Wall clock time and date at job start Sun Mar 7 2021 02:36:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86289 * 109.47570 * 2 1 4 4 C 1.50705 * 109.46728 * 120.00313 * 2 1 3 5 5 C 1.38270 * 119.93813 * 245.27253 * 4 2 1 6 6 C 1.38147 * 120.05177 * 180.24023 * 5 4 2 7 7 C 1.38736 * 119.94540 * 359.46077 * 6 5 4 8 8 O 1.35892 * 120.05957 * 180.26040 * 7 6 5 9 9 C 1.42899 * 117.00396 * 180.02562 * 8 7 6 10 10 C 1.53001 * 109.47431 * 179.97438 * 9 8 7 11 11 C 1.50695 * 109.47158 * 179.97438 * 10 9 8 12 12 O 1.21287 * 120.00349 * 0.02562 * 11 10 9 13 13 N 1.34779 * 119.99989 * 179.97438 * 11 10 9 14 14 C 1.46502 * 120.00142 * 179.97438 * 13 11 10 15 15 H 1.09002 * 112.84645 * 23.80955 * 14 13 11 16 16 C 1.53773 * 113.61412 * 154.99921 * 14 13 11 17 17 C 1.53780 * 87.07990 * 139.98454 * 16 14 13 18 18 H 1.09000 * 113.61521 * 89.11631 * 17 16 14 19 19 C 1.53006 * 113.61763 * 220.02053 * 17 16 14 20 20 N 1.46503 * 109.47225 * 184.99770 * 19 17 16 21 21 C 1.34945 * 126.03403 * 124.99953 * 20 19 17 22 22 C 1.35313 * 107.74741 * 179.97438 * 21 20 19 23 23 C 1.39873 * 107.91862 * 0.02562 * 22 21 20 24 24 N 1.30838 * 108.20284 * 359.73703 * 23 22 21 25 25 C 1.53782 * 87.08322 * 334.56718 * 17 16 14 26 26 C 1.38740 * 119.88595 * 0.28283 * 7 6 5 27 27 C 1.38146 * 119.94197 * 359.97438 * 26 7 6 28 28 H 0.96703 * 113.99810 * 299.99988 * 1 2 3 29 29 H 1.08997 * 109.46673 * 239.99524 * 2 1 3 30 30 H 1.48498 * 110.00176 * 300.00193 * 3 2 1 31 31 H 1.48507 * 110.00293 * 61.31845 * 3 2 1 32 32 H 1.07995 * 119.98059 * 359.97438 * 5 4 2 33 33 H 1.08002 * 120.03108 * 179.74549 * 6 5 4 34 34 H 1.08997 * 109.47463 * 300.00468 * 9 8 7 35 35 H 1.09002 * 109.46662 * 59.99805 * 9 8 7 36 36 H 1.09000 * 109.46982 * 300.00091 * 10 9 8 37 37 H 1.09002 * 109.46720 * 60.00058 * 10 9 8 38 38 H 0.97002 * 119.99890 * 0.02562 * 13 11 10 39 39 H 1.08998 * 113.62048 * 254.53079 * 16 14 13 40 40 H 1.09003 * 113.61534 * 25.44220 * 16 14 13 41 41 H 1.08999 * 109.46868 * 305.00350 * 19 17 16 42 42 H 1.09002 * 109.46872 * 64.99726 * 19 17 16 43 43 H 1.08004 * 126.12860 * 0.02562 * 21 20 19 44 44 H 1.08003 * 126.04525 * 179.97438 * 22 21 20 45 45 H 1.07998 * 125.90145 * 179.97438 * 23 22 21 46 46 H 1.08997 * 113.61481 * 270.88848 * 25 17 16 47 47 H 1.09001 * 113.61221 * 139.97459 * 25 17 16 48 48 H 1.07993 * 120.02463 * 180.02562 * 26 7 6 49 49 H 1.08006 * 119.96944 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9312 -0.7105 1.2305 5 6 2.6338 -0.0098 2.1935 6 6 3.0995 -0.6598 3.3200 7 6 2.8522 -2.0144 3.4899 8 8 3.3047 -2.6549 4.5997 9 6 3.0137 -4.0498 4.7078 10 6 3.5992 -4.5934 6.0126 11 6 3.2917 -6.0642 6.1268 12 8 2.6662 -6.6229 5.2506 13 7 3.7126 -6.7592 7.2022 14 6 3.4132 -8.1889 7.3135 15 1 3.2331 -8.6601 6.3472 16 6 4.4069 -8.9593 8.1987 17 6 3.1971 -9.7355 8.7453 18 1 2.9568 -10.6303 8.1710 19 6 3.2649 -9.9950 10.2516 20 7 2.1358 -10.8376 10.6534 21 6 2.2168 -12.0104 11.3159 22 6 0.9570 -12.4704 11.4956 23 6 0.0760 -11.5473 10.9228 24 7 0.7812 -10.5655 10.4223 25 6 2.3425 -8.5138 8.3685 26 6 2.1425 -2.7139 2.5247 27 6 1.6835 -2.0604 1.3975 28 1 -0.3933 0.4417 0.7651 29 1 1.7922 -0.5139 -0.8899 30 1 1.5616 2.4678 -1.2084 31 1 1.5880 2.4585 1.2243 32 1 2.8223 1.0455 2.0629 33 1 3.6518 -0.1131 4.0700 34 1 1.9337 -4.1969 4.7046 35 1 3.4549 -4.5794 3.8634 36 1 4.6792 -4.4464 6.0152 37 1 3.1583 -4.0637 6.8571 38 1 4.2132 -6.3125 7.9028 39 1 5.1046 -9.5786 7.6351 40 1 4.8998 -8.3369 8.9456 41 1 4.1998 -10.5016 10.4913 42 1 3.2185 -9.0462 10.7862 43 1 3.1244 -12.4948 11.6446 44 1 0.6806 -13.3886 11.9927 45 1 -1.0007 -11.6288 10.9011 46 1 2.2712 -7.7696 9.1617 47 1 1.3737 -8.7735 7.9418 48 1 1.9483 -3.7683 2.6549 49 1 1.1312 -2.6047 0.6456 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:36:11 Heat of formation + Delta-G solvation = 29.454532 kcal Electronic energy + Delta-G solvation = -29646.442177 eV Core-core repulsion = 25350.239317 eV Total energy + Delta-G solvation = -4296.202860 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.08140 -41.43845 -41.06392 -39.70177 -39.05462 -37.23070 -35.21706 -33.79264 -33.09783 -32.04281 -31.37590 -30.93945 -28.64853 -26.88147 -26.63676 -25.73453 -24.18748 -23.28398 -22.15465 -21.94077 -21.65128 -21.49238 -20.71543 -19.48567 -18.36518 -18.32371 -17.82939 -17.49596 -17.37336 -16.94420 -16.57331 -16.32589 -16.14490 -15.99842 -15.75052 -15.48308 -15.24134 -14.98458 -14.83444 -14.62019 -14.56854 -14.24119 -14.10966 -13.90331 -13.70398 -13.58328 -13.51379 -13.38500 -13.10776 -12.93737 -12.82457 -12.33128 -12.15857 -12.03219 -11.98561 -11.78671 -11.62479 -11.50350 -11.44068 -10.97964 -10.53125 -10.31591 -10.14619 -9.99149 -9.49021 -9.15549 -4.93173 0.31693 0.39621 1.00250 1.32876 1.47818 1.55915 1.61621 1.68851 1.99334 1.99521 2.44345 2.71010 3.16194 3.28693 3.43787 3.46694 3.51397 3.62090 3.75409 3.79392 3.82117 3.88218 3.89190 3.92749 3.99802 4.04811 4.14695 4.24040 4.25637 4.31918 4.37571 4.48713 4.55529 4.56993 4.58006 4.63290 4.65262 4.71604 4.72998 4.81763 4.89880 5.01934 5.03062 5.09503 5.14416 5.23514 5.37524 5.41307 5.54272 5.73540 5.76919 6.09060 6.30891 6.38894 6.45477 6.82204 7.06594 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.070 4.070 3 Si 0.685 3.315 4 C -0.157 4.157 5 C -0.079 4.079 6 C -0.147 4.147 7 C 0.138 3.862 8 O -0.316 6.316 9 C 0.074 3.926 10 C -0.142 4.142 11 C 0.521 3.479 12 O -0.537 6.537 13 N -0.718 5.718 14 C 0.121 3.879 15 H 0.117 0.883 16 C -0.138 4.138 17 C -0.119 4.119 18 H 0.100 0.900 19 C 0.145 3.855 20 N -0.373 5.373 21 C 0.050 3.950 22 C -0.274 4.274 23 C 0.042 3.958 24 N -0.290 5.290 25 C -0.134 4.134 26 C -0.206 4.206 27 C -0.051 4.051 28 H 0.375 0.625 29 H 0.116 0.884 30 H -0.258 1.258 31 H -0.260 1.260 32 H 0.133 0.867 33 H 0.135 0.865 34 H 0.073 0.927 35 H 0.073 0.927 36 H 0.108 0.892 37 H 0.107 0.893 38 H 0.403 0.597 39 H 0.081 0.919 40 H 0.091 0.909 41 H 0.098 0.902 42 H 0.086 0.914 43 H 0.173 0.827 44 H 0.147 0.853 45 H 0.182 0.818 46 H 0.086 0.914 47 H 0.077 0.923 48 H 0.132 0.868 49 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.433 -1.108 4.739 8.066 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.180 4.180 3 Si 0.586 3.414 4 C -0.157 4.157 5 C -0.097 4.097 6 C -0.165 4.165 7 C 0.092 3.908 8 O -0.230 6.230 9 C -0.002 4.002 10 C -0.182 4.182 11 C 0.308 3.692 12 O -0.414 6.414 13 N -0.369 5.369 14 C 0.016 3.984 15 H 0.135 0.865 16 C -0.176 4.176 17 C -0.138 4.138 18 H 0.118 0.882 19 C 0.024 3.976 20 N -0.155 5.155 21 C -0.096 4.096 22 C -0.303 4.303 23 C -0.144 4.144 24 N -0.111 5.111 25 C -0.173 4.173 26 C -0.225 4.225 27 C -0.069 4.069 28 H 0.223 0.777 29 H 0.134 0.866 30 H -0.183 1.183 31 H -0.185 1.185 32 H 0.150 0.850 33 H 0.153 0.847 34 H 0.091 0.909 35 H 0.091 0.909 36 H 0.126 0.874 37 H 0.125 0.875 38 H 0.238 0.762 39 H 0.100 0.900 40 H 0.110 0.890 41 H 0.117 0.883 42 H 0.104 0.896 43 H 0.190 0.810 44 H 0.165 0.835 45 H 0.199 0.801 46 H 0.105 0.895 47 H 0.096 0.904 48 H 0.150 0.850 49 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 6.063 0.292 3.048 6.792 hybrid contribution -0.884 -1.140 1.422 2.026 sum 5.179 -0.847 4.470 6.894 Atomic orbital electron populations 1.86600 1.17887 1.79955 1.49301 1.24957 0.83819 1.10843 0.98397 0.95021 0.91653 0.74594 0.80085 1.20169 1.02810 0.95010 0.97724 1.20859 0.96539 0.99416 0.92872 1.20372 1.04772 0.91692 0.99698 1.18995 0.93730 0.92076 0.85975 1.85963 1.74049 1.23627 1.39359 1.22423 1.01142 0.78908 0.97682 1.21477 1.04518 0.92612 0.99562 1.20336 0.78671 0.88638 0.81603 1.90760 1.39619 1.71295 1.39681 1.45929 1.57794 1.10052 1.23166 1.22549 0.96084 0.80183 0.99566 0.86494 1.23382 0.96531 0.98598 0.99126 1.22632 0.97727 0.98943 0.94546 0.88180 1.21731 0.85595 0.95100 0.95193 1.48725 1.05581 1.17135 1.44102 1.22608 1.00295 0.88695 0.97996 1.21562 0.91753 1.04451 1.12574 1.23956 1.00522 0.92363 0.97555 1.77394 0.86402 1.23578 1.23769 1.23443 0.98803 0.96505 0.98512 1.21393 1.03936 1.01035 0.96143 1.20829 0.96171 0.93521 0.96360 0.77702 0.86571 1.18300 1.18543 0.84966 0.84700 0.90915 0.90854 0.87401 0.87458 0.76196 0.90001 0.89026 0.88340 0.89611 0.81028 0.83545 0.80091 0.89515 0.90397 0.84969 0.85351 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.06 12.83 -35.23 -0.45 -1.51 16 2 C -0.07 -0.03 2.80 36.01 0.10 0.07 16 3 Si 0.68 -0.36 29.89 -169.99 -5.08 -5.44 16 4 C -0.16 -0.15 5.35 -104.60 -0.56 -0.71 16 5 C -0.08 -0.03 8.66 -39.60 -0.34 -0.37 16 6 C -0.15 -0.15 9.99 -39.43 -0.39 -0.55 16 7 C 0.14 0.27 6.69 -39.21 -0.26 0.01 16 8 O -0.32 -0.50 10.14 -19.40 -0.20 -0.70 16 9 C 0.07 0.02 4.03 37.16 0.15 0.17 16 10 C -0.14 0.27 6.07 -27.88 -0.17 0.10 16 11 C 0.52 0.12 7.83 -10.99 -0.09 0.04 16 12 O -0.54 -2.42 15.58 5.55 0.09 -2.33 16 13 N -0.72 1.58 5.35 -53.02 -0.28 1.30 16 14 C 0.12 -0.17 4.24 -67.12 -0.28 -0.46 16 15 H 0.12 0.08 7.46 -51.93 -0.39 -0.31 16 16 C -0.14 0.53 7.39 -25.92 -0.19 0.33 16 17 C -0.12 0.26 3.83 -89.80 -0.34 -0.08 16 18 H 0.10 -0.08 8.14 -51.93 -0.42 -0.50 16 19 C 0.15 -0.35 6.35 -4.04 -0.03 -0.38 16 20 N -0.37 -0.29 3.68 -61.36 -0.23 -0.51 16 21 C 0.05 -0.01 11.45 -17.23 -0.20 -0.20 16 22 C -0.27 -0.21 10.80 -40.01 -0.43 -0.64 16 23 C 0.04 0.08 12.03 -17.36 -0.21 -0.13 16 24 N -0.29 -0.92 12.42 30.62 0.38 -0.53 16 25 C -0.13 0.11 7.43 -25.92 -0.19 -0.08 16 26 C -0.21 -0.37 9.04 -39.43 -0.36 -0.73 16 27 C -0.05 -0.08 9.68 -39.61 -0.38 -0.47 16 28 H 0.38 -0.29 8.70 45.56 0.40 0.10 16 29 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 30 H -0.26 -0.72 7.11 56.52 0.40 -0.32 16 31 H -0.26 -0.33 7.00 56.52 0.40 0.07 16 32 H 0.13 -0.19 4.83 -52.49 -0.25 -0.45 16 33 H 0.14 -0.06 8.06 -52.49 -0.42 -0.49 16 34 H 0.07 0.07 7.62 -51.93 -0.40 -0.32 16 35 H 0.07 0.05 7.62 -51.93 -0.40 -0.34 16 36 H 0.11 -0.38 8.14 -51.93 -0.42 -0.81 16 37 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 38 H 0.40 -2.05 8.73 -40.82 -0.36 -2.41 16 39 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 40 H 0.09 -0.50 8.08 -51.93 -0.42 -0.92 16 41 H 0.10 -0.47 8.07 -51.93 -0.42 -0.89 16 42 H 0.09 -0.24 7.84 -51.93 -0.41 -0.65 16 43 H 0.17 -0.59 8.06 -52.48 -0.42 -1.01 16 44 H 0.15 -0.14 8.06 -52.48 -0.42 -0.57 16 45 H 0.18 -0.11 8.06 -52.49 -0.42 -0.53 16 46 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 47 H 0.08 0.13 8.14 -51.93 -0.42 -0.30 16 48 H 0.13 0.14 6.30 -52.49 -0.33 -0.19 16 49 H 0.13 0.13 8.06 -52.48 -0.42 -0.30 16 LS Contribution 409.75 15.07 6.17 6.17 Total: 0.00 -10.19 409.75 -11.00 -21.19 By element: Atomic # 1 Polarization: -6.35 SS G_CDS: -7.22 Total: -13.58 kcal Atomic # 6 Polarization: 0.11 SS G_CDS: -4.18 Total: -4.07 kcal Atomic # 7 Polarization: 0.38 SS G_CDS: -0.13 Total: 0.25 kcal Atomic # 8 Polarization: -3.98 SS G_CDS: -0.56 Total: -4.54 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.08 Total: -5.44 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -10.19 -11.00 -21.19 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.646 kcal (2) G-P(sol) polarization free energy of solvation -10.191 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.455 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.000 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.192 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.455 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds