Wall clock time and date at job start Sun Mar 7 2021 02:36:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86302 * 109.46621 * 2 1 4 4 C 1.50696 * 109.46914 * 240.00318 * 2 1 3 5 5 C 1.38708 * 120.02796 * 284.99476 * 4 2 1 6 6 O 1.35900 * 120.05751 * 359.96075 * 5 4 2 7 7 C 1.42894 * 117.00370 * 180.02562 * 6 5 4 8 8 C 1.50699 * 109.47583 * 179.97438 * 7 6 5 9 9 O 1.21283 * 119.99341 * 359.97438 * 8 7 6 10 10 N 1.34776 * 120.00405 * 180.02562 * 8 7 6 11 11 C 1.46499 * 119.99941 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.85388 * 23.79874 * 11 10 8 13 13 C 1.53786 * 113.61357 * 154.99692 * 11 10 8 14 14 C 1.53780 * 87.08000 * 139.97941 * 13 11 10 15 15 H 1.08997 * 113.61536 * 89.11750 * 14 13 11 16 16 C 1.52998 * 113.61614 * 219.93758 * 14 13 11 17 17 N 1.46496 * 109.47353 * 185.00079 * 16 14 13 18 18 C 1.34949 * 126.03994 * 124.99777 * 17 16 14 19 19 C 1.35315 * 107.74959 * 179.97438 * 18 17 16 20 20 C 1.39870 * 107.91717 * 0.02562 * 19 18 17 21 21 N 1.30838 * 108.20316 * 359.73469 * 20 19 18 22 22 C 1.53784 * 113.60979 * 252.49337 * 11 10 8 23 23 C 1.38759 * 119.89010 * 179.97438 * 5 4 2 24 24 C 1.38119 * 119.94381 * 0.02562 * 23 5 4 25 25 C 1.38295 * 120.05704 * 359.97438 * 24 23 5 26 26 C 1.38171 * 120.03158 * 104.95308 * 4 2 1 27 27 H 0.96701 * 113.99868 * 299.99783 * 1 2 3 28 28 H 1.08999 * 109.47369 * 119.99832 * 2 1 3 29 29 H 1.48506 * 109.99736 * 178.68311 * 3 2 1 30 30 H 1.48502 * 110.00216 * 300.00095 * 3 2 1 31 31 H 1.09001 * 109.47181 * 300.00095 * 7 6 5 32 32 H 1.08998 * 109.47333 * 59.99666 * 7 6 5 33 33 H 0.97002 * 119.99581 * 359.97438 * 10 8 7 34 34 H 1.09000 * 113.61172 * 254.52470 * 13 11 10 35 35 H 1.09000 * 113.61382 * 25.34489 * 13 11 10 36 36 H 1.09010 * 109.46765 * 305.00036 * 16 14 13 37 37 H 1.09003 * 109.47160 * 64.99298 * 16 14 13 38 38 H 1.08001 * 126.12144 * 0.02562 * 18 17 16 39 39 H 1.07996 * 126.03769 * 179.97438 * 19 18 17 40 40 H 1.07997 * 125.89633 * 179.97438 * 20 19 18 41 41 H 1.08996 * 113.61765 * 334.56414 * 22 11 10 42 42 H 1.08996 * 113.61343 * 105.47750 * 22 11 10 43 43 H 1.08001 * 120.03003 * 179.97438 * 23 5 4 44 44 H 1.07997 * 119.97310 * 179.97438 * 24 23 5 45 45 H 1.07995 * 119.94657 * 179.74935 * 25 24 23 46 46 H 1.08005 * 119.97011 * 0.04236 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.8697 -2.0939 -1.3070 6 8 1.3572 -2.8107 -0.2724 7 6 1.3256 -4.2316 -0.4202 8 6 0.7297 -4.8524 0.8169 9 8 0.3682 -4.1473 1.7351 10 7 0.5995 -6.1911 0.9035 11 6 0.0197 -6.7944 2.1060 12 1 -0.6245 -6.1080 2.6555 13 6 -0.6172 -8.1720 1.8582 14 6 -0.0157 -8.6051 3.2056 15 1 -0.6690 -8.4142 4.0569 16 6 0.5478 -10.0274 3.1964 17 7 0.9862 -10.3878 4.5469 18 6 0.5881 -11.4695 5.2488 19 6 1.2205 -11.4408 6.4448 20 6 2.0324 -10.3024 6.4751 21 7 1.8969 -9.6732 5.3359 22 6 1.0496 -7.5170 2.9903 23 6 2.3325 -2.7450 -2.4416 24 6 2.8537 -2.0144 -3.4914 25 6 2.9140 -0.6350 -3.4128 26 6 2.4528 0.0161 -2.2838 27 1 -0.3933 0.4417 0.7651 28 1 1.7924 -0.5138 0.8900 29 1 3.5346 1.7704 0.0321 30 1 1.5613 2.4680 -1.2085 31 1 0.7185 -4.4933 -1.2869 32 1 2.3399 -4.6050 -0.5611 33 1 0.8890 -6.7549 0.1692 34 1 -1.7071 -8.1544 1.8521 35 1 -0.1976 -8.6993 1.0015 36 1 -0.2251 -10.7223 2.8677 37 1 1.3959 -10.0779 2.5134 38 1 -0.1095 -12.2234 4.9152 39 1 1.1159 -12.1681 7.2363 40 1 2.6652 -9.9975 7.2955 41 1 1.9259 -7.8660 2.4441 42 1 1.3053 -6.9707 3.8982 43 1 2.2860 -3.8223 -2.5034 44 1 3.2144 -2.5206 -4.3746 45 1 3.3256 -0.0657 -4.2330 46 1 2.5010 1.0934 -2.2248 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688084_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:36:01 Heat of formation + Delta-G solvation = 40.908836 kcal Electronic energy + Delta-G solvation = -28729.613765 eV Core-core repulsion = 24589.445220 eV Total energy + Delta-G solvation = -4140.168545 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.06193 -41.71157 -41.00740 -39.62090 -38.43981 -37.51531 -35.24472 -33.63128 -32.96839 -31.42516 -30.95811 -29.74539 -28.20463 -26.73527 -26.70767 -24.53548 -23.39581 -22.57596 -21.92770 -21.82253 -21.49474 -20.66536 -19.43755 -18.45900 -18.40530 -18.14477 -17.50782 -17.44486 -16.98141 -16.83231 -16.50770 -15.81214 -15.78082 -15.65269 -15.40666 -15.13973 -15.05569 -14.83195 -14.76082 -14.11997 -14.02268 -13.82104 -13.65683 -13.53072 -13.49692 -13.44310 -13.08922 -12.96318 -12.75641 -12.27247 -12.21652 -12.03693 -11.87056 -11.83335 -11.62574 -11.37939 -11.01209 -10.33787 -10.28798 -10.16248 -10.12579 -9.48374 -9.35002 -4.98937 0.06904 0.26445 1.01423 1.25473 1.37349 1.42994 1.59035 1.69589 1.87633 1.96133 2.51664 2.55125 3.32631 3.40237 3.43299 3.49649 3.66162 3.67237 3.73193 3.83602 3.91899 3.97542 4.02078 4.04844 4.09258 4.13986 4.20448 4.21772 4.30469 4.38263 4.38696 4.52156 4.68152 4.70176 4.77203 4.80197 4.83436 4.92305 4.96837 5.03516 5.14097 5.14546 5.17051 5.21664 5.35423 5.48165 5.60063 5.75946 6.17699 6.20719 6.42150 6.79872 6.83927 7.08581 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.080 4.080 3 Si 0.781 3.219 4 C -0.137 4.137 5 C 0.132 3.868 6 O -0.309 6.309 7 C 0.034 3.966 8 C 0.513 3.487 9 O -0.571 6.571 10 N -0.697 5.697 11 C 0.116 3.884 12 H 0.087 0.913 13 C -0.112 4.112 14 C -0.112 4.112 15 H 0.081 0.919 16 C 0.139 3.861 17 N -0.377 5.377 18 C 0.053 3.947 19 C -0.294 4.294 20 C 0.024 3.976 21 N -0.332 5.332 22 C -0.134 4.134 23 C -0.207 4.207 24 C -0.072 4.072 25 C -0.158 4.158 26 C -0.105 4.105 27 H 0.396 0.604 28 H 0.063 0.937 29 H -0.286 1.286 30 H -0.280 1.280 31 H 0.123 0.877 32 H 0.124 0.876 33 H 0.422 0.578 34 H 0.089 0.911 35 H 0.122 0.878 36 H 0.132 0.868 37 H 0.094 0.906 38 H 0.208 0.792 39 H 0.159 0.841 40 H 0.192 0.808 41 H 0.094 0.906 42 H 0.042 0.958 43 H 0.165 0.835 44 H 0.162 0.838 45 H 0.149 0.851 46 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.695 -7.205 -4.245 8.391 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.188 4.188 3 Si 0.685 3.315 4 C -0.138 4.138 5 C 0.086 3.914 6 O -0.221 6.221 7 C -0.043 4.043 8 C 0.299 3.701 9 O -0.449 6.449 10 N -0.351 5.351 11 C 0.011 3.989 12 H 0.106 0.894 13 C -0.150 4.150 14 C -0.132 4.132 15 H 0.099 0.901 16 C 0.019 3.981 17 N -0.160 5.160 18 C -0.093 4.093 19 C -0.323 4.323 20 C -0.161 4.161 21 N -0.154 5.154 22 C -0.173 4.173 23 C -0.226 4.226 24 C -0.090 4.090 25 C -0.176 4.176 26 C -0.122 4.122 27 H 0.246 0.754 28 H 0.081 0.919 29 H -0.213 1.213 30 H -0.207 1.207 31 H 0.141 0.859 32 H 0.141 0.859 33 H 0.261 0.739 34 H 0.108 0.892 35 H 0.141 0.859 36 H 0.150 0.850 37 H 0.112 0.888 38 H 0.224 0.776 39 H 0.177 0.823 40 H 0.209 0.791 41 H 0.113 0.887 42 H 0.061 0.939 43 H 0.182 0.818 44 H 0.180 0.820 45 H 0.166 0.834 46 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -0.168 -5.328 -5.217 7.458 hybrid contribution 0.078 -1.317 0.453 1.394 sum -0.090 -6.644 -4.764 8.176 Atomic orbital electron populations 1.86439 1.17646 1.82579 1.50536 1.24864 0.85699 1.11633 0.96624 0.94143 0.77456 0.75125 0.84786 1.19052 1.05730 0.91483 0.97523 1.19001 0.93889 0.90779 0.87683 1.86166 1.77848 1.18887 1.39217 1.22765 1.04587 0.79641 0.97355 1.20535 0.78205 0.83289 0.88089 1.90759 1.50146 1.62627 1.41370 1.45641 1.63264 1.05343 1.20812 1.22507 0.96015 0.94058 0.86326 0.89444 1.23307 1.01904 0.92805 0.97032 1.22491 0.98062 0.93513 0.99092 0.90051 1.22032 1.01039 0.96928 0.78097 1.49007 1.33438 1.18758 1.14769 1.23204 1.00689 0.92502 0.92943 1.21864 1.06406 1.03259 1.00776 1.24312 1.00318 0.94974 0.96475 1.77325 1.11762 1.21151 1.05154 1.23422 0.97807 0.96862 0.99203 1.21685 1.04996 1.02182 0.93696 1.21430 0.95388 0.93585 0.98590 1.21379 1.02276 0.95694 0.98222 1.21018 0.98422 0.99326 0.93459 0.75356 0.91909 1.21289 1.20703 0.85919 0.85868 0.73900 0.89203 0.85933 0.85018 0.88759 0.77564 0.82298 0.79101 0.88712 0.93901 0.81793 0.82004 0.83357 0.85763 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -5.26 12.86 -148.98 -1.92 -7.17 16 2 C -0.08 -0.67 2.37 71.23 0.17 -0.50 16 3 Si 0.78 2.35 30.20 68.60 2.07 4.42 16 4 C -0.14 -1.44 5.30 -19.77 -0.10 -1.54 16 5 C 0.13 1.11 6.66 22.51 0.15 1.26 16 6 O -0.31 -3.04 9.00 -73.39 -0.66 -3.70 16 7 C 0.03 -0.01 5.22 71.24 0.37 0.36 16 8 C 0.51 2.43 7.91 87.66 0.69 3.12 16 9 O -0.57 -9.57 16.10 16.00 0.26 -9.31 16 10 N -0.70 2.46 5.35 -440.03 -2.36 0.10 16 11 C 0.12 -0.15 4.24 45.52 0.19 0.04 16 12 H 0.09 0.47 7.47 -2.39 -0.02 0.45 16 13 C -0.11 0.99 7.39 31.12 0.23 1.22 16 14 C -0.11 0.47 3.83 -10.27 -0.04 0.43 16 15 H 0.08 0.00 8.14 -2.39 -0.02 -0.02 16 16 C 0.14 -0.87 6.35 86.38 0.55 -0.32 16 17 N -0.38 -0.51 3.68 -348.06 -1.28 -1.79 16 18 C 0.05 -0.06 11.45 83.54 0.96 0.90 16 19 C -0.29 -0.52 10.80 21.99 0.24 -0.28 16 20 C 0.02 0.13 12.03 85.24 1.02 1.15 16 21 N -0.33 -2.57 12.42 -57.03 -0.71 -3.27 16 22 C -0.13 0.00 7.43 31.12 0.23 0.23 16 23 C -0.21 -0.27 9.04 22.37 0.20 -0.07 16 24 C -0.07 -0.01 10.04 22.25 0.22 0.22 16 25 C -0.16 -0.51 10.04 22.28 0.22 -0.29 16 26 C -0.10 -0.83 8.66 22.25 0.19 -0.64 16 27 H 0.40 -0.23 8.74 -74.06 -0.65 -0.88 16 28 H 0.06 0.59 7.83 -2.39 -0.02 0.57 16 29 H -0.29 -2.22 7.11 99.48 0.71 -1.52 16 30 H -0.28 -2.11 6.75 99.48 0.67 -1.44 16 31 H 0.12 -0.82 7.66 -2.39 -0.02 -0.83 16 32 H 0.12 -0.86 7.66 -2.39 -0.02 -0.88 16 33 H 0.42 -5.10 8.73 -92.71 -0.81 -5.91 16 34 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 35 H 0.12 -1.78 8.08 -2.39 -0.02 -1.80 16 36 H 0.13 -1.69 8.07 -2.38 -0.02 -1.71 16 37 H 0.09 -0.72 7.85 -2.39 -0.02 -0.74 16 38 H 0.21 -1.94 8.06 -2.91 -0.02 -1.96 16 39 H 0.16 -0.31 8.06 -2.91 -0.02 -0.33 16 40 H 0.19 0.14 8.06 -2.91 -0.02 0.12 16 41 H 0.09 -0.17 7.90 -2.39 -0.02 -0.19 16 42 H 0.04 0.31 8.14 -2.39 -0.02 0.29 16 43 H 0.16 -1.07 6.30 -2.91 -0.02 -1.09 16 44 H 0.16 -1.07 8.06 -2.91 -0.02 -1.09 16 45 H 0.15 -0.23 8.06 -2.91 -0.02 -0.26 16 46 H 0.12 0.89 4.90 -2.91 -0.01 0.87 16 Total: 0.00 -35.11 388.12 0.48 -34.63 By element: Atomic # 1 Polarization: -18.75 SS G_CDS: -0.44 Total: -19.19 kcal Atomic # 6 Polarization: -0.22 SS G_CDS: 5.50 Total: 5.29 kcal Atomic # 7 Polarization: -0.62 SS G_CDS: -4.34 Total: -4.96 kcal Atomic # 8 Polarization: -17.87 SS G_CDS: -2.32 Total: -20.19 kcal Atomic # 14 Polarization: 2.35 SS G_CDS: 2.07 Total: 4.42 kcal Total: -35.11 0.48 -34.63 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.539 kcal (2) G-P(sol) polarization free energy of solvation -35.107 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.432 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.477 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.630 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.909 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds