -28.60273 -26.89639 -26.84488 -26.32103 -24.26474 -23.10009 -22.75633 -21.92387 -21.55449 -21.33792 -20.71320 -19.07279 -18.29177 -17.91183 -17.68855 -17.37833 -16.66564 -16.56434 -16.27674 -16.19762 -15.94543 -15.67611 -15.59965 -15.41393 -15.07053 -14.92474 -14.87377 -14.76362 -14.16594 -14.03916 -13.88252 -13.67281 -13.63948 -13.53994 -13.47230 -13.20425 -13.04511 -12.95975 -12.72858 -12.62747 -12.30032 -12.10796 -11.95055 -11.62002 -11.59281 -11.41038 -10.91928 -10.46157 -10.29732 -10.14312 -10.12386 -9.78856 -9.56518 -9.47254 -4.86250 -0.36472 0.12604 1.02054 1.37313 1.58016 1.69435 1.71727 2.01274 2.05146 2.05843 2.64667 2.73869 3.18994 3.30960 3.45210 3.50101 3.58273 3.62284 3.68011 3.76770 3.91700 3.94363 3.96291 4.06042 4.08223 4.17071 4.21220 4.25168 4.26362 4.40189 4.47544 4.51299 4.52305 4.58581 4.64026 4.65111 4.73432 4.79618 4.84812 4.86442 4.90003 4.91763 5.01150 5.06941 5.09271 5.14775 5.16419 5.23946 5.45775 5.55085 5.76309 5.78734 6.10781 6.24602 6.40992 6.53865 6.84130 7.16109 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 N -0.508 5.508 3 C 0.025 3.975 4 C 0.144 3.856 5 C -0.104 4.104 6 C -0.051 4.051 7 O -0.517 6.517 8 Si 0.671 3.329 9 C -0.057 4.057 10 C -0.137 4.137 11 C 0.561 3.439 12 O -0.531 6.531 13 N -0.716 5.716 14 C 0.122 3.878 15 H 0.117 0.883 16 C -0.138 4.138 17 C -0.119 4.119 18 H 0.100 0.900 19 C 0.145 3.855 20 N -0.373 5.373 21 C 0.050 3.950 22 C -0.274 4.274 23 C 0.042 3.958 24 N -0.289 5.289 25 C -0.133 4.133 26 C -0.069 4.069 27 C -0.158 4.158 28 H 0.073 0.927 29 H 0.030 0.970 30 H 0.076 0.924 31 H 0.077 0.923 32 H 0.073 0.927 33 H 0.032 0.968 34 H 0.123 0.877 35 H 0.370 0.630 36 H -0.254 1.254 37 H -0.257 1.257 38 H 0.145 0.855 39 H 0.400 0.600 40 H 0.081 0.919 41 H 0.090 0.910 42 H 0.098 0.902 43 H 0.086 0.914 44 H 0.172 0.828 45 H 0.147 0.853 46 H 0.182 0.818 47 H 0.086 0.914 48 H 0.079 0.921 49 H 0.127 0.873 50 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.619 4.347 -4.611 7.297 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 N -0.228 5.228 3 C -0.121 4.121 4 C 0.049 3.951 5 C -0.105 4.105 6 C -0.161 4.161 7 O -0.323 6.323 8 Si 0.572 3.428 9 C -0.076 4.076 10 C -0.140 4.140 11 C 0.348 3.652 12 O -0.408 6.408 13 N -0.368 5.368 14 C 0.018 3.982 15 H 0.135 0.865 16 C -0.177 4.177 17 C -0.138 4.138 18 H 0.118 0.882 19 C 0.024 3.976 20 N -0.156 5.156 21 C -0.096 4.096 22 C -0.304 4.304 23 C -0.144 4.144 24 N -0.110 5.110 25 C -0.172 4.172 26 C -0.088 4.088 27 C -0.179 4.179 28 H 0.092 0.908 29 H 0.049 0.951 30 H 0.095 0.905 31 H 0.096 0.904 32 H 0.092 0.908 33 H 0.050 0.950 34 H 0.141 0.859 35 H 0.216 0.784 36 H -0.179 1.179 37 H -0.182 1.182 38 H 0.162 0.838 39 H 0.235 0.765 40 H 0.100 0.900 41 H 0.109 0.891 42 H 0.116 0.884 43 H 0.104 0.896 44 H 0.189 0.811 45 H 0.164 0.836 46 H 0.199 0.801 47 H 0.105 0.895 48 H 0.097 0.903 49 H 0.145 0.855 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -2.914 3.331 -2.063 4.883 hybrid contribution -1.613 0.251 -2.057 2.626 sum -4.527 3.583 -4.120 7.092 Atomic orbital electron populations 1.22442 0.85068 1.03089 1.00933 1.59399 1.08968 1.14128 1.40331 1.22511 1.01143 0.87027 1.01439 1.18820 0.94198 0.93303 0.88737 1.20216 0.98661 0.95536 0.96098 1.24787 0.96062 1.03988 0.91312 1.86666 1.46919 1.44021 1.54658 0.95114 0.84365 0.81588 0.81716 1.21262 0.96886 0.98655 0.90756 1.19853 1.02401 0.98080 0.93627 1.18208 0.80115 0.83922 0.82906 1.90818 1.37196 1.27501 1.85291 1.45878 1.52938 1.32602 1.05351 1.22545 0.94719 0.97527 0.83445 0.86474 1.23376 0.96276 1.03426 0.94589 1.22659 0.97519 0.99792 0.93841 0.88164 1.21730 0.81578 1.00288 0.94019 1.48733 1.05804 1.55491 1.05524 1.22603 0.99163 1.01666 0.86182 1.21564 0.92401 1.16220 1.00189 1.23955 1.00007 0.99682 0.90776 1.77398 0.87215 1.23824 1.22584 1.23471 0.99231 1.00964 0.93513 1.21144 0.95079 0.93539 0.99075 1.21648 1.02077 1.01190 0.92941 0.90847 0.95145 0.90524 0.90387 0.90823 0.94967 0.85949 0.78359 1.17864 1.18163 0.83768 0.76456 0.89987 0.89124 0.88384 0.89612 0.81064 0.83560 0.80079 0.89534 0.90272 0.85515 0.85311 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.34 60.07 0.56 0.54 16 2 N -0.51 -0.13 4.20 -186.85 -0.78 -0.91 16 3 C 0.03 -0.03 9.32 60.06 0.56 0.53 16 4 C 0.14 0.07 4.69 -83.86 -0.39 -0.33 16 5 C -0.10 -0.10 5.27 -104.49 -0.55 -0.65 16 6 C -0.05 -0.05 2.33 36.00 0.08 0.04 16 7 O -0.52 -1.07 12.88 -35.23 -0.45 -1.52 16 8 Si 0.67 0.54 30.25 -169.99 -5.14 -4.60 16 9 C -0.06 -0.09 8.19 -39.23 -0.32 -0.41 16 10 C -0.14 -0.13 5.88 -104.95 -0.62 -0.75 16 11 C 0.56 1.26 7.76 -12.47 -0.10 1.17 16 12 O -0.53 -3.26 15.95 5.28 0.08 -3.18 16 13 N -0.72 0.65 5.31 -54.06 -0.29 0.37 16 14 C 0.12 -0.10 4.21 -67.12 -0.28 -0.38 16 15 H 0.12 0.14 7.50 -51.93 -0.39 -0.25 16 16 C -0.14 0.48 7.39 -25.92 -0.19 0.28 16 17 C -0.12 0.23 3.83 -89.71 -0.34 -0.11 16 18 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 19 C 0.15 -0.33 6.35 -4.04 -0.03 -0.35 16 20 N -0.37 -0.33 3.68 -61.36 -0.23 -0.55 16 21 C 0.05 0.00 11.45 -17.22 -0.20 -0.20 16 22 C -0.27 -0.23 10.80 -40.01 -0.43 -0.66 16 23 C 0.04 0.08 12.02 -17.37 -0.21 -0.13 16 24 N -0.29 -0.93 12.42 30.62 0.38 -0.55 16 25 C -0.13 0.06 7.45 -25.83 -0.19 -0.13 16 26 C -0.07 0.09 9.53 -39.23 -0.37 -0.28 16 27 C -0.16 0.14 8.57 -39.44 -0.34 -0.20 16 28 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 29 H 0.03 -0.05 7.09 -51.93 -0.37 -0.41 16 30 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.08 -0.14 8.14 -51.92 -0.42 -0.57 16 32 H 0.07 -0.10 8.12 -51.93 -0.42 -0.52 16 33 H 0.03 -0.06 7.45 -51.93 -0.39 -0.45 16 34 H 0.12 0.11 7.78 -51.93 -0.40 -0.30 16 35 H 0.37 -0.21 8.70 45.56 0.40 0.19 16 36 H -0.25 -0.94 7.11 56.52 0.40 -0.54 16 37 H -0.26 -0.81 6.68 56.52 0.38 -0.43 16 38 H 0.15 0.32 4.43 -52.49 -0.23 0.09 16 39 H 0.40 -1.49 6.73 -40.82 -0.27 -1.76 16 40 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 41 H 0.09 -0.46 8.07 -51.93 -0.42 -0.88 16 42 H 0.10 -0.45 8.07 -51.93 -0.42 -0.87 16 43 H 0.09 -0.23 7.85 -51.93 -0.41 -0.64 16 44 H 0.17 -0.57 8.06 -52.49 -0.42 -0.99 16 45 H 0.15 -0.13 8.06 -52.49 -0.42 -0.56 16 46 H 0.18 -0.11 8.06 -52.49 -0.42 -0.53 16 47 H 0.09 -0.06 7.90 -51.93 -0.41 -0.47 16 48 H 0.08 0.15 8.14 -51.93 -0.42 -0.27 16 49 H 0.13 -0.53 6.39 -52.49 -0.34 -0.87 16 50 H 0.13 -0.29 7.01 -52.49 -0.37 -0.66 16 LS Contribution 408.98 15.07 6.16 6.16 Total: 0.00 -9.52 408.98 -11.09 -20.61 By element: Atomic # 1 Polarization: -6.34 SS G_CDS: -7.47 Total: -13.81 kcal Atomic # 6 Polarization: 1.34 SS G_CDS: -3.36 Total: -2.02 kcal Atomic # 7 Polarization: -0.73 SS G_CDS: -0.92 Total: -1.65 kcal Atomic # 8 Polarization: -4.33 SS G_CDS: -0.37 Total: -4.70 kcal Atomic # 14 Polarization: 0.54 SS G_CDS: -5.14 Total: -4.60 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -9.52 -11.09 -20.61 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 112.024 kcal (2) G-P(sol) polarization free energy of solvation -9.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 102.507 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.094 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.611 kcal (6) G-S(sol) free energy of system = (1) + (5) 91.413 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds