Wall clock time and date at job start Sun Mar 7 2021 02:36:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86303 * 109.47358 * 2 1 4 4 C 1.50703 * 109.46819 * 239.99623 * 2 1 3 5 5 C 1.38237 * 119.94609 * 299.99999 * 4 2 1 6 6 C 1.38173 * 120.05509 * 179.97438 * 5 4 2 7 7 N 1.47996 * 120.02670 * 179.97438 * 6 5 4 8 8 O 1.21799 * 120.00437 * 0.02657 * 7 6 5 9 9 O 1.21804 * 120.00118 * 180.02562 * 7 6 5 10 10 C 1.38707 * 119.94109 * 0.03047 * 6 5 4 11 11 O 1.35906 * 120.05424 * 179.97438 * 10 6 5 12 12 C 1.42893 * 117.00267 * 179.97438 * 11 10 6 13 13 C 1.50695 * 109.47603 * 180.02562 * 12 11 10 14 14 O 1.21283 * 119.99781 * 359.97438 * 13 12 11 15 15 N 1.34773 * 120.00323 * 180.02562 * 13 12 11 16 16 C 1.46501 * 119.99998 * 179.97438 * 15 13 12 17 17 H 1.09005 * 112.85067 * 23.80535 * 16 15 13 18 18 C 1.53781 * 113.61611 * 154.99655 * 16 15 13 19 19 C 1.53781 * 87.08107 * 139.98383 * 18 16 15 20 20 H 1.08995 * 113.61369 * 89.20374 * 19 18 16 21 21 C 1.53006 * 113.61256 * 220.02188 * 19 18 16 22 22 N 1.46500 * 109.46998 * 185.00048 * 21 19 18 23 23 C 1.34940 * 126.04003 * 124.71583 * 22 21 19 24 24 C 1.35320 * 107.74879 * 179.84078 * 23 22 21 25 25 C 1.39863 * 107.91673 * 0.42445 * 24 23 22 26 26 N 1.30838 * 108.20413 * 359.73663 * 25 24 23 27 27 C 1.53783 * 87.08349 * 334.56836 * 19 18 16 28 28 C 1.38749 * 119.89451 * 0.24664 * 10 6 5 29 29 C 1.38130 * 119.94007 * 359.47301 * 28 10 6 30 30 H 0.96703 * 113.99699 * 59.99898 * 1 2 3 31 31 H 1.09000 * 109.46481 * 120.00331 * 2 1 3 32 32 H 1.48496 * 109.99821 * 60.00018 * 3 2 1 33 33 H 1.48494 * 109.99813 * 181.32031 * 3 2 1 34 34 H 1.08002 * 119.97281 * 0.03151 * 5 4 2 35 35 H 1.09002 * 109.47012 * 59.99750 * 12 11 10 36 36 H 1.08998 * 109.47176 * 300.00464 * 12 11 10 37 37 H 0.97001 * 119.99879 * 359.97438 * 15 13 12 38 38 H 1.09007 * 113.61246 * 25.43436 * 18 16 15 39 39 H 1.09000 * 113.61825 * 254.53710 * 18 16 15 40 40 H 1.08993 * 109.46955 * 305.00273 * 21 19 18 41 41 H 1.09000 * 109.47050 * 65.00102 * 21 19 18 42 42 H 1.08005 * 126.12627 * 359.97438 * 23 22 21 43 43 H 1.08002 * 126.03873 * 180.16348 * 24 23 22 44 44 H 1.08004 * 125.89980 * 179.76221 * 25 24 23 45 45 H 1.08996 * 113.61199 * 139.97325 * 27 19 18 46 46 H 1.08996 * 113.61879 * 270.88830 * 27 19 18 47 47 H 1.07995 * 120.03307 * 179.73211 * 28 10 6 48 48 H 1.07997 * 119.97135 * 180.27019 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9312 -0.7105 -1.2305 5 6 1.5966 -2.0340 -1.4480 6 6 2.0554 -2.6875 -2.5757 7 7 1.6972 -4.1046 -2.8077 8 8 0.9972 -4.6952 -2.0047 9 8 2.1023 -4.6803 -3.8017 10 6 2.8530 -2.0145 -3.4894 11 8 3.3060 -2.6552 -4.5991 12 6 4.1220 -1.8999 -5.4966 13 6 4.5264 -2.7685 -6.6597 14 8 4.1530 -3.9211 -6.7145 15 7 5.3039 -2.2649 -7.6386 16 6 5.6976 -3.1095 -8.7691 17 1 5.0106 -3.9390 -8.9370 18 6 6.0294 -2.3167 -10.0443 19 6 7.1905 -3.3016 -10.2601 20 1 6.9132 -4.1838 -10.8371 21 6 8.4713 -2.6371 -10.7691 22 7 9.4744 -3.6657 -11.0557 23 6 10.1163 -3.8435 -12.2292 24 6 10.9603 -4.8910 -12.0832 25 6 10.8226 -5.3759 -10.7785 26 7 9.9321 -4.6422 -10.1616 27 6 7.1769 -3.5287 -8.7392 28 6 3.1922 -0.6878 -3.2659 29 6 2.7262 -0.0373 -2.1400 30 1 -0.3933 0.4417 -0.7651 31 1 1.7922 -0.5139 0.8900 32 1 1.5616 2.4678 1.2085 33 1 3.5346 1.7702 -0.0322 34 1 0.9752 -2.5574 -0.7364 35 1 5.0136 -1.5542 -4.9735 36 1 3.5600 -1.0409 -5.8632 37 1 5.6029 -1.3431 -7.5947 38 1 6.3542 -1.2943 -9.8507 39 1 5.2564 -2.3783 -10.8103 40 1 8.2536 -2.0782 -11.6791 41 1 8.8550 -1.9574 -10.0083 42 1 9.9821 -3.2538 -13.1241 43 1 11.6203 -5.2858 -12.8415 44 1 11.3590 -6.2114 -10.3535 45 1 7.3301 -4.5689 -8.4517 46 1 7.8154 -2.8378 -8.1887 47 1 3.8167 -0.1630 -3.9737 48 1 2.9864 0.9966 -1.9678 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:36:47 Heat of formation + Delta-G solvation = 47.231932 kcal Electronic energy + Delta-G solvation = -34701.746351 eV Core-core repulsion = 29730.835561 eV Total energy + Delta-G solvation = -4970.910790 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.151 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -43.02344 -42.09429 -41.77846 -41.11418 -39.99122 -39.10214 -37.54148 -37.12143 -35.26534 -33.72265 -33.45640 -32.39060 -30.99100 -30.22719 -28.40751 -27.59974 -26.89669 -26.72912 -24.68359 -23.74440 -22.80950 -21.96301 -21.91409 -21.52398 -20.85250 -20.47018 -19.44839 -19.23840 -18.52207 -18.34457 -18.28950 -18.21316 -17.67375 -17.41703 -17.06755 -16.60121 -16.52497 -16.31992 -15.84863 -15.78376 -15.65490 -15.32182 -15.04794 -14.95497 -14.90696 -14.20356 -14.13210 -13.99945 -13.88450 -13.72805 -13.58739 -13.53376 -13.31766 -13.10710 -12.58541 -12.42512 -12.35069 -12.19762 -12.13101 -12.00658 -11.84975 -11.73243 -11.63355 -11.44788 -10.96296 -10.94478 -10.77892 -10.31946 -10.20194 -9.91593 -9.49220 -5.32001 -1.13932 -0.39221 0.37600 0.53037 0.98424 1.00261 1.08229 1.34796 1.37949 1.56517 1.74199 1.92490 1.99573 2.19004 2.97368 3.00729 3.14324 3.18948 3.22994 3.26165 3.36920 3.48172 3.53281 3.54919 3.56221 3.66444 3.70057 3.87974 3.92185 4.02453 4.12144 4.13568 4.14643 4.23989 4.29405 4.41686 4.45457 4.53785 4.60930 4.66449 4.71254 4.78906 4.89407 4.91441 5.02192 5.04845 5.14369 5.33886 5.44733 5.70128 5.76844 6.08711 6.22798 6.31645 6.82057 6.93676 7.01031 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.066 4.066 3 Si 0.693 3.307 4 C -0.158 4.158 5 C 0.009 3.991 6 C -0.075 4.075 7 N 0.028 4.972 8 O -0.177 6.177 9 O -0.118 6.118 10 C 0.200 3.800 11 O -0.253 6.253 12 C 0.030 3.970 13 C 0.514 3.486 14 O -0.494 6.494 15 N -0.717 5.717 16 C 0.124 3.876 17 H 0.120 0.880 18 C -0.137 4.137 19 C -0.119 4.119 20 H 0.101 0.899 21 C 0.146 3.854 22 N -0.373 5.373 23 C 0.050 3.950 24 C -0.274 4.274 25 C 0.043 3.957 26 N -0.290 5.290 27 C -0.134 4.134 28 C -0.209 4.209 29 C -0.025 4.025 30 H 0.381 0.619 31 H 0.121 0.879 32 H -0.248 1.248 33 H -0.254 1.254 34 H 0.165 0.835 35 H 0.101 0.899 36 H 0.102 0.898 37 H 0.402 0.598 38 H 0.091 0.909 39 H 0.082 0.918 40 H 0.098 0.902 41 H 0.085 0.915 42 H 0.172 0.828 43 H 0.147 0.853 44 H 0.182 0.818 45 H 0.079 0.921 46 H 0.086 0.914 47 H 0.156 0.844 48 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.234 12.528 -5.249 13.963 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.176 4.176 3 Si 0.593 3.407 4 C -0.159 4.159 5 C -0.010 4.010 6 C -0.160 4.160 7 N 0.548 4.452 8 O -0.385 6.385 9 O -0.342 6.342 10 C 0.150 3.850 11 O -0.162 6.162 12 C -0.048 4.048 13 C 0.297 3.703 14 O -0.366 6.366 15 N -0.371 5.371 16 C 0.020 3.980 17 H 0.138 0.862 18 C -0.176 4.176 19 C -0.139 4.139 20 H 0.119 0.881 21 C 0.024 3.976 22 N -0.156 5.156 23 C -0.096 4.096 24 C -0.303 4.303 25 C -0.144 4.144 26 N -0.111 5.111 27 C -0.173 4.173 28 C -0.228 4.228 29 C -0.043 4.043 30 H 0.229 0.771 31 H 0.138 0.862 32 H -0.173 1.173 33 H -0.179 1.179 34 H 0.182 0.818 35 H 0.119 0.881 36 H 0.120 0.880 37 H 0.236 0.764 38 H 0.110 0.890 39 H 0.101 0.899 40 H 0.116 0.884 41 H 0.104 0.896 42 H 0.190 0.810 43 H 0.165 0.835 44 H 0.199 0.801 45 H 0.098 0.902 46 H 0.105 0.895 47 H 0.174 0.826 48 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.879 12.728 -3.082 13.408 hybrid contribution 0.833 -0.437 -0.789 1.227 sum 3.712 12.291 -3.870 13.410 Atomic orbital electron populations 1.86563 1.16583 1.81609 1.49327 1.25102 0.85693 1.10257 0.96575 0.94913 0.80680 0.76988 0.88076 1.20316 1.02262 0.93993 0.99355 1.20837 0.93502 0.93553 0.93067 1.20590 1.10590 0.84052 1.00760 1.43339 0.99193 1.02283 1.00356 1.94557 1.35262 1.66681 1.42041 1.94702 1.54666 1.67575 1.17220 1.18698 0.89879 0.90802 0.85612 1.86509 1.62823 1.37504 1.29412 1.22744 0.96340 0.94945 0.90787 1.19855 0.79096 0.88182 0.83122 1.90872 1.52382 1.17052 1.76310 1.45764 1.52635 1.15796 1.22906 1.22583 0.96434 0.94597 0.84385 0.86242 1.23390 0.97882 0.98790 0.97516 1.22632 0.93676 0.99697 0.97854 0.88086 1.21722 0.85786 0.87493 1.02578 1.48721 1.32521 1.25589 1.08756 1.22606 0.96034 0.99813 0.91155 1.21565 1.07744 1.02050 0.98963 1.23959 0.96926 0.99681 0.93793 1.77398 1.15606 1.01937 1.16165 1.23454 0.95601 1.03484 0.94759 1.21267 1.07011 0.92719 1.01841 1.21269 0.91887 0.99804 0.91331 0.77135 0.86155 1.17265 1.17931 0.81801 0.88085 0.87980 0.76391 0.89040 0.89898 0.88355 0.89644 0.81036 0.83543 0.80077 0.90228 0.89519 0.82608 0.83406 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.89 12.77 -35.23 -0.45 0.44 16 2 C -0.07 0.17 2.82 36.01 0.10 0.27 16 3 Si 0.69 -2.68 29.78 -169.99 -5.06 -7.75 16 4 C -0.16 0.34 5.39 -104.60 -0.56 -0.22 16 5 C 0.01 0.00 9.11 -39.61 -0.36 -0.36 16 6 C -0.08 -0.21 6.87 -79.81 -0.55 -0.76 16 7 N 0.03 0.19 4.45 34.03 0.15 0.34 16 8 O -0.18 -1.31 18.45 -29.46 -0.54 -1.85 16 9 O -0.12 -1.03 17.24 -36.49 -0.63 -1.66 16 10 C 0.20 0.12 6.67 -39.22 -0.26 -0.14 16 11 O -0.25 -0.54 7.68 -49.80 -0.38 -0.92 16 12 C 0.03 -0.08 5.22 36.00 0.19 0.11 16 13 C 0.51 0.21 7.91 -10.99 -0.09 0.12 16 14 O -0.49 -3.09 16.10 -14.36 -0.23 -3.32 16 15 N -0.72 2.15 5.35 -53.01 -0.28 1.87 16 16 C 0.12 -0.23 4.24 -67.11 -0.28 -0.51 16 17 H 0.12 0.07 7.46 -51.93 -0.39 -0.32 16 18 C -0.14 0.61 7.39 -25.92 -0.19 0.42 16 19 C -0.12 0.31 3.83 -89.80 -0.34 -0.04 16 20 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 21 C 0.15 -0.41 6.35 -4.04 -0.03 -0.44 16 22 N -0.37 -0.20 3.68 -61.36 -0.23 -0.42 16 23 C 0.05 -0.01 11.45 -17.23 -0.20 -0.21 16 24 C -0.27 -0.18 10.80 -40.01 -0.43 -0.61 16 25 C 0.04 0.08 12.02 -17.37 -0.21 -0.13 16 26 N -0.29 -0.87 12.42 30.62 0.38 -0.49 16 27 C -0.13 0.16 7.43 -25.92 -0.19 -0.03 16 28 C -0.21 0.73 9.04 -39.43 -0.36 0.37 16 29 C -0.03 0.10 8.66 -39.60 -0.34 -0.24 16 30 H 0.38 -2.16 8.70 45.56 0.40 -1.77 16 31 H 0.12 -0.25 7.96 -51.93 -0.41 -0.67 16 32 H -0.25 0.02 7.11 56.52 0.40 0.42 16 33 H -0.25 0.52 7.11 56.52 0.40 0.92 16 34 H 0.16 0.10 7.61 -52.49 -0.40 -0.30 16 35 H 0.10 -0.59 7.65 -51.93 -0.40 -0.98 16 36 H 0.10 -0.64 7.67 -51.93 -0.40 -1.04 16 37 H 0.40 -2.69 8.73 -40.82 -0.36 -3.04 16 38 H 0.09 -0.58 8.08 -51.93 -0.42 -1.00 16 39 H 0.08 -0.36 8.14 -51.93 -0.42 -0.79 16 40 H 0.10 -0.51 8.07 -51.93 -0.42 -0.93 16 41 H 0.09 -0.29 7.84 -51.93 -0.41 -0.69 16 42 H 0.17 -0.62 8.06 -52.48 -0.42 -1.05 16 43 H 0.15 -0.15 8.06 -52.49 -0.42 -0.58 16 44 H 0.18 -0.11 8.06 -52.48 -0.42 -0.54 16 45 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 46 H 0.09 -0.15 7.90 -51.93 -0.41 -0.56 16 47 H 0.16 -1.11 6.30 -52.49 -0.33 -1.44 16 48 H 0.15 -1.00 4.87 -52.49 -0.26 -1.25 16 LS Contribution 414.79 15.07 6.25 6.25 Total: 0.00 -15.27 414.79 -11.07 -26.34 By element: Atomic # 1 Polarization: -10.49 SS G_CDS: -5.93 Total: -16.42 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: -4.11 Total: -2.41 kcal Atomic # 7 Polarization: 1.27 SS G_CDS: 0.02 Total: 1.30 kcal Atomic # 8 Polarization: -5.08 SS G_CDS: -2.24 Total: -7.31 kcal Atomic # 14 Polarization: -2.68 SS G_CDS: -5.06 Total: -7.75 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -15.27 -11.07 -26.34 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.573 kcal (2) G-P(sol) polarization free energy of solvation -15.275 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.298 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.066 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.341 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.232 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds