Wall clock time and date at job start Sun Mar 7 2021 02:35:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86292 * 109.47232 * 2 1 4 4 C 1.50702 * 109.46824 * 120.00025 * 2 1 3 5 5 C 1.31112 * 118.54809 * 340.97899 * 4 2 1 6 6 N 1.38927 * 121.84643 * 179.61600 * 5 4 2 7 7 C 1.47031 * 118.88391 * 13.29647 * 6 5 4 8 8 C 1.53566 * 107.64599 * 316.32175 * 7 6 5 9 9 C 1.50210 * 118.54354 * 160.95609 * 4 2 1 10 10 C 1.50696 * 109.33063 * 320.31412 * 9 4 2 11 11 O 1.21284 * 119.99885 * 275.48319 * 10 9 4 12 12 N 1.34773 * 120.00390 * 95.48323 * 10 9 4 13 13 C 1.46499 * 120.00157 * 179.97438 * 12 10 9 14 14 H 1.08991 * 112.90751 * 23.75573 * 13 12 10 15 15 C 1.53783 * 113.61326 * 155.00529 * 13 12 10 16 16 C 1.53774 * 87.17514 * 139.93961 * 15 13 12 17 17 H 1.09002 * 113.61511 * 89.15810 * 16 15 13 18 18 C 1.53001 * 113.61550 * 220.05760 * 16 15 13 19 19 N 1.46498 * 109.46905 * 184.99872 * 18 16 15 20 20 C 1.34949 * 126.03352 * 124.72409 * 19 18 16 21 21 C 1.35318 * 107.74219 * 179.83648 * 20 19 18 22 22 C 1.39860 * 107.92146 * 0.41843 * 21 20 19 23 23 N 1.30834 * 108.20427 * 359.74014 * 22 21 20 24 24 C 1.53778 * 113.61409 * 252.49823 * 13 12 10 25 25 H 0.96700 * 114.00221 * 176.90386 * 1 2 3 26 26 H 1.08997 * 109.46744 * 239.99677 * 2 1 3 27 27 H 1.48506 * 110.00254 * 179.97438 * 3 2 1 28 28 H 1.48505 * 110.00310 * 301.31909 * 3 2 1 29 29 H 1.07993 * 119.07920 * 359.59493 * 5 4 2 30 30 H 0.97001 * 120.55754 * 193.27253 * 6 5 4 31 31 H 1.08996 * 109.82423 * 75.87326 * 7 6 5 32 32 H 1.09002 * 109.82053 * 196.73477 * 7 6 5 33 33 H 1.08998 * 109.63569 * 301.25388 * 8 7 6 34 34 H 1.08993 * 109.62092 * 180.68873 * 8 7 6 35 35 H 1.09006 * 109.32399 * 79.96557 * 9 4 2 36 36 H 0.97008 * 119.99752 * 0.02562 * 12 10 9 37 37 H 1.09004 * 113.61379 * 254.53194 * 15 13 12 38 38 H 1.09002 * 113.61657 * 25.34465 * 15 13 12 39 39 H 1.09000 * 109.47185 * 305.00398 * 18 16 15 40 40 H 1.08997 * 109.46719 * 64.99794 * 18 16 15 41 41 H 1.08002 * 126.12762 * 359.97438 * 20 19 18 42 42 H 1.08008 * 126.03766 * 180.15948 * 21 20 19 43 43 H 1.08006 * 125.89922 * 179.75821 * 22 21 20 44 44 H 1.08997 * 113.61884 * 334.56672 * 24 13 12 45 45 H 1.09003 * 113.61305 * 105.39284 * 24 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.1135 -0.8622 2.2440 6 7 1.5021 -1.5130 3.4084 7 6 2.9307 -1.7819 3.6287 8 6 3.5163 -2.2992 2.3067 9 6 3.3465 -1.2138 1.2412 10 6 3.6827 -1.7859 -0.1117 11 8 3.3893 -2.9329 -0.3751 12 7 4.3095 -1.0231 -1.0292 13 6 4.6369 -1.5795 -2.3442 14 1 3.9987 -2.4188 -2.6206 15 6 4.7685 -0.5163 -3.4475 16 6 5.9682 -1.3212 -3.9744 17 1 5.6947 -2.0898 -4.6973 18 6 7.1328 -0.4480 -4.4456 19 7 8.1712 -1.2960 -5.0360 20 6 8.6916 -1.1678 -6.2745 21 6 9.6214 -2.1380 -6.4336 22 6 9.6641 -2.8905 -5.2554 23 7 8.7953 -2.3867 -4.4170 24 6 6.1369 -1.8554 -2.5403 25 1 -0.3933 -0.8821 -0.0477 26 1 1.7923 -0.5139 -0.8900 27 1 3.5350 1.7701 0.0006 28 1 1.5355 2.4771 -1.1921 29 1 0.1099 -0.4701 2.1720 30 1 0.8420 -1.7850 4.0650 31 1 3.4384 -0.8638 3.9240 32 1 3.0491 -2.5362 4.4066 33 1 2.9860 -3.2003 1.9989 34 1 4.5754 -2.5211 2.4375 35 1 4.0218 -0.3869 1.4613 36 1 4.5445 -0.1058 -0.8184 37 1 3.9226 -0.4931 -4.1347 38 1 5.0362 0.4714 -3.0724 39 1 6.7759 0.2622 -5.1915 40 1 7.5466 0.0950 -3.5959 41 1 8.4169 -0.4229 -7.0067 42 1 10.2214 -2.3046 -7.3161 43 1 10.3041 -3.7405 -5.0697 44 1 6.7803 -1.2341 -1.9174 45 1 6.3961 -2.9131 -2.4937 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:35:54 Heat of formation + Delta-G solvation = 56.863534 kcal Electronic energy + Delta-G solvation = -27095.482370 eV Core-core repulsion = 23310.176615 eV Total energy + Delta-G solvation = -3785.305754 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.168 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.06373 -41.53446 -40.23423 -38.84016 -37.50102 -35.11394 -33.88836 -33.09867 -32.34192 -30.92927 -28.67326 -27.13824 -26.81103 -26.23308 -24.01334 -23.09472 -21.92505 -21.80405 -21.43130 -20.76911 -19.27032 -18.73384 -18.28042 -18.06126 -17.96171 -17.15619 -16.57184 -16.27087 -15.75009 -15.70704 -15.38743 -15.18957 -15.02735 -14.95840 -14.72483 -14.45327 -14.07925 -13.93316 -13.83697 -13.65113 -13.56113 -13.46636 -13.15618 -12.98933 -12.54003 -12.33616 -12.21952 -12.08326 -11.90960 -11.61486 -11.57632 -11.39717 -11.12929 -10.98337 -10.59831 -10.29009 -10.01289 -9.46909 -8.32399 -4.85413 1.02528 1.23345 1.52203 1.58300 1.63299 1.72693 2.01519 2.08414 2.27794 2.60054 3.20140 3.34478 3.51250 3.56741 3.67493 3.72707 3.87521 3.92379 3.95020 4.01630 4.07289 4.12611 4.19652 4.25157 4.27127 4.41431 4.46956 4.51160 4.54461 4.60011 4.66926 4.72865 4.74398 4.75496 4.86718 4.92506 5.06654 5.15611 5.17440 5.24672 5.28251 5.46394 5.52577 5.79023 6.11194 6.37531 6.47871 6.60844 6.84498 6.85315 7.27441 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.052 4.052 3 Si 0.741 3.259 4 C -0.295 4.295 5 C 0.166 3.834 6 N -0.751 5.751 7 C 0.121 3.879 8 C -0.124 4.124 9 C -0.042 4.042 10 C 0.526 3.474 11 O -0.533 6.533 12 N -0.726 5.726 13 C 0.120 3.880 14 H 0.116 0.884 15 C -0.141 4.141 16 C -0.118 4.118 17 H 0.100 0.900 18 C 0.145 3.855 19 N -0.372 5.372 20 C 0.050 3.950 21 C -0.274 4.274 22 C 0.042 3.958 23 N -0.289 5.289 24 C -0.133 4.133 25 H 0.365 0.635 26 H 0.063 0.937 27 H -0.255 1.255 28 H -0.259 1.259 29 H 0.146 0.854 30 H 0.403 0.597 31 H 0.062 0.938 32 H 0.081 0.919 33 H 0.084 0.916 34 H 0.076 0.924 35 H 0.084 0.916 36 H 0.398 0.602 37 H 0.081 0.919 38 H 0.089 0.911 39 H 0.098 0.902 40 H 0.086 0.914 41 H 0.172 0.828 42 H 0.147 0.853 43 H 0.182 0.818 44 H 0.085 0.915 45 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.111 4.243 1.758 4.594 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.162 4.162 3 Si 0.640 3.360 4 C -0.306 4.306 5 C 0.044 3.956 6 N -0.381 5.381 7 C -0.004 4.004 8 C -0.163 4.163 9 C -0.063 4.063 10 C 0.313 3.687 11 O -0.408 6.408 12 N -0.378 5.378 13 C 0.015 3.985 14 H 0.134 0.866 15 C -0.180 4.180 16 C -0.137 4.137 17 H 0.118 0.882 18 C 0.024 3.976 19 N -0.155 5.155 20 C -0.096 4.096 21 C -0.304 4.304 22 C -0.144 4.144 23 N -0.111 5.111 24 C -0.171 4.171 25 H 0.213 0.787 26 H 0.080 0.920 27 H -0.180 1.180 28 H -0.183 1.183 29 H 0.163 0.837 30 H 0.237 0.763 31 H 0.080 0.920 32 H 0.100 0.900 33 H 0.103 0.897 34 H 0.095 0.905 35 H 0.102 0.898 36 H 0.234 0.766 37 H 0.099 0.901 38 H 0.107 0.893 39 H 0.116 0.884 40 H 0.104 0.896 41 H 0.190 0.810 42 H 0.165 0.835 43 H 0.199 0.801 44 H 0.104 0.896 45 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -0.256 4.646 2.421 5.245 hybrid contribution 0.391 -1.165 -1.340 1.818 sum 0.135 3.481 1.081 3.648 Atomic orbital electron populations 1.86683 1.17756 1.33598 1.96890 1.25087 0.83936 1.11688 0.95532 0.92617 0.78400 0.77507 0.87463 1.20271 0.96536 1.15380 0.98389 1.20378 0.98517 0.91505 0.85233 1.44611 1.07290 1.64603 1.21553 1.21585 0.81762 1.00257 0.96768 1.21785 1.01963 0.98383 0.94168 1.19671 0.95837 0.98446 0.92364 1.20644 0.75993 0.85942 0.86164 1.90700 1.52546 1.17827 1.79775 1.46245 1.60854 1.16138 1.14525 1.22504 0.96734 0.97473 0.81753 0.86574 1.23400 0.98219 0.98435 0.97919 1.22648 0.94246 0.98802 0.98021 0.88175 1.21731 0.85436 0.90971 0.99494 1.48729 1.31178 1.24582 1.11011 1.22610 0.97170 1.01145 0.88670 1.21559 1.06423 1.00909 1.01487 1.23952 0.97821 1.00321 0.92344 1.77396 1.11704 1.00265 1.21720 1.23457 0.95938 1.02934 0.94801 0.78689 0.91973 1.17954 1.18321 0.83692 0.76320 0.91978 0.90013 0.89688 0.90538 0.89787 0.76648 0.90051 0.89265 0.88361 0.89609 0.81049 0.83539 0.80085 0.89618 0.90396 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.34 11.14 -35.23 -0.39 -0.73 16 2 C -0.05 -0.03 2.48 36.01 0.09 0.06 16 3 Si 0.74 -0.30 32.77 -169.99 -5.57 -5.87 16 4 C -0.30 -0.10 4.08 -101.33 -0.41 -0.52 16 5 C 0.17 -0.10 10.19 -16.08 -0.16 -0.27 16 6 N -0.75 1.15 5.83 -60.67 -0.35 0.80 16 7 C 0.12 -0.20 7.16 -3.46 -0.02 -0.23 16 8 C -0.12 -0.05 5.31 -26.42 -0.14 -0.19 16 9 C -0.04 -0.03 2.34 -93.14 -0.22 -0.25 16 10 C 0.53 1.42 5.26 -10.99 -0.06 1.36 16 11 O -0.53 -3.56 15.70 5.55 0.09 -3.48 16 12 N -0.73 -0.37 5.07 -53.02 -0.27 -0.64 16 13 C 0.12 0.05 4.24 -67.12 -0.28 -0.23 16 14 H 0.12 0.28 7.47 -51.93 -0.39 -0.11 16 15 C -0.14 0.27 7.39 -25.92 -0.19 0.08 16 16 C -0.12 0.10 3.83 -89.72 -0.34 -0.24 16 17 H 0.10 0.03 8.14 -51.93 -0.42 -0.39 16 18 C 0.15 -0.19 6.35 -4.04 -0.03 -0.22 16 19 N -0.37 -0.58 3.68 -61.37 -0.23 -0.81 16 20 C 0.05 0.03 11.45 -17.22 -0.20 -0.17 16 21 C -0.27 -0.35 10.80 -40.02 -0.43 -0.79 16 22 C 0.04 0.10 12.02 -17.37 -0.21 -0.11 16 23 N -0.29 -1.10 12.42 30.62 0.38 -0.72 16 24 C -0.13 -0.07 7.44 -25.83 -0.19 -0.27 16 25 H 0.37 -0.55 9.01 45.56 0.41 -0.14 16 26 H 0.06 0.12 6.36 -51.93 -0.33 -0.21 16 27 H -0.25 0.14 6.70 56.52 0.38 0.52 16 28 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 29 H 0.15 -0.25 6.86 -52.49 -0.36 -0.61 16 30 H 0.40 -1.29 8.96 -40.82 -0.37 -1.66 16 31 H 0.06 -0.13 8.14 -51.93 -0.42 -0.56 16 32 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 33 H 0.08 0.25 7.51 -51.93 -0.39 -0.14 16 34 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.08 -0.07 8.04 -51.93 -0.42 -0.49 16 36 H 0.40 -0.48 7.94 -40.82 -0.32 -0.80 16 37 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 38 H 0.09 -0.28 8.08 -51.93 -0.42 -0.70 16 39 H 0.10 -0.36 8.07 -51.93 -0.42 -0.78 16 40 H 0.09 -0.14 7.85 -51.93 -0.41 -0.55 16 41 H 0.17 -0.47 8.06 -52.49 -0.42 -0.90 16 42 H 0.15 -0.08 8.06 -52.48 -0.42 -0.50 16 43 H 0.18 -0.03 8.06 -52.48 -0.42 -0.45 16 44 H 0.09 0.03 7.90 -51.93 -0.41 -0.38 16 45 H 0.08 0.21 8.14 -51.93 -0.42 -0.21 16 LS Contribution 367.80 15.07 5.54 5.54 Total: 0.00 -8.42 367.80 -10.45 -18.87 By element: Atomic # 1 Polarization: -4.16 SS G_CDS: -6.85 Total: -11.01 kcal Atomic # 6 Polarization: 0.85 SS G_CDS: -2.80 Total: -1.96 kcal Atomic # 7 Polarization: -0.90 SS G_CDS: -0.47 Total: -1.37 kcal Atomic # 8 Polarization: -3.90 SS G_CDS: -0.31 Total: -4.20 kcal Atomic # 14 Polarization: -0.30 SS G_CDS: -5.57 Total: -5.87 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -8.42 -10.45 -18.87 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.730 kcal (2) G-P(sol) polarization free energy of solvation -8.415 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.314 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.451 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.866 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.864 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds