Wall clock time and date at job start Sun Mar 7 2021 02:35:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35995 * 117.00056 * 2 1 4 4 C 1.38550 * 120.06916 * 0.22973 * 3 2 1 5 5 C 1.38279 * 120.02077 * 180.27969 * 4 3 2 6 6 C 1.50692 * 119.92100 * 179.72508 * 5 4 3 7 7 O 1.42897 * 109.47338 * 65.02193 * 6 5 4 8 8 Si 1.86306 * 109.46902 * 185.01895 * 6 5 4 9 9 C 1.38206 * 120.15207 * 359.74134 * 5 4 3 10 10 C 1.38380 * 120.13499 * 0.02562 * 9 5 4 11 11 Cl 1.73596 * 120.01153 * 179.97438 * 10 9 5 12 12 C 1.38629 * 119.97767 * 359.97438 * 10 9 5 13 13 O 1.36022 * 120.07650 * 179.97438 * 12 10 9 14 14 C 1.42894 * 117.00341 * 89.99606 * 13 12 10 15 15 C 1.53001 * 109.46929 * 89.99781 * 14 13 12 16 16 C 1.50691 * 109.47338 * 210.00115 * 14 13 12 17 17 O 1.21283 * 120.00278 * 359.97438 * 16 14 13 18 18 N 1.34782 * 120.00122 * 180.02562 * 16 14 13 19 19 C 1.46504 * 120.00014 * 180.02562 * 18 16 14 20 20 H 1.08999 * 112.85113 * 23.80161 * 19 18 16 21 21 C 1.53778 * 113.61214 * 154.99486 * 19 18 16 22 22 C 1.53787 * 87.08035 * 139.97990 * 21 19 18 23 23 H 1.09004 * 113.61202 * 89.11582 * 22 21 19 24 24 C 1.52992 * 113.61596 * 220.01776 * 22 21 19 25 25 N 1.46503 * 109.47166 * 184.99788 * 24 22 21 26 26 C 1.34944 * 126.03883 * 125.00100 * 25 24 22 27 27 C 1.35311 * 107.74864 * 179.97438 * 26 25 24 28 28 C 1.39869 * 107.91841 * 359.97438 * 27 26 25 29 29 N 1.30833 * 108.20318 * 359.74020 * 28 27 26 30 30 C 1.53778 * 113.61207 * 252.49389 * 19 18 16 31 31 H 1.09004 * 109.46992 * 59.99856 * 1 2 3 32 32 H 1.08997 * 109.47551 * 180.02562 * 1 2 3 33 33 H 1.08998 * 109.46963 * 300.00298 * 1 2 3 34 34 H 1.08002 * 119.98828 * 0.04407 * 4 3 2 35 35 H 1.09002 * 109.47667 * 305.01669 * 6 5 4 36 36 H 0.96705 * 114.00030 * 179.97438 * 7 6 5 37 37 H 1.48501 * 109.99921 * 178.67784 * 8 6 5 38 38 H 1.48497 * 110.00238 * 300.00144 * 8 6 5 39 39 H 1.07996 * 119.93371 * 179.97438 * 9 5 4 40 40 H 1.09009 * 109.47205 * 330.00453 * 14 13 12 41 41 H 1.09001 * 109.46977 * 180.02562 * 15 14 13 42 42 H 1.08999 * 109.47179 * 300.00093 * 15 14 13 43 43 H 1.08993 * 109.46934 * 60.00618 * 15 14 13 44 44 H 0.97001 * 120.00210 * 359.97438 * 18 16 14 45 45 H 1.08998 * 113.61879 * 25.43473 * 21 19 18 46 46 H 1.08999 * 113.61887 * 254.52580 * 21 19 18 47 47 H 1.08996 * 109.47544 * 305.00011 * 24 22 21 48 48 H 1.09007 * 109.47088 * 65.00447 * 24 22 21 49 49 H 1.08001 * 126.12247 * 359.95891 * 26 25 24 50 50 H 1.08001 * 126.04018 * 180.02562 * 27 26 25 51 51 H 1.07999 * 125.89653 * 180.02562 * 28 27 26 52 52 H 1.08993 * 113.61229 * 105.47290 * 30 19 18 53 53 H 1.09000 * 113.61263 * 334.56940 * 30 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 1.2932 2.3746 0.0048 5 6 1.9220 3.6061 -0.0010 6 6 1.1006 4.8695 -0.0021 7 8 0.3682 4.9625 1.2214 8 14 2.2286 6.3434 -0.1640 9 6 3.3021 3.6810 -0.0063 10 6 4.0606 2.5236 -0.0063 11 17 5.7938 2.6213 -0.0135 12 6 3.4359 1.2860 -0.0004 13 8 4.1795 0.1471 -0.0009 14 6 4.5399 -0.3930 1.2720 15 6 3.4607 -1.3743 1.7338 16 6 5.8582 -1.1138 1.1569 17 8 6.4325 -1.1609 0.0896 18 7 6.3988 -1.7071 2.2396 19 6 7.6807 -2.4074 2.1278 20 1 8.2853 -2.0529 1.2930 21 6 8.4532 -2.4940 3.4547 22 6 8.8296 -3.9294 3.0511 23 1 9.7486 -3.9924 2.4684 24 6 8.7927 -4.9227 4.2142 25 7 9.2786 -6.2273 3.7578 26 6 10.2860 -6.9363 4.3086 27 6 10.4221 -8.0799 3.5982 28 6 9.4647 -8.0696 2.5786 29 7 8.7747 -6.9623 2.6770 30 6 7.5538 -3.9386 2.1924 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3634 -1.0276 0.0005 33 1 -0.3633 0.5139 0.8899 34 1 0.2147 2.3192 0.0093 35 1 0.4053 4.8502 -0.8413 36 1 -0.1838 5.7535 1.2902 37 1 1.4284 7.5940 -0.1984 38 1 3.1816 6.3812 0.9742 39 1 3.7895 4.6447 -0.0113 40 1 4.6301 0.4156 1.9975 41 1 3.7354 -1.7859 2.7049 42 1 2.5071 -0.8529 1.8171 43 1 3.3705 -2.1828 1.0084 44 1 5.9394 -1.6698 3.0932 45 1 7.8142 -2.4416 4.3362 46 1 9.3062 -1.8176 3.5083 47 1 9.4287 -4.5604 5.0218 48 1 7.7688 -5.0222 4.5747 49 1 10.8778 -6.6433 5.1632 50 1 11.1422 -8.8626 3.7858 51 1 9.3171 -8.8443 1.8407 52 1 7.6809 -4.4283 1.2270 53 1 6.6689 -4.2811 2.7288 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688084_13428712.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:35:29 Heat of formation + Delta-G solvation = 2.329595 kcal Electronic energy + Delta-G solvation = -38196.015191 eV Core-core repulsion = 33064.616502 eV Total energy + Delta-G solvation = -5131.398689 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.149 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -42.08039 -41.96807 -41.22396 -39.89291 -39.20326 -38.79546 -37.81724 -37.06280 -35.29306 -33.89067 -32.82529 -31.49844 -31.36620 -30.91947 -28.57226 -28.49580 -26.73007 -26.71808 -25.74141 -23.97922 -23.58793 -22.65259 -21.91393 -21.75669 -21.46720 -20.69286 -19.66100 -18.72880 -18.56853 -18.43167 -18.20278 -17.99196 -17.37083 -16.89056 -16.72133 -16.50556 -16.30631 -16.11939 -15.93006 -15.77202 -15.54364 -15.24684 -15.11479 -14.87583 -14.70682 -14.56129 -14.19708 -14.01372 -13.99665 -13.88635 -13.55222 -13.49943 -13.43951 -13.40433 -13.25251 -12.97992 -12.94228 -12.76349 -12.72831 -12.41566 -12.21991 -12.16104 -11.98270 -11.85961 -11.75457 -11.61118 -11.38161 -11.35899 -10.73955 -10.57298 -10.32895 -10.11576 -9.87236 -9.47515 -9.42924 -4.94181 -0.35798 -0.04042 0.83544 1.02523 1.22222 1.43183 1.55864 1.61752 1.71462 1.90327 1.97111 2.14503 2.20337 2.68515 3.19593 3.33502 3.43623 3.53267 3.60130 3.68575 3.71170 3.75700 3.78296 3.81637 3.94769 3.99773 4.01371 4.05643 4.09805 4.21897 4.26155 4.31194 4.35904 4.38899 4.41754 4.56483 4.67147 4.67597 4.69082 4.72658 4.74214 4.77628 4.81019 4.81622 4.92993 4.98476 5.04302 5.08349 5.13594 5.16915 5.18602 5.21182 5.50977 5.76865 5.90549 6.21330 6.30791 6.46806 6.55849 6.80984 7.13036 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.312 6.312 3 C 0.128 3.872 4 C -0.163 4.163 5 C -0.025 4.025 6 C -0.075 4.075 7 O -0.552 6.552 8 Si 0.740 3.260 9 C -0.138 4.138 10 C -0.023 4.023 11 Cl -0.049 7.049 12 C 0.053 3.947 13 O -0.307 6.307 14 C 0.073 3.927 15 C -0.160 4.160 16 C 0.516 3.484 17 O -0.563 6.563 18 N -0.700 5.700 19 C 0.116 3.884 20 H 0.087 0.913 21 C -0.113 4.113 22 C -0.111 4.111 23 H 0.082 0.918 24 C 0.140 3.860 25 N -0.376 5.376 26 C 0.053 3.947 27 C -0.293 4.293 28 C 0.025 3.975 29 N -0.332 5.332 30 C -0.133 4.133 31 H 0.069 0.931 32 H 0.118 0.882 33 H 0.070 0.930 34 H 0.164 0.836 35 H 0.112 0.888 36 H 0.400 0.600 37 H -0.275 1.275 38 H -0.296 1.296 39 H 0.152 0.848 40 H 0.101 0.899 41 H 0.100 0.900 42 H 0.079 0.921 43 H 0.058 0.942 44 H 0.418 0.582 45 H 0.121 0.879 46 H 0.089 0.911 47 H 0.132 0.868 48 H 0.094 0.906 49 H 0.207 0.793 50 H 0.160 0.840 51 H 0.192 0.808 52 H 0.042 0.958 53 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.355 2.660 7.121 8.761 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.225 6.225 3 C 0.081 3.919 4 C -0.182 4.182 5 C -0.025 4.025 6 C -0.185 4.185 7 O -0.362 6.362 8 Si 0.645 3.355 9 C -0.156 4.156 10 C -0.051 4.051 11 Cl -0.020 7.020 12 C 0.007 3.993 13 O -0.223 6.223 14 C 0.014 3.986 15 C -0.218 4.218 16 C 0.302 3.698 17 O -0.440 6.440 18 N -0.354 5.354 19 C 0.011 3.989 20 H 0.105 0.895 21 C -0.152 4.152 22 C -0.131 4.131 23 H 0.100 0.900 24 C 0.019 3.981 25 N -0.159 5.159 26 C -0.094 4.094 27 C -0.323 4.323 28 C -0.161 4.161 29 N -0.154 5.154 30 C -0.172 4.172 31 H 0.088 0.912 32 H 0.137 0.863 33 H 0.089 0.911 34 H 0.181 0.819 35 H 0.129 0.871 36 H 0.251 0.749 37 H -0.202 1.202 38 H -0.223 1.223 39 H 0.169 0.831 40 H 0.119 0.881 41 H 0.119 0.881 42 H 0.098 0.902 43 H 0.077 0.923 44 H 0.256 0.744 45 H 0.139 0.861 46 H 0.108 0.892 47 H 0.150 0.850 48 H 0.112 0.888 49 H 0.224 0.776 50 H 0.177 0.823 51 H 0.209 0.791 52 H 0.061 0.939 53 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -4.090 3.363 6.229 8.175 hybrid contribution -0.334 -0.302 0.979 1.078 sum -4.425 3.061 7.208 8.994 Atomic orbital electron populations 1.23468 0.75988 1.05934 1.02741 1.86216 1.23530 1.25041 1.87727 1.19185 0.90404 0.86170 0.96184 1.21324 1.01780 0.89991 1.05069 1.19194 0.91953 0.94637 0.96741 1.24815 1.01130 1.02209 0.90325 1.86525 1.63003 1.48977 1.37735 0.94105 0.79176 0.74240 0.87932 1.20875 0.93166 0.97260 1.04317 1.21042 0.85958 0.93591 1.04469 1.98409 1.08465 1.98470 1.96614 1.17777 0.87410 0.85334 1.08777 1.86254 1.69863 1.38122 1.28072 1.22336 0.92916 0.97469 0.85854 1.22243 0.98198 0.98885 1.02460 1.20618 0.86299 0.78612 0.84283 1.90734 1.63351 1.60513 1.29404 1.45740 1.22911 1.54795 1.11925 1.22503 0.84652 0.91659 1.00091 0.89464 1.23309 1.00634 0.94547 0.96667 1.22487 0.98366 0.95283 0.96925 0.90009 1.22021 1.02485 0.76900 0.96647 1.48996 1.26464 1.17117 1.23328 1.23202 0.92688 0.93015 1.00477 1.21857 1.07029 1.02225 1.01145 1.24310 0.95202 0.96443 1.00105 1.77333 1.23848 1.07221 1.06983 1.23408 0.98465 0.95191 1.00087 0.91234 0.86340 0.91110 0.81863 0.87078 0.74913 1.20165 1.22310 0.83059 0.88116 0.88139 0.90181 0.92328 0.74386 0.86098 0.89247 0.85035 0.88779 0.77586 0.82286 0.79099 0.93871 0.88750 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.31 -0.95 8.23 -79.62 -0.66 -1.61 16 3 C 0.13 0.57 6.54 22.56 0.15 0.72 16 4 C -0.16 -0.11 8.67 22.35 0.19 0.09 16 5 C -0.02 -0.02 5.38 -19.86 -0.11 -0.13 16 6 C -0.08 0.27 2.79 71.23 0.20 0.47 16 7 O -0.55 1.17 12.81 -148.98 -1.91 -0.73 16 8 Si 0.74 -2.24 29.84 68.60 2.05 -0.20 16 9 C -0.14 -0.43 8.45 22.30 0.19 -0.25 16 10 C -0.02 -0.17 6.33 22.40 0.14 -0.02 16 11 Cl -0.05 -0.43 28.50 -2.72 -0.08 -0.51 16 12 C 0.05 0.44 5.56 22.58 0.13 0.56 16 13 O -0.31 -3.61 8.48 -67.38 -0.57 -4.18 16 14 C 0.07 0.38 3.20 29.85 0.10 0.48 16 15 C -0.16 -0.04 9.01 71.98 0.65 0.61 16 16 C 0.52 4.36 7.23 87.65 0.63 4.99 16 17 O -0.56 -10.74 16.10 16.00 0.26 -10.48 16 18 N -0.70 -0.06 5.25 -440.04 -2.31 -2.37 16 19 C 0.12 0.12 4.24 45.51 0.19 0.32 16 20 H 0.09 0.66 7.47 -2.39 -0.02 0.64 16 21 C -0.11 0.77 7.39 31.12 0.23 1.00 16 22 C -0.11 0.30 3.83 -10.27 -0.04 0.26 16 23 H 0.08 0.11 8.14 -2.39 -0.02 0.09 16 24 C 0.14 -0.70 6.34 86.38 0.55 -0.15 16 25 N -0.38 -0.87 3.68 -348.07 -1.28 -2.15 16 26 C 0.05 -0.02 11.45 83.54 0.96 0.94 16 27 C -0.29 -0.73 10.80 21.99 0.24 -0.49 16 28 C 0.02 0.15 12.03 85.24 1.02 1.17 16 29 N -0.33 -2.87 12.42 -57.03 -0.71 -3.58 16 30 C -0.13 -0.24 7.43 31.12 0.23 -0.01 16 31 H 0.07 -0.48 7.67 -2.38 -0.02 -0.50 16 32 H 0.12 -0.93 8.14 -2.39 -0.02 -0.95 16 33 H 0.07 -0.52 7.65 -2.39 -0.02 -0.54 16 34 H 0.16 -0.66 6.30 -2.91 -0.02 -0.67 16 35 H 0.11 -0.97 7.96 -2.39 -0.02 -0.99 16 36 H 0.40 -4.01 8.74 -74.05 -0.65 -4.66 16 37 H -0.28 -0.06 7.11 99.48 0.71 0.65 16 38 H -0.30 -1.33 7.05 99.48 0.70 -0.63 16 39 H 0.15 0.07 4.85 -2.91 -0.01 0.06 16 40 H 0.10 0.17 7.91 -2.38 -0.02 0.15 16 41 H 0.10 -0.65 7.56 -2.39 -0.02 -0.66 16 42 H 0.08 0.02 6.31 -2.39 -0.02 0.01 16 43 H 0.06 0.24 8.14 -2.39 -0.02 0.22 16 44 H 0.42 -3.16 8.14 -92.71 -0.76 -3.92 16 45 H 0.12 -1.49 8.08 -2.39 -0.02 -1.51 16 46 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 47 H 0.13 -1.53 8.07 -2.39 -0.02 -1.55 16 48 H 0.09 -0.59 7.84 -2.38 -0.02 -0.61 16 49 H 0.21 -1.77 8.06 -2.91 -0.02 -1.79 16 50 H 0.16 -0.21 8.06 -2.91 -0.02 -0.23 16 51 H 0.19 0.28 8.06 -2.91 -0.02 0.25 16 52 H 0.04 0.38 8.14 -2.39 -0.02 0.37 16 53 H 0.09 0.01 7.90 -2.39 -0.02 -0.01 16 Total: 0.00 -32.81 453.29 1.16 -31.65 By element: Atomic # 1 Polarization: -17.06 SS G_CDS: -0.40 Total: -17.46 kcal Atomic # 6 Polarization: 4.86 SS G_CDS: 6.76 Total: 11.62 kcal Atomic # 7 Polarization: -3.80 SS G_CDS: -4.30 Total: -8.10 kcal Atomic # 8 Polarization: -14.13 SS G_CDS: -2.88 Total: -17.00 kcal Atomic # 14 Polarization: -2.24 SS G_CDS: 2.05 Total: -0.20 kcal Atomic # 17 Polarization: -0.43 SS G_CDS: -0.08 Total: -0.51 kcal Total: -32.81 1.16 -31.65 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_13428712.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.977 kcal (2) G-P(sol) polarization free energy of solvation -32.808 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.169 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.160 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.648 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.330 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds