Wall clock time and date at job start Sun Mar 7 2021 02:36:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86301 * 109.47334 * 2 1 4 4 C 1.50703 * 109.46787 * 239.99913 * 2 1 3 5 5 C 1.38248 * 119.96728 * 120.00522 * 4 2 1 6 6 C 1.38288 * 120.11039 * 179.97438 * 5 4 2 7 7 C 1.38126 * 120.05556 * 0.03274 * 6 5 4 8 8 C 1.38756 * 119.94242 * 359.97438 * 7 6 5 9 9 O 1.35903 * 120.05254 * 179.97438 * 8 7 6 10 10 C 1.42894 * 117.00302 * 359.97438 * 9 8 7 11 11 C 1.53002 * 109.47182 * 180.02562 * 10 9 8 12 12 C 1.50706 * 109.46980 * 180.02562 * 11 10 9 13 13 O 1.21283 * 120.00003 * 359.97438 * 12 11 10 14 14 N 1.34769 * 119.99945 * 179.97438 * 12 11 10 15 15 C 1.46497 * 120.00274 * 179.97438 * 14 12 11 16 16 H 1.09002 * 112.90477 * 336.24972 * 15 14 12 17 17 C 1.53779 * 113.61581 * 107.50145 * 15 14 12 18 18 C 1.53779 * 87.08402 * 139.98450 * 17 15 14 19 19 H 1.09000 * 113.61527 * 89.11480 * 18 17 15 20 20 C 1.53000 * 113.61731 * 220.02348 * 18 17 15 21 21 N 1.46508 * 109.46810 * 272.49594 * 20 18 17 22 22 C 1.34952 * 126.03711 * 124.99880 * 21 20 18 23 23 C 1.35319 * 107.74187 * 179.97438 * 22 21 20 24 24 C 1.39867 * 107.92287 * 0.02562 * 23 22 21 25 25 N 1.30839 * 108.20086 * 359.74022 * 24 23 22 26 26 C 1.53784 * 113.61569 * 204.99925 * 15 14 12 27 27 C 1.38163 * 119.97615 * 300.29699 * 4 2 1 28 28 H 0.96703 * 114.00171 * 60.00086 * 1 2 3 29 29 H 1.09002 * 109.47431 * 120.00295 * 2 1 3 30 30 H 1.48497 * 109.99682 * 298.68461 * 3 2 1 31 31 H 1.48499 * 109.99684 * 59.99665 * 3 2 1 32 32 H 1.07999 * 119.94637 * 359.97438 * 5 4 2 33 33 H 1.07993 * 119.97634 * 180.02562 * 6 5 4 34 34 H 1.08001 * 120.03229 * 179.97438 * 7 6 5 35 35 H 1.09005 * 109.47171 * 59.99796 * 10 9 8 36 36 H 1.09000 * 109.46829 * 300.00126 * 10 9 8 37 37 H 1.08991 * 109.47306 * 59.99647 * 11 10 9 38 38 H 1.09001 * 109.46599 * 299.99640 * 11 10 9 39 39 H 0.97009 * 120.00192 * 359.97438 * 14 12 11 40 40 H 1.09006 * 113.61307 * 25.43652 * 17 15 14 41 41 H 1.08999 * 113.69146 * 254.54138 * 17 15 14 42 42 H 1.09003 * 109.47303 * 32.48927 * 20 18 17 43 43 H 1.08993 * 109.47406 * 152.49206 * 20 18 17 44 44 H 1.07992 * 126.12736 * 359.97438 * 22 21 20 45 45 H 1.07999 * 126.03601 * 179.97438 * 23 22 21 46 46 H 1.07994 * 125.89955 * 179.97438 * 24 23 22 47 47 H 1.09004 * 113.61451 * 105.47149 * 26 15 14 48 48 H 1.08994 * 113.61477 * 334.56451 * 26 15 14 49 49 H 1.08007 * 120.02822 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 2.7261 -0.0380 -2.1401 6 6 3.1891 -0.6872 -3.2699 7 6 2.8576 -2.0095 -3.4927 8 6 2.0599 -2.6865 -2.5813 9 8 1.7320 -3.9874 -2.7985 10 6 2.2429 -4.5957 -3.9863 11 6 1.7713 -6.0494 -4.0583 12 6 2.3107 -6.6910 -5.3107 13 8 3.0036 -6.0487 -6.0711 14 7 2.0230 -7.9786 -5.5858 15 6 2.5468 -8.6023 -6.8035 16 1 2.7845 -7.8779 -7.5826 17 6 3.6726 -9.6164 -6.5410 18 6 3.0288 -10.4938 -7.6275 19 1 3.3982 -10.2866 -8.6318 20 6 3.0276 -11.9859 -7.2894 21 7 4.2825 -12.5905 -7.7437 22 6 5.1457 -13.2950 -6.9822 23 6 6.1745 -13.6789 -7.7730 24 6 5.9320 -13.1919 -9.0615 25 7 4.7955 -12.5438 -9.0463 26 6 1.7023 -9.7873 -7.3010 27 6 1.5921 -2.0314 -1.4517 28 1 -0.3934 0.4417 -0.7651 29 1 1.7924 -0.5139 0.8900 30 1 1.5879 2.4585 -1.2242 31 1 1.5615 2.4678 1.2085 32 1 2.9859 0.9960 -1.9680 33 1 3.8101 -0.1600 -3.9788 34 1 3.2190 -2.5160 -4.3754 35 1 3.3325 -4.5671 -3.9694 36 1 1.8787 -4.0523 -4.8582 37 1 0.6819 -6.0775 -4.0754 38 1 2.1352 -6.5929 -3.1864 39 1 1.4690 -8.4925 -4.9775 40 1 3.6383 -10.0588 -5.5454 41 1 4.6638 -9.2491 -6.8071 42 1 2.9321 -12.1141 -6.2111 43 1 2.1889 -12.4710 -7.7886 44 1 5.0351 -13.5133 -5.9304 45 1 7.0318 -14.2583 -7.4635 46 1 6.5705 -13.3305 -9.9214 47 1 1.1023 -9.5567 -8.1814 48 1 1.1295 -10.2764 -6.5133 49 1 0.9669 -2.5548 -0.7434 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:36:15 Heat of formation + Delta-G solvation = 29.126651 kcal Electronic energy + Delta-G solvation = -29682.009671 eV Core-core repulsion = 25385.792594 eV Total energy + Delta-G solvation = -4296.217078 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.09493 -41.46392 -41.09331 -39.73424 -39.03813 -37.33390 -35.24470 -33.80132 -33.07759 -32.44067 -31.00496 -30.78985 -28.63281 -27.04615 -26.94959 -25.76270 -23.87357 -23.62882 -22.11695 -22.06999 -21.57653 -21.56471 -20.54080 -19.34357 -18.38694 -18.19937 -17.76679 -17.51389 -17.32972 -17.12023 -16.84981 -16.41655 -16.31859 -16.15265 -15.85149 -15.54008 -15.25290 -14.92507 -14.73457 -14.61271 -14.43748 -14.35703 -14.05632 -13.95235 -13.78157 -13.69371 -13.45310 -13.23078 -13.09262 -12.88781 -12.85538 -12.43906 -12.36663 -12.01795 -11.92750 -11.83150 -11.64402 -11.54625 -11.51193 -11.02191 -10.64609 -10.31319 -10.20077 -9.89151 -9.47942 -9.22112 -4.93916 0.24126 0.43835 0.99926 1.27978 1.44028 1.55254 1.62093 1.66589 1.97502 1.99191 2.42404 2.70194 3.20126 3.29635 3.36695 3.38253 3.45470 3.56935 3.64329 3.78192 3.78631 3.82033 3.89685 3.92713 4.00667 4.07309 4.20042 4.23302 4.27307 4.32102 4.34125 4.40334 4.52981 4.54378 4.55106 4.56748 4.60019 4.70896 4.71628 4.80145 4.83989 4.89723 5.00367 5.08563 5.14239 5.29427 5.36734 5.40814 5.47058 5.70884 5.76539 6.08835 6.27182 6.39025 6.40768 6.81213 7.02656 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.688 3.312 4 C -0.081 4.081 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.316 6.316 10 C 0.074 3.926 11 C -0.142 4.142 12 C 0.521 3.479 13 O -0.537 6.537 14 N -0.719 5.719 15 C 0.124 3.876 16 H 0.118 0.882 17 C -0.146 4.146 18 C -0.120 4.120 19 H 0.110 0.890 20 C 0.146 3.854 21 N -0.371 5.371 22 C 0.051 3.949 23 C -0.274 4.274 24 C 0.045 3.955 25 N -0.295 5.295 26 C -0.137 4.137 27 C -0.126 4.126 28 H 0.376 0.624 29 H 0.120 0.880 30 H -0.260 1.260 31 H -0.257 1.257 32 H 0.129 0.871 33 H 0.131 0.869 34 H 0.132 0.868 35 H 0.073 0.927 36 H 0.072 0.928 37 H 0.108 0.892 38 H 0.107 0.893 39 H 0.404 0.596 40 H 0.086 0.914 41 H 0.074 0.926 42 H 0.096 0.904 43 H 0.087 0.913 44 H 0.172 0.828 45 H 0.147 0.853 46 H 0.183 0.817 47 H 0.083 0.917 48 H 0.091 0.909 49 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.193 -3.118 1.951 3.683 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.185 4.185 3 Si 0.590 3.410 4 C -0.081 4.081 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.182 4.182 12 C 0.308 3.692 13 O -0.413 6.413 14 N -0.370 5.370 15 C 0.020 3.980 16 H 0.136 0.864 17 C -0.185 4.185 18 C -0.140 4.140 19 H 0.128 0.872 20 C 0.024 3.976 21 N -0.154 5.154 22 C -0.095 4.095 23 C -0.304 4.304 24 C -0.141 4.141 25 N -0.117 5.117 26 C -0.176 4.176 27 C -0.144 4.144 28 H 0.224 0.776 29 H 0.138 0.862 30 H -0.185 1.185 31 H -0.182 1.182 32 H 0.146 0.854 33 H 0.149 0.851 34 H 0.150 0.850 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.126 0.874 38 H 0.126 0.874 39 H 0.238 0.762 40 H 0.104 0.896 41 H 0.093 0.907 42 H 0.115 0.885 43 H 0.106 0.894 44 H 0.189 0.811 45 H 0.165 0.835 46 H 0.200 0.800 47 H 0.102 0.898 48 H 0.109 0.891 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -0.535 -1.523 1.436 2.161 hybrid contribution -0.535 -1.099 0.049 1.224 sum -1.070 -2.623 1.485 3.198 Atomic orbital electron populations 1.86603 1.17575 1.80006 1.49317 1.25078 0.84063 1.11094 0.98307 0.94887 0.91757 0.74196 0.80204 1.20073 0.97661 0.93858 0.96533 1.20930 1.00823 1.00006 0.95455 1.20931 0.97815 0.93689 0.96676 1.21403 1.03109 0.96499 1.01061 1.18956 0.94663 0.83178 0.94519 1.85972 1.71203 1.22808 1.43048 1.22414 0.99378 0.92071 0.86261 1.21479 1.03915 0.95474 0.97322 1.20346 0.80043 0.81858 0.86977 1.90758 1.37877 1.62684 1.49998 1.45936 1.53816 1.12152 1.25088 1.22485 0.94489 0.93318 0.87744 0.86367 1.23562 0.99416 0.96662 0.98870 1.22708 0.97587 0.92432 1.01267 0.87168 1.21727 0.83018 0.92836 0.99969 1.48702 1.18354 1.41574 1.06725 1.22582 0.91660 0.96869 0.98350 1.21560 1.02938 1.12068 0.93815 1.23933 0.94742 0.96919 0.98555 1.77340 1.12654 1.23813 0.97896 1.23376 0.96370 0.95608 1.02236 1.20235 1.03075 0.93994 0.97134 0.77594 0.86201 1.18485 1.18214 0.85386 0.85143 0.84983 0.90877 0.90949 0.87420 0.87431 0.76163 0.89551 0.90722 0.88544 0.89433 0.81100 0.83529 0.80030 0.89848 0.89061 0.84825 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.86 12.76 -35.23 -0.45 -1.31 16 2 C -0.08 -0.02 2.82 36.01 0.10 0.09 16 3 Si 0.69 -0.48 29.79 -169.99 -5.06 -5.54 16 4 C -0.08 -0.07 5.39 -104.64 -0.56 -0.64 16 5 C -0.15 -0.04 8.67 -39.56 -0.34 -0.38 16 6 C -0.07 -0.03 10.04 -39.60 -0.40 -0.43 16 7 C -0.20 -0.27 9.04 -39.43 -0.36 -0.62 16 8 C 0.13 0.29 6.69 -39.22 -0.26 0.03 16 9 O -0.32 -0.58 10.14 -19.44 -0.20 -0.77 16 10 C 0.07 0.02 4.03 37.16 0.15 0.17 16 11 C -0.14 0.29 6.07 -27.88 -0.17 0.12 16 12 C 0.52 -0.04 7.83 -10.99 -0.09 -0.13 16 13 O -0.54 -2.22 15.58 5.55 0.09 -2.14 16 14 N -0.72 1.85 5.35 -53.02 -0.28 1.57 16 15 C 0.12 -0.22 4.24 -67.12 -0.28 -0.50 16 16 H 0.12 0.06 7.47 -51.93 -0.39 -0.33 16 17 C -0.15 0.27 7.43 -25.92 -0.19 0.07 16 18 C -0.12 0.25 3.87 -89.81 -0.35 -0.09 16 19 H 0.11 0.02 7.97 -51.93 -0.41 -0.40 16 20 C 0.15 -0.34 6.35 -4.04 -0.03 -0.36 16 21 N -0.37 -0.32 3.68 -61.36 -0.23 -0.54 16 22 C 0.05 0.00 11.45 -17.22 -0.20 -0.20 16 23 C -0.27 -0.22 10.80 -40.01 -0.43 -0.65 16 24 C 0.04 0.08 12.03 -17.36 -0.21 -0.13 16 25 N -0.30 -0.98 12.28 30.62 0.38 -0.60 16 26 C -0.14 0.50 7.39 -25.91 -0.19 0.31 16 27 C -0.13 -0.25 9.55 -39.44 -0.38 -0.63 16 28 H 0.38 -0.43 8.70 45.56 0.40 -0.03 16 29 H 0.12 -0.07 7.96 -51.93 -0.41 -0.48 16 30 H -0.26 -0.34 7.11 56.52 0.40 0.07 16 31 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 32 H 0.13 -0.20 4.87 -52.49 -0.26 -0.46 16 33 H 0.13 -0.21 8.06 -52.49 -0.42 -0.64 16 34 H 0.13 0.05 6.30 -52.49 -0.33 -0.28 16 35 H 0.07 0.04 7.62 -51.93 -0.40 -0.35 16 36 H 0.07 0.05 7.62 -51.93 -0.40 -0.35 16 37 H 0.11 -0.37 8.14 -51.93 -0.42 -0.80 16 38 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 39 H 0.40 -2.21 8.73 -40.82 -0.36 -2.57 16 40 H 0.09 -0.25 7.90 -51.93 -0.41 -0.66 16 41 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 42 H 0.10 -0.46 7.77 -51.93 -0.40 -0.86 16 43 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 44 H 0.17 -0.57 8.06 -52.49 -0.42 -1.00 16 45 H 0.15 -0.14 8.06 -52.49 -0.42 -0.57 16 46 H 0.18 -0.13 8.06 -52.49 -0.42 -0.55 16 47 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 48 H 0.09 -0.50 8.08 -51.93 -0.42 -0.92 16 49 H 0.13 0.26 8.06 -52.48 -0.42 -0.17 16 LS Contribution 409.45 15.07 6.17 6.17 Total: 0.00 -10.29 409.45 -10.98 -21.27 By element: Atomic # 1 Polarization: -6.92 SS G_CDS: -7.21 Total: -14.13 kcal Atomic # 6 Polarization: 0.21 SS G_CDS: -4.18 Total: -3.97 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: -0.13 Total: 0.43 kcal Atomic # 8 Polarization: -3.66 SS G_CDS: -0.56 Total: -4.22 kcal Atomic # 14 Polarization: -0.48 SS G_CDS: -5.06 Total: -5.54 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -10.29 -10.98 -21.27 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.394 kcal (2) G-P(sol) polarization free energy of solvation -10.286 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.108 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.981 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.267 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.127 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds