Wall clock time and date at job start Sun Mar 7 2021 02:36:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86302 * 109.46621 * 2 1 4 4 C 1.50696 * 109.46914 * 240.00318 * 2 1 3 5 5 C 1.38708 * 120.02796 * 284.99476 * 4 2 1 6 6 O 1.35900 * 120.05751 * 359.96075 * 5 4 2 7 7 C 1.42894 * 117.00370 * 180.02562 * 6 5 4 8 8 C 1.50699 * 109.47583 * 179.97438 * 7 6 5 9 9 O 1.21283 * 119.99341 * 359.97438 * 8 7 6 10 10 N 1.34776 * 120.00405 * 180.02562 * 8 7 6 11 11 C 1.46499 * 119.99941 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.85388 * 23.79874 * 11 10 8 13 13 C 1.53786 * 113.61357 * 154.99692 * 11 10 8 14 14 C 1.53780 * 87.08000 * 139.97941 * 13 11 10 15 15 H 1.08997 * 113.61536 * 89.11750 * 14 13 11 16 16 C 1.52998 * 113.61614 * 219.93758 * 14 13 11 17 17 N 1.46496 * 109.47353 * 185.00079 * 16 14 13 18 18 C 1.34949 * 126.03994 * 124.99777 * 17 16 14 19 19 C 1.35315 * 107.74959 * 179.97438 * 18 17 16 20 20 C 1.39870 * 107.91717 * 0.02562 * 19 18 17 21 21 N 1.30838 * 108.20316 * 359.73469 * 20 19 18 22 22 C 1.53784 * 113.60979 * 252.49337 * 11 10 8 23 23 C 1.38759 * 119.89010 * 179.97438 * 5 4 2 24 24 C 1.38119 * 119.94381 * 0.02562 * 23 5 4 25 25 C 1.38295 * 120.05704 * 359.97438 * 24 23 5 26 26 C 1.38171 * 120.03158 * 104.95308 * 4 2 1 27 27 H 0.96701 * 113.99868 * 299.99783 * 1 2 3 28 28 H 1.08999 * 109.47369 * 119.99832 * 2 1 3 29 29 H 1.48506 * 109.99736 * 178.68311 * 3 2 1 30 30 H 1.48502 * 110.00216 * 300.00095 * 3 2 1 31 31 H 1.09001 * 109.47181 * 300.00095 * 7 6 5 32 32 H 1.08998 * 109.47333 * 59.99666 * 7 6 5 33 33 H 0.97002 * 119.99581 * 359.97438 * 10 8 7 34 34 H 1.09000 * 113.61172 * 254.52470 * 13 11 10 35 35 H 1.09000 * 113.61382 * 25.34489 * 13 11 10 36 36 H 1.09010 * 109.46765 * 305.00036 * 16 14 13 37 37 H 1.09003 * 109.47160 * 64.99298 * 16 14 13 38 38 H 1.08001 * 126.12144 * 0.02562 * 18 17 16 39 39 H 1.07996 * 126.03769 * 179.97438 * 19 18 17 40 40 H 1.07997 * 125.89633 * 179.97438 * 20 19 18 41 41 H 1.08996 * 113.61765 * 334.56414 * 22 11 10 42 42 H 1.08996 * 113.61343 * 105.47750 * 22 11 10 43 43 H 1.08001 * 120.03003 * 179.97438 * 23 5 4 44 44 H 1.07997 * 119.97310 * 179.97438 * 24 23 5 45 45 H 1.07995 * 119.94657 * 179.74935 * 25 24 23 46 46 H 1.08005 * 119.97011 * 0.04236 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.8697 -2.0939 -1.3070 6 8 1.3572 -2.8107 -0.2724 7 6 1.3256 -4.2316 -0.4202 8 6 0.7297 -4.8524 0.8169 9 8 0.3682 -4.1473 1.7351 10 7 0.5995 -6.1911 0.9035 11 6 0.0197 -6.7944 2.1060 12 1 -0.6245 -6.1080 2.6555 13 6 -0.6172 -8.1720 1.8582 14 6 -0.0157 -8.6051 3.2056 15 1 -0.6690 -8.4142 4.0569 16 6 0.5478 -10.0274 3.1964 17 7 0.9862 -10.3878 4.5469 18 6 0.5881 -11.4695 5.2488 19 6 1.2205 -11.4408 6.4448 20 6 2.0324 -10.3024 6.4751 21 7 1.8969 -9.6732 5.3359 22 6 1.0496 -7.5170 2.9903 23 6 2.3325 -2.7450 -2.4416 24 6 2.8537 -2.0144 -3.4914 25 6 2.9140 -0.6350 -3.4128 26 6 2.4528 0.0161 -2.2838 27 1 -0.3933 0.4417 0.7651 28 1 1.7924 -0.5138 0.8900 29 1 3.5346 1.7704 0.0321 30 1 1.5613 2.4680 -1.2085 31 1 0.7185 -4.4933 -1.2869 32 1 2.3399 -4.6050 -0.5611 33 1 0.8890 -6.7549 0.1692 34 1 -1.7071 -8.1544 1.8521 35 1 -0.1976 -8.6993 1.0015 36 1 -0.2251 -10.7223 2.8677 37 1 1.3959 -10.0779 2.5134 38 1 -0.1095 -12.2234 4.9152 39 1 1.1159 -12.1681 7.2363 40 1 2.6652 -9.9975 7.2955 41 1 1.9259 -7.8660 2.4441 42 1 1.3053 -6.9707 3.8982 43 1 2.2860 -3.8223 -2.5034 44 1 3.2144 -2.5206 -4.3746 45 1 3.3256 -0.0657 -4.2330 46 1 2.5010 1.0934 -2.2248 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:36:02 Heat of formation + Delta-G solvation = 43.568097 kcal Electronic energy + Delta-G solvation = -28729.498450 eV Core-core repulsion = 24589.445220 eV Total energy + Delta-G solvation = -4140.053231 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.07603 -41.61426 -40.96489 -39.57620 -38.29665 -37.32744 -35.20421 -33.63466 -32.85748 -31.34219 -30.94861 -29.71069 -28.26448 -26.86503 -26.55798 -24.53505 -23.33822 -22.45513 -21.93623 -21.77174 -21.48815 -20.75692 -19.35009 -18.41732 -18.24086 -18.12803 -17.43936 -17.37870 -16.92857 -16.77681 -16.57436 -15.76619 -15.68002 -15.57243 -15.33988 -15.09266 -14.96936 -14.86280 -14.62978 -14.06511 -13.94154 -13.73929 -13.69566 -13.61004 -13.52058 -13.49303 -13.07453 -12.92157 -12.68063 -12.33425 -12.18443 -11.96965 -11.84450 -11.69215 -11.61502 -11.43006 -10.85269 -10.30789 -10.14283 -10.10419 -10.00321 -9.48321 -9.22084 -4.89465 0.18901 0.39093 1.00884 1.38614 1.44096 1.48068 1.58827 1.71244 2.00298 2.02628 2.54825 2.64237 3.16867 3.28805 3.42186 3.52280 3.56504 3.62817 3.72757 3.81432 3.87932 3.91330 3.92568 3.93491 4.04916 4.10095 4.15270 4.23693 4.25294 4.31007 4.47337 4.49353 4.56851 4.61845 4.64123 4.72386 4.82192 4.90510 4.94835 5.03721 5.09114 5.15145 5.23097 5.31372 5.41050 5.45209 5.65701 5.77705 6.09772 6.22150 6.37125 6.83003 6.83873 7.09322 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.062 4.062 3 Si 0.683 3.317 4 C -0.102 4.102 5 C 0.153 3.847 6 O -0.277 6.277 7 C 0.038 3.962 8 C 0.518 3.482 9 O -0.508 6.508 10 N -0.718 5.718 11 C 0.124 3.876 12 H 0.118 0.882 13 C -0.137 4.137 14 C -0.118 4.118 15 H 0.100 0.900 16 C 0.145 3.855 17 N -0.373 5.373 18 C 0.050 3.950 19 C -0.274 4.274 20 C 0.042 3.958 21 N -0.290 5.290 22 C -0.134 4.134 23 C -0.211 4.211 24 C -0.072 4.072 25 C -0.151 4.151 26 C -0.084 4.084 27 H 0.380 0.620 28 H 0.074 0.926 29 H -0.255 1.255 30 H -0.250 1.250 31 H 0.094 0.906 32 H 0.093 0.907 33 H 0.402 0.598 34 H 0.082 0.918 35 H 0.091 0.909 36 H 0.098 0.902 37 H 0.085 0.915 38 H 0.172 0.828 39 H 0.147 0.853 40 H 0.182 0.818 41 H 0.086 0.914 42 H 0.078 0.922 43 H 0.132 0.868 44 H 0.131 0.869 45 H 0.129 0.871 46 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.543 -4.860 -1.926 5.256 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.173 4.173 3 Si 0.584 3.416 4 C -0.103 4.103 5 C 0.107 3.893 6 O -0.189 6.189 7 C -0.041 4.041 8 C 0.302 3.698 9 O -0.381 6.381 10 N -0.371 5.371 11 C 0.020 3.980 12 H 0.136 0.864 13 C -0.176 4.176 14 C -0.138 4.138 15 H 0.119 0.881 16 C 0.024 3.976 17 N -0.156 5.156 18 C -0.096 4.096 19 C -0.304 4.304 20 C -0.144 4.144 21 N -0.111 5.111 22 C -0.173 4.173 23 C -0.229 4.229 24 C -0.090 4.090 25 C -0.169 4.169 26 C -0.101 4.101 27 H 0.227 0.773 28 H 0.092 0.908 29 H -0.179 1.179 30 H -0.175 1.175 31 H 0.112 0.888 32 H 0.111 0.889 33 H 0.237 0.763 34 H 0.101 0.899 35 H 0.110 0.890 36 H 0.117 0.883 37 H 0.104 0.896 38 H 0.190 0.810 39 H 0.165 0.835 40 H 0.199 0.801 41 H 0.105 0.895 42 H 0.097 0.903 43 H 0.149 0.851 44 H 0.149 0.851 45 H 0.147 0.853 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -0.007 -2.924 -2.887 4.110 hybrid contribution 0.025 -1.963 -0.251 1.980 sum 0.018 -4.888 -3.138 5.808 Atomic orbital electron populations 1.86497 1.17064 1.81943 1.49239 1.24521 0.85950 1.09656 0.97153 0.95216 0.80853 0.78473 0.87013 1.18686 1.04548 0.90379 0.96682 1.18750 0.93019 0.90694 0.86826 1.86213 1.77446 1.16828 1.38371 1.22492 1.02506 0.81414 0.97691 1.20035 0.79002 0.82593 0.88149 1.90784 1.47190 1.61062 1.39105 1.45788 1.64641 1.06184 1.20527 1.22556 0.96071 0.93253 0.86154 0.86378 1.23389 1.01586 0.95494 0.97152 1.22624 0.99033 0.93475 0.98670 0.88126 1.21726 0.99807 0.96821 0.79253 1.48726 1.34045 1.18799 1.13998 1.22607 1.01048 0.92485 0.93451 1.21563 1.06025 1.03117 0.99648 1.23956 0.99768 0.94401 0.96274 1.77396 1.09982 1.19599 1.04123 1.23452 0.96993 0.96291 1.00538 1.21288 1.06389 1.00466 0.94806 1.21013 0.96354 0.93913 0.97758 1.21036 1.02800 0.94718 0.98355 1.20885 0.97341 0.99253 0.92664 0.77282 0.90767 1.17942 1.17544 0.88805 0.88890 0.76348 0.89932 0.89028 0.88338 0.89631 0.81039 0.83542 0.80082 0.89512 0.90305 0.85063 0.85150 0.85265 0.85458 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.91 12.86 -35.23 -0.45 -2.36 16 2 C -0.06 -0.19 2.37 36.00 0.09 -0.10 16 3 Si 0.68 0.49 30.20 -169.99 -5.13 -4.64 16 4 C -0.10 -0.44 5.30 -104.47 -0.55 -1.00 16 5 C 0.15 0.58 6.66 -39.22 -0.26 0.32 16 6 O -0.28 -1.18 9.00 -39.34 -0.35 -1.53 16 7 C 0.04 0.00 5.22 36.01 0.19 0.19 16 8 C 0.52 0.97 7.91 -10.99 -0.09 0.88 16 9 O -0.51 -3.47 16.10 -14.36 -0.23 -3.70 16 10 N -0.72 1.17 5.35 -53.01 -0.28 0.89 16 11 C 0.12 -0.13 4.24 -67.11 -0.28 -0.42 16 12 H 0.12 0.14 7.47 -51.93 -0.39 -0.25 16 13 C -0.14 0.50 7.39 -25.92 -0.19 0.31 16 14 C -0.12 0.25 3.83 -89.80 -0.34 -0.10 16 15 H 0.10 -0.07 8.14 -51.93 -0.42 -0.49 16 16 C 0.15 -0.34 6.35 -4.04 -0.03 -0.37 16 17 N -0.37 -0.31 3.68 -61.36 -0.23 -0.54 16 18 C 0.05 0.00 11.45 -17.22 -0.20 -0.20 16 19 C -0.27 -0.22 10.80 -40.01 -0.43 -0.65 16 20 C 0.04 0.08 12.03 -17.36 -0.21 -0.13 16 21 N -0.29 -0.93 12.42 30.62 0.38 -0.55 16 22 C -0.13 0.09 7.43 -25.91 -0.19 -0.10 16 23 C -0.21 -0.27 9.04 -39.43 -0.36 -0.63 16 24 C -0.07 -0.06 10.04 -39.60 -0.40 -0.46 16 25 C -0.15 -0.27 10.04 -39.56 -0.40 -0.66 16 26 C -0.08 -0.28 8.66 -39.61 -0.34 -0.62 16 27 H 0.38 -0.51 8.74 45.56 0.40 -0.11 16 28 H 0.07 0.23 7.83 -51.93 -0.41 -0.18 16 29 H -0.25 -0.76 7.11 56.52 0.40 -0.36 16 30 H -0.25 -0.74 6.75 56.52 0.38 -0.36 16 31 H 0.09 -0.22 7.66 -51.93 -0.40 -0.62 16 32 H 0.09 -0.24 7.66 -51.93 -0.40 -0.64 16 33 H 0.40 -2.00 8.73 -40.82 -0.36 -2.36 16 34 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 35 H 0.09 -0.49 8.08 -51.93 -0.42 -0.91 16 36 H 0.10 -0.47 8.07 -51.92 -0.42 -0.88 16 37 H 0.09 -0.24 7.85 -51.93 -0.41 -0.65 16 38 H 0.17 -0.58 8.06 -52.49 -0.42 -1.00 16 39 H 0.15 -0.14 8.06 -52.49 -0.42 -0.56 16 40 H 0.18 -0.10 8.06 -52.49 -0.42 -0.53 16 41 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 42 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 43 H 0.13 -0.23 6.30 -52.49 -0.33 -0.56 16 44 H 0.13 -0.22 8.06 -52.49 -0.42 -0.65 16 45 H 0.13 -0.05 8.06 -52.49 -0.42 -0.47 16 46 H 0.13 0.34 4.90 -52.48 -0.26 0.08 16 LS Contribution 388.12 15.07 5.85 5.85 Total: 0.00 -12.48 388.12 -10.84 -23.32 By element: Atomic # 1 Polarization: -6.60 SS G_CDS: -6.39 Total: -12.99 kcal Atomic # 6 Polarization: 0.25 SS G_CDS: -4.00 Total: -3.74 kcal Atomic # 7 Polarization: -0.07 SS G_CDS: -0.13 Total: -0.20 kcal Atomic # 8 Polarization: -6.55 SS G_CDS: -1.04 Total: -7.59 kcal Atomic # 14 Polarization: 0.49 SS G_CDS: -5.13 Total: -4.64 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -12.48 -10.84 -23.32 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.889 kcal (2) G-P(sol) polarization free energy of solvation -12.478 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.412 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.844 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.321 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.568 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds