Wall clock time and date at job start Sun Mar 7 2021 02:35:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86308 * 109.47108 * 2 1 4 4 C 1.50702 * 109.47178 * 240.00092 * 2 1 3 5 5 C 1.32694 * 124.68319 * 300.00195 * 4 2 1 6 6 C 1.44508 * 113.09410 * 179.97438 * 5 4 2 7 7 C 1.47045 * 123.48856 * 179.97438 * 6 5 4 8 8 O 1.21655 * 120.00400 * 179.97438 * 7 6 5 9 9 N 1.34779 * 120.00250 * 359.97438 * 7 6 5 10 10 C 1.46497 * 120.00208 * 180.02562 * 9 7 6 11 11 H 1.08998 * 112.85217 * 23.80043 * 10 9 7 12 12 C 1.53784 * 113.61428 * 154.99904 * 10 9 7 13 13 C 1.53783 * 87.08148 * 140.06383 * 12 10 9 14 14 H 1.08995 * 113.61432 * 89.19867 * 13 12 10 15 15 C 1.52998 * 113.61251 * 220.01942 * 13 12 10 16 16 N 1.46502 * 109.47046 * 184.99780 * 15 13 12 17 17 C 1.34953 * 126.03718 * 125.00175 * 16 15 13 18 18 C 1.35312 * 107.74266 * 180.24977 * 17 16 15 19 19 C 1.39863 * 107.92527 * 359.64076 * 18 17 16 20 20 N 1.30837 * 108.19940 * 0.36269 * 19 18 17 21 21 C 1.53779 * 87.08144 * 334.56747 * 13 12 10 22 22 C 1.36225 * 113.01912 * 0.22960 * 6 5 4 23 23 Cl 1.73602 * 124.60259 * 179.76884 * 22 6 5 24 24 S 1.70440 * 110.78755 * 359.64910 * 22 6 5 25 25 H 0.96698 * 113.99953 * 60.00063 * 1 2 3 26 26 H 1.08998 * 109.47371 * 119.99683 * 2 1 3 27 27 H 1.48495 * 110.00002 * 298.68283 * 3 2 1 28 28 H 1.48495 * 109.99765 * 60.00160 * 3 2 1 29 29 H 1.07989 * 123.44972 * 359.97438 * 5 4 2 30 30 H 0.97006 * 119.99438 * 359.97438 * 9 7 6 31 31 H 1.09000 * 113.61472 * 25.51672 * 12 10 9 32 32 H 1.08994 * 113.61739 * 254.61186 * 12 10 9 33 33 H 1.08999 * 109.47688 * 65.00068 * 15 13 12 34 34 H 1.08997 * 109.47597 * 305.00185 * 15 13 12 35 35 H 1.08002 * 126.12372 * 359.97438 * 17 16 15 36 36 H 1.08008 * 126.03698 * 179.76435 * 18 17 16 37 37 H 1.08001 * 125.90034 * 180.14354 * 19 18 17 38 38 H 1.08998 * 113.61888 * 139.98362 * 21 13 12 39 39 H 1.09003 * 113.61675 * 270.88542 * 21 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6686 -1.9756 -1.5321 6 6 2.2769 -2.4008 -2.7720 7 6 2.1348 -3.7570 -3.3222 8 8 2.6747 -4.0468 -4.3731 9 7 1.4064 -4.6792 -2.6622 10 6 1.2653 -6.0305 -3.2100 11 1 2.0781 -6.3011 -3.8840 12 6 0.9666 -7.0989 -2.1451 13 6 -0.0089 -7.7225 -3.1573 14 1 0.4553 -8.4566 -3.8158 15 6 -1.3074 -8.2281 -2.5255 16 7 -2.1134 -8.9073 -3.5430 17 6 -2.5927 -10.1665 -3.4658 18 6 -3.2783 -10.4172 -4.6052 19 6 -3.2227 -9.2694 -5.4024 20 7 -2.5222 -8.3647 -4.7680 21 6 -0.1321 -6.3227 -3.7819 22 6 3.0001 -1.4167 -3.3755 23 17 3.8593 -1.6017 -4.8726 24 16 2.9439 0.0216 -2.4628 25 1 -0.3933 0.4417 -0.7650 26 1 1.7923 -0.5138 0.8900 27 1 1.5879 2.4586 -1.2242 28 1 1.5615 2.4679 1.2085 29 1 1.0624 -2.6213 -0.9142 30 1 0.9762 -4.4482 -1.8240 31 1 0.4781 -6.7033 -1.2546 32 1 1.8208 -7.7350 -1.9131 33 1 -1.8676 -7.3847 -2.1217 34 1 -1.0728 -8.9263 -1.7220 35 1 -2.4505 -10.8527 -2.6440 36 1 -3.7813 -11.3400 -4.8540 37 1 -3.6765 -9.1516 -6.3754 38 1 -0.1648 -6.3319 -4.8713 39 1 -0.9209 -5.7147 -3.3389 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:35:35 Heat of formation + Delta-G solvation = 74.990436 kcal Electronic energy + Delta-G solvation = -25511.851726 eV Core-core repulsion = 21576.733336 eV Total energy + Delta-G solvation = -3935.118391 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.059 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.04136 -41.25760 -39.87256 -38.86564 -37.88208 -37.03855 -35.09550 -33.47692 -31.72253 -30.91817 -28.70192 -27.02695 -26.80590 -26.14183 -23.65926 -22.25998 -21.90478 -21.46923 -21.13807 -20.41510 -19.41802 -18.37207 -18.09878 -17.77050 -17.07105 -16.63565 -16.55526 -16.02879 -15.95549 -15.79308 -15.53641 -15.10930 -14.94117 -14.76225 -14.40192 -14.36618 -14.02424 -13.90875 -13.64048 -13.54769 -13.46181 -13.04526 -12.98789 -12.58000 -12.49838 -12.27602 -12.00178 -11.90519 -11.89685 -11.56887 -11.38100 -11.01303 -10.68951 -10.27778 -10.07682 -9.90237 -9.69957 -9.45591 -5.23949 -0.60927 -0.21548 0.41814 0.66924 1.01869 1.03921 1.09067 1.39044 1.60300 1.75137 2.02823 2.19141 2.26629 3.05221 3.22282 3.32585 3.35719 3.56770 3.69925 3.80870 3.85013 3.94427 3.96434 4.08988 4.19645 4.25832 4.28411 4.36618 4.56101 4.61880 4.65328 4.70736 4.75534 4.86874 4.89099 4.93983 5.09696 5.16790 5.18557 5.51857 5.80323 6.12347 6.12721 6.45411 6.85877 7.21526 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.522 6.522 2 C -0.031 4.031 3 Si 0.647 3.353 4 C -0.234 4.234 5 C -0.071 4.071 6 C -0.160 4.160 7 C 0.577 3.423 8 O -0.517 6.517 9 N -0.714 5.714 10 C 0.124 3.876 11 H 0.118 0.882 12 C -0.138 4.138 13 C -0.118 4.118 14 H 0.100 0.900 15 C 0.145 3.855 16 N -0.373 5.373 17 C 0.050 3.950 18 C -0.274 4.274 19 C 0.042 3.958 20 N -0.289 5.289 21 C -0.134 4.134 22 C -0.115 4.115 23 Cl 0.027 6.973 24 S 0.238 5.762 25 H 0.380 0.620 26 H 0.132 0.868 27 H -0.236 1.236 28 H -0.230 1.230 29 H 0.157 0.843 30 H 0.400 0.600 31 H 0.090 0.910 32 H 0.081 0.919 33 H 0.086 0.914 34 H 0.098 0.902 35 H 0.172 0.828 36 H 0.147 0.853 37 H 0.182 0.818 38 H 0.077 0.923 39 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.232 -0.182 5.969 5.977 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.143 4.143 3 Si 0.545 3.455 4 C -0.352 4.352 5 C -0.100 4.100 6 C -0.179 4.179 7 C 0.362 3.638 8 O -0.393 6.393 9 N -0.365 5.365 10 C 0.019 3.981 11 H 0.136 0.864 12 C -0.176 4.176 13 C -0.138 4.138 14 H 0.118 0.882 15 C 0.024 3.976 16 N -0.155 5.155 17 C -0.096 4.096 18 C -0.304 4.304 19 C -0.145 4.145 20 N -0.110 5.110 21 C -0.172 4.172 22 C -0.261 4.261 23 Cl 0.056 6.944 24 S 0.503 5.497 25 H 0.228 0.772 26 H 0.149 0.851 27 H -0.160 1.160 28 H -0.153 1.153 29 H 0.174 0.826 30 H 0.235 0.765 31 H 0.109 0.891 32 H 0.100 0.900 33 H 0.104 0.896 34 H 0.116 0.884 35 H 0.190 0.810 36 H 0.164 0.836 37 H 0.199 0.801 38 H 0.096 0.904 39 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 1.763 2.826 5.500 6.430 hybrid contribution -2.153 -2.545 -0.083 3.334 sum -0.390 0.281 5.417 5.439 Atomic orbital electron populations 1.86634 1.16937 1.79887 1.49396 1.24393 0.83986 1.10079 0.95869 0.95252 0.91623 0.75100 0.83569 1.24750 1.08057 0.99208 1.03139 1.20984 0.99355 0.95047 0.94635 1.20245 1.04582 0.95553 0.97481 1.17439 0.78650 0.83554 0.84169 1.90882 1.46638 1.79995 1.21817 1.45785 1.52888 1.11535 1.26300 1.22526 0.98713 0.80347 0.96466 0.86395 1.23386 0.99441 0.97472 0.97350 1.22622 0.94672 0.97771 0.98727 0.88181 1.21737 0.90263 0.97983 0.87654 1.48737 1.41149 1.10553 1.15078 1.22605 0.98595 0.87832 1.00570 1.21557 1.11035 1.01573 0.96224 1.23952 0.98270 0.91813 1.00428 1.77399 1.17732 1.22587 0.93327 1.23444 0.96822 0.94785 1.02180 1.25553 1.02878 1.00858 0.96859 1.98444 1.72915 1.97020 1.26002 1.83358 1.46487 1.08329 1.11539 0.77207 0.85057 1.16007 1.15272 0.82594 0.76493 0.89105 0.89982 0.89625 0.88365 0.81049 0.83566 0.80109 0.90380 0.89582 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.68 12.85 -35.23 -0.45 0.22 16 2 C -0.03 0.08 2.95 36.01 0.11 0.18 16 3 Si 0.65 -1.65 30.91 -169.99 -5.25 -6.91 16 4 C -0.23 0.40 5.68 -36.20 -0.21 0.19 16 5 C -0.07 0.09 9.71 -39.00 -0.38 -0.29 16 6 C -0.16 -0.21 5.98 -104.58 -0.63 -0.84 16 7 C 0.58 1.59 7.79 -12.69 -0.10 1.49 16 8 O -0.52 -3.27 14.51 5.23 0.08 -3.20 16 9 N -0.71 0.30 5.34 -54.21 -0.29 0.01 16 10 C 0.12 -0.05 4.24 -67.12 -0.28 -0.34 16 11 H 0.12 0.19 7.46 -51.93 -0.39 -0.20 16 12 C -0.14 0.42 7.39 -25.92 -0.19 0.23 16 13 C -0.12 0.19 3.83 -89.81 -0.34 -0.16 16 14 H 0.10 -0.02 8.14 -51.93 -0.42 -0.44 16 15 C 0.14 -0.27 6.35 -4.04 -0.03 -0.29 16 16 N -0.37 -0.47 3.68 -61.37 -0.23 -0.69 16 17 C 0.05 0.01 11.45 -17.22 -0.20 -0.18 16 18 C -0.27 -0.31 10.80 -40.02 -0.43 -0.74 16 19 C 0.04 0.09 12.03 -17.37 -0.21 -0.12 16 20 N -0.29 -1.05 12.42 30.62 0.38 -0.67 16 21 C -0.13 0.00 7.43 -25.92 -0.19 -0.19 16 22 C -0.11 -0.21 6.87 30.01 0.21 0.00 16 23 Cl 0.03 0.09 27.20 -51.86 -1.41 -1.32 16 24 S 0.24 -0.23 20.17 -107.50 -2.17 -2.40 16 25 H 0.38 -1.45 8.70 45.56 0.40 -1.05 16 26 H 0.13 -0.49 7.96 -51.93 -0.41 -0.91 16 27 H -0.24 0.18 7.11 56.52 0.40 0.59 16 28 H -0.23 -0.06 7.11 56.52 0.40 0.35 16 29 H 0.16 -0.53 7.10 -52.49 -0.37 -0.90 16 30 H 0.40 -1.24 7.27 -40.82 -0.30 -1.53 16 31 H 0.09 -0.42 8.08 -51.93 -0.42 -0.84 16 32 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 33 H 0.09 -0.19 7.84 -51.93 -0.41 -0.60 16 34 H 0.10 -0.42 8.07 -51.93 -0.42 -0.84 16 35 H 0.17 -0.52 8.06 -52.49 -0.42 -0.95 16 36 H 0.15 -0.09 8.06 -52.48 -0.42 -0.52 16 37 H 0.18 -0.04 8.06 -52.49 -0.42 -0.46 16 38 H 0.08 0.19 8.14 -51.93 -0.42 -0.23 16 39 H 0.09 -0.01 7.90 -51.93 -0.41 -0.42 16 LS Contribution 362.74 15.07 5.47 5.47 Total: 0.00 -8.97 362.74 -11.21 -20.18 By element: Atomic # 1 Polarization: -5.18 SS G_CDS: -4.46 Total: -9.65 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: -2.87 Total: -1.05 kcal Atomic # 7 Polarization: -1.22 SS G_CDS: -0.13 Total: -1.35 kcal Atomic # 8 Polarization: -2.60 SS G_CDS: -0.38 Total: -2.97 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.25 Total: -6.91 kcal Atomic # 16 Polarization: -0.23 SS G_CDS: -2.17 Total: -2.40 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -1.41 Total: -1.32 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -8.97 -11.21 -20.18 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.172 kcal (2) G-P(sol) polarization free energy of solvation -8.968 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 86.205 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.214 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.182 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.990 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds