Wall clock time and date at job start Sun Mar 7 2021 02:35:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86302 * 109.47039 * 2 1 4 4 C 1.50699 * 109.47144 * 119.99426 * 2 1 3 5 5 C 1.31113 * 118.54742 * 249.98417 * 4 2 1 6 6 N 1.38971 * 121.86619 * 179.68400 * 5 4 2 7 7 C 1.47020 * 118.86205 * 13.17853 * 6 5 4 8 8 C 1.50701 * 109.82608 * 196.87757 * 7 6 5 9 9 O 1.21282 * 119.99329 * 19.13327 * 8 7 6 10 10 N 1.34775 * 120.00089 * 199.13981 * 8 7 6 11 11 C 1.46507 * 119.99718 * 179.97438 * 10 8 7 12 12 H 1.08998 * 112.84650 * 336.19016 * 11 10 8 13 13 C 1.53958 * 113.66388 * 107.43436 * 11 10 8 14 14 C 1.53784 * 87.01508 * 139.93325 * 13 11 10 15 15 H 1.08997 * 113.62089 * 89.22776 * 14 13 11 16 16 C 1.52999 * 113.61473 * 220.05031 * 14 13 11 17 17 N 1.46501 * 109.46864 * 274.13463 * 16 14 13 18 18 C 1.34953 * 126.03725 * 125.00110 * 17 16 14 19 19 C 1.35312 * 107.74266 * 180.20624 * 18 17 16 20 20 C 1.39863 * 107.92527 * 359.64076 * 19 18 17 21 21 N 1.30837 * 108.19940 * 0.36269 * 20 19 18 22 22 C 1.53773 * 113.61045 * 204.99405 * 11 10 8 23 23 C 1.53550 * 107.70982 * 316.44831 * 7 6 5 24 24 C 1.50205 * 118.54370 * 69.99942 * 4 2 1 25 25 H 0.96704 * 113.99682 * 60.00814 * 1 2 3 26 26 H 1.09000 * 109.47771 * 239.99789 * 2 1 3 27 27 H 1.48505 * 109.99916 * 298.67587 * 3 2 1 28 28 H 1.48498 * 110.00421 * 59.99608 * 3 2 1 29 29 H 1.08002 * 119.07802 * 359.59087 * 5 4 2 30 30 H 0.97006 * 120.57917 * 193.28011 * 6 5 4 31 31 H 1.09002 * 109.82624 * 76.01602 * 7 6 5 32 32 H 0.96995 * 120.00418 * 359.97438 * 10 8 7 33 33 H 1.08991 * 113.61449 * 25.41643 * 13 11 10 34 34 H 1.08990 * 113.66478 * 254.45288 * 13 11 10 35 35 H 1.08998 * 109.47551 * 154.13826 * 16 14 13 36 36 H 1.09002 * 109.47429 * 34.13320 * 16 14 13 37 37 H 1.08002 * 126.12372 * 359.93597 * 18 17 16 38 38 H 1.08008 * 126.03698 * 179.76435 * 19 18 17 39 39 H 1.08001 * 125.90034 * 180.14354 * 20 19 18 40 40 H 1.09008 * 113.61408 * 105.47019 * 22 11 10 41 41 H 1.08998 * 113.69551 * 334.57869 * 22 11 10 42 42 H 1.09001 * 109.62129 * 180.64284 * 23 7 6 43 43 H 1.08995 * 109.61858 * 301.19417 * 23 7 6 44 44 H 1.09006 * 109.32614 * 79.77352 * 24 4 2 45 45 H 1.08995 * 109.33261 * 320.29230 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.5119 -0.0027 2.1693 6 7 2.9945 -0.5856 3.3349 7 6 3.1183 -2.0492 3.3978 8 6 3.2524 -2.4896 4.8327 9 8 2.9070 -1.7492 5.7290 10 7 3.7563 -3.7062 5.1200 11 6 3.8871 -4.1341 6.5151 12 1 3.9489 -3.2970 7.2104 13 6 2.8643 -5.2071 6.9309 14 6 4.0054 -5.8758 7.7155 15 1 4.0998 -5.5168 8.7402 16 6 4.0030 -7.4028 7.6188 17 7 3.1146 -7.9555 8.6443 18 6 2.0813 -8.7967 8.4300 19 6 1.5142 -9.0670 9.6284 20 6 2.2302 -8.3735 10.6096 21 7 3.1879 -7.7045 10.0205 22 6 4.9756 -5.1981 6.7334 23 6 1.8463 -2.6524 2.7847 24 6 1.7451 -2.1976 1.3270 25 1 -0.3933 0.4416 -0.7652 26 1 1.7925 -0.5138 -0.8899 27 1 1.5879 2.4585 -1.2243 28 1 1.5614 2.4680 1.2084 29 1 2.6194 1.0632 2.0325 30 1 3.2441 -0.0364 4.0946 31 1 3.9910 -2.3712 2.8294 32 1 4.0322 -4.2985 4.4032 33 1 2.4974 -5.8066 6.0978 34 1 2.0637 -4.8260 7.5646 35 1 5.0144 -7.7783 7.7737 36 1 3.6506 -7.7039 6.6322 37 1 1.7615 -9.1815 7.4728 38 1 0.6607 -9.7069 9.7977 39 1 2.0254 -8.3852 11.6700 40 1 5.8769 -4.8098 7.2080 41 1 5.1880 -5.7958 5.8470 42 1 1.9004 -3.7402 2.8260 43 1 0.9735 -2.3054 3.3378 44 1 2.5156 -2.6966 0.7391 45 1 0.7646 -2.4648 0.9330 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:35:50 Heat of formation + Delta-G solvation = 65.260724 kcal Electronic energy + Delta-G solvation = -26195.863275 eV Core-core repulsion = 22410.921650 eV Total energy + Delta-G solvation = -3784.941625 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.168 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.09269 -41.53406 -40.26994 -39.06244 -37.43104 -35.27574 -33.76644 -33.29181 -32.81039 -30.97012 -28.79306 -27.46150 -26.93822 -25.42849 -24.37917 -23.36992 -22.06677 -21.84793 -21.55842 -20.62329 -19.14643 -19.07542 -18.36178 -18.27141 -17.62110 -17.31307 -16.58825 -16.34255 -16.21854 -15.85162 -15.43540 -15.25984 -15.05979 -14.70275 -14.64119 -14.39668 -14.36071 -14.03299 -13.78157 -13.77012 -13.68808 -13.43705 -13.32100 -13.11126 -13.00540 -12.48955 -12.39887 -12.00525 -11.68635 -11.63511 -11.62936 -11.50018 -11.28184 -10.80079 -10.30204 -10.24940 -10.18869 -9.46922 -8.44821 -4.91473 1.00943 1.32223 1.39058 1.45444 1.57029 1.63129 1.83992 2.00188 2.01939 2.59243 3.20813 3.30955 3.36416 3.46144 3.54075 3.60864 3.72061 3.79789 3.93664 3.95298 3.97192 4.01436 4.19013 4.21839 4.32988 4.37068 4.41701 4.49206 4.54256 4.57664 4.62073 4.71572 4.73156 4.81045 4.85982 4.90732 5.01037 5.09037 5.15165 5.16608 5.29262 5.37983 5.57147 5.77496 6.09872 6.20773 6.37097 6.60671 6.82201 6.82308 7.04026 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.049 4.049 3 Si 0.663 3.337 4 C -0.232 4.232 5 C 0.142 3.858 6 N -0.731 5.731 7 C 0.136 3.864 8 C 0.513 3.487 9 O -0.529 6.529 10 N -0.716 5.716 11 C 0.125 3.875 12 H 0.118 0.882 13 C -0.146 4.146 14 C -0.120 4.120 15 H 0.110 0.890 16 C 0.146 3.854 17 N -0.371 5.371 18 C 0.052 3.948 19 C -0.275 4.275 20 C 0.044 3.956 21 N -0.295 5.295 22 C -0.136 4.136 23 C -0.126 4.126 24 C -0.054 4.054 25 H 0.374 0.626 26 H 0.065 0.935 27 H -0.265 1.265 28 H -0.259 1.259 29 H 0.135 0.865 30 H 0.410 0.590 31 H 0.093 0.907 32 H 0.403 0.597 33 H 0.086 0.914 34 H 0.074 0.926 35 H 0.087 0.913 36 H 0.096 0.904 37 H 0.172 0.828 38 H 0.147 0.853 39 H 0.183 0.817 40 H 0.083 0.917 41 H 0.091 0.909 42 H 0.078 0.922 43 H 0.076 0.924 44 H 0.067 0.933 45 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.890 -4.105 -4.699 7.353 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.160 4.160 3 Si 0.566 3.434 4 C -0.242 4.242 5 C 0.021 3.979 6 N -0.364 5.364 7 C 0.026 3.974 8 C 0.299 3.701 9 O -0.404 6.404 10 N -0.367 5.367 11 C 0.020 3.980 12 H 0.136 0.864 13 C -0.185 4.185 14 C -0.140 4.140 15 H 0.128 0.872 16 C 0.024 3.976 17 N -0.154 5.154 18 C -0.094 4.094 19 C -0.304 4.304 20 C -0.142 4.142 21 N -0.117 5.117 22 C -0.175 4.175 23 C -0.164 4.164 24 C -0.091 4.091 25 H 0.221 0.779 26 H 0.083 0.917 27 H -0.190 1.190 28 H -0.184 1.184 29 H 0.151 0.849 30 H 0.247 0.753 31 H 0.110 0.890 32 H 0.238 0.762 33 H 0.105 0.895 34 H 0.092 0.908 35 H 0.106 0.894 36 H 0.114 0.886 37 H 0.189 0.811 38 H 0.165 0.835 39 H 0.200 0.800 40 H 0.102 0.898 41 H 0.110 0.890 42 H 0.097 0.903 43 H 0.094 0.906 44 H 0.086 0.914 45 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 4.627 -2.303 -3.462 6.221 hybrid contribution -1.740 -0.835 -0.736 2.066 sum 2.887 -3.138 -4.199 5.984 Atomic orbital electron populations 1.86614 1.18881 1.79867 1.49357 1.24492 0.83666 1.09254 0.98619 0.95499 0.92252 0.75858 0.79803 1.19879 1.09752 0.95994 0.98588 1.20414 0.94399 0.96625 0.86415 1.44255 1.72700 1.04066 1.15400 1.21020 1.00087 0.83593 0.92671 1.20678 0.76665 0.81689 0.91106 1.90746 1.47961 1.53370 1.48300 1.45914 1.64904 1.17319 1.08602 1.22518 0.96099 0.96213 0.83141 0.86425 1.23579 0.97469 0.97534 0.99887 1.22701 0.97398 0.93142 1.00728 0.87213 1.21725 0.93955 0.93407 0.88466 1.48700 1.24684 1.36214 1.05759 1.22579 0.90801 0.95439 1.00623 1.21560 1.06635 1.10481 0.91727 1.23933 0.93674 0.95981 1.00588 1.77339 1.23309 1.23898 0.87123 1.23364 0.97753 0.96865 0.99528 1.21851 0.96731 1.00292 0.97575 1.19977 1.02443 0.92064 0.94655 0.77926 0.91655 1.19021 1.18448 0.84867 0.75311 0.88969 0.76200 0.89539 0.90755 0.89438 0.88551 0.81098 0.83539 0.80038 0.89835 0.89030 0.90346 0.90573 0.91414 0.90425 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.12 12.86 -35.23 -0.45 -1.57 16 2 C -0.05 -0.02 2.80 36.01 0.10 0.08 16 3 Si 0.66 -0.19 29.91 -169.99 -5.08 -5.27 16 4 C -0.23 -0.23 5.40 -101.34 -0.55 -0.78 16 5 C 0.14 0.11 9.62 -16.06 -0.15 -0.04 16 6 N -0.73 -0.46 5.47 -55.33 -0.30 -0.76 16 7 C 0.14 -0.12 3.36 -68.51 -0.23 -0.35 16 8 C 0.51 0.26 7.09 -10.99 -0.08 0.18 16 9 O -0.53 -2.55 15.68 5.56 0.09 -2.46 16 10 N -0.72 1.75 5.36 -52.93 -0.28 1.47 16 11 C 0.13 -0.21 4.24 -67.03 -0.28 -0.49 16 12 H 0.12 0.08 7.46 -51.93 -0.39 -0.31 16 13 C -0.15 0.24 7.45 -25.82 -0.19 0.05 16 14 C -0.12 0.25 3.85 -89.80 -0.35 -0.10 16 15 H 0.11 0.02 7.99 -51.93 -0.41 -0.39 16 16 C 0.15 -0.34 6.33 -4.04 -0.03 -0.36 16 17 N -0.37 -0.35 3.68 -61.36 -0.23 -0.57 16 18 C 0.05 0.00 11.45 -17.22 -0.20 -0.19 16 19 C -0.27 -0.26 10.80 -40.02 -0.43 -0.69 16 20 C 0.04 0.09 12.03 -17.37 -0.21 -0.12 16 21 N -0.30 -1.01 12.29 30.62 0.38 -0.63 16 22 C -0.14 0.51 7.39 -25.92 -0.19 0.32 16 23 C -0.13 0.08 5.47 -26.43 -0.14 -0.06 16 24 C -0.05 0.01 5.85 -28.10 -0.16 -0.16 16 25 H 0.37 -0.63 8.74 45.56 0.40 -0.23 16 26 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 27 H -0.26 -0.54 7.11 56.52 0.40 -0.13 16 28 H -0.26 -0.75 6.89 56.52 0.39 -0.36 16 29 H 0.13 -0.03 4.34 -52.49 -0.23 -0.26 16 30 H 0.41 0.36 8.10 -40.82 -0.33 0.03 16 31 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 32 H 0.40 -2.18 8.73 -40.82 -0.36 -2.54 16 33 H 0.09 -0.24 7.92 -51.93 -0.41 -0.65 16 34 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 35 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 36 H 0.10 -0.46 7.80 -51.93 -0.41 -0.87 16 37 H 0.17 -0.56 8.06 -52.49 -0.42 -0.98 16 38 H 0.15 -0.12 8.06 -52.48 -0.42 -0.54 16 39 H 0.18 -0.10 8.06 -52.49 -0.42 -0.52 16 40 H 0.08 -0.29 8.14 -51.92 -0.42 -0.71 16 41 H 0.09 -0.52 8.08 -51.93 -0.42 -0.93 16 42 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 43 H 0.08 0.15 8.14 -51.93 -0.42 -0.28 16 44 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 45 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 LS Contribution 368.81 15.07 5.56 5.56 Total: 0.00 -10.11 368.81 -10.25 -20.37 By element: Atomic # 1 Polarization: -6.58 SS G_CDS: -6.83 Total: -13.41 kcal Atomic # 6 Polarization: 0.38 SS G_CDS: -3.10 Total: -2.72 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: -0.44 Total: -0.49 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -0.37 Total: -4.03 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: -5.08 Total: -5.27 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -10.11 -10.25 -20.37 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.626 kcal (2) G-P(sol) polarization free energy of solvation -10.114 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.513 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.365 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.261 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds