Wall clock time and date at job start Sun Mar 7 2021 02:36:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86301 * 109.47127 * 2 1 4 4 C 1.50701 * 109.46758 * 240.00090 * 2 1 3 5 5 C 1.38268 * 119.94242 * 299.99722 * 4 2 1 6 6 C 1.38145 * 120.05130 * 180.02562 * 5 4 2 7 7 C 1.38729 * 119.94828 * 0.02562 * 6 5 4 8 8 O 1.35896 * 120.05726 * 180.02562 * 7 6 5 9 9 C 1.42903 * 117.00134 * 180.02562 * 8 7 6 10 10 F 1.39906 * 109.46990 * 60.00332 * 9 8 7 11 11 F 1.39894 * 109.47141 * 300.00236 * 9 8 7 12 12 C 1.50697 * 109.46999 * 180.02562 * 9 8 7 13 13 O 1.21277 * 120.00380 * 0.02562 * 12 9 8 14 14 N 1.34783 * 119.99634 * 180.02562 * 12 9 8 15 15 C 1.46497 * 120.00010 * 180.02562 * 14 12 9 16 16 H 1.09003 * 112.91098 * 23.74319 * 15 14 12 17 17 C 1.53781 * 113.61743 * 154.99700 * 15 14 12 18 18 C 1.53784 * 87.07881 * 139.98129 * 17 15 14 19 19 H 1.09000 * 113.61371 * 89.20494 * 18 17 15 20 20 C 1.53006 * 113.61038 * 220.02057 * 18 17 15 21 21 N 1.46498 * 109.47010 * 185.00489 * 20 18 17 22 22 C 1.34941 * 126.03980 * 125.00325 * 21 20 18 23 23 C 1.35325 * 107.74555 * 180.02562 * 22 21 20 24 24 C 1.39868 * 107.91737 * 0.26206 * 23 22 21 25 25 N 1.30842 * 108.20327 * 359.55203 * 24 23 22 26 26 C 1.53776 * 87.08153 * 334.56613 * 18 17 15 27 27 C 1.38732 * 119.88615 * 0.27978 * 7 6 5 28 28 C 1.38146 * 119.94451 * 359.46279 * 27 7 6 29 29 H 0.96695 * 113.99884 * 300.00309 * 1 2 3 30 30 H 1.09001 * 109.46862 * 119.99995 * 2 1 3 31 31 H 1.48503 * 109.99453 * 178.68249 * 3 2 1 32 32 H 1.48497 * 110.00084 * 299.99617 * 3 2 1 33 33 H 1.07997 * 119.97375 * 359.97438 * 5 4 2 34 34 H 1.08010 * 120.02426 * 179.97438 * 6 5 4 35 35 H 0.97001 * 120.00272 * 359.97438 * 14 12 9 36 36 H 1.08991 * 113.61285 * 25.42956 * 17 15 14 37 37 H 1.08998 * 113.68854 * 254.53665 * 17 15 14 38 38 H 1.08992 * 109.47371 * 64.99678 * 20 18 17 39 39 H 1.09010 * 109.46873 * 304.99765 * 20 18 17 40 40 H 1.07997 * 126.13283 * 0.03046 * 22 21 20 41 41 H 1.08002 * 126.03725 * 179.97438 * 23 22 21 42 42 H 1.08007 * 125.89524 * 179.73435 * 24 23 22 43 43 H 1.09003 * 113.61214 * 139.98084 * 26 18 17 44 44 H 1.09002 * 113.61588 * 270.88547 * 26 18 17 45 45 H 1.08001 * 120.02794 * 179.72408 * 27 7 6 46 46 H 1.08000 * 119.97022 * 180.27606 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5965 -2.0342 -1.4481 6 6 2.0561 -2.6877 -2.5751 7 6 2.8546 -2.0150 -3.4885 8 8 3.3075 -2.6556 -4.5982 9 6 4.1253 -1.9009 -5.4947 10 9 5.2699 -1.4593 -4.8221 11 9 3.4059 -0.7972 -5.9651 12 6 4.5294 -2.7695 -6.6580 13 8 4.1537 -3.9212 -6.7141 14 7 5.3084 -2.2663 -7.6360 15 6 5.7008 -3.1104 -8.7672 16 1 5.0134 -3.9393 -8.9366 17 6 6.0347 -2.3169 -10.0414 18 6 7.1940 -3.3040 -10.2577 19 1 6.9152 -4.1849 -10.8359 20 6 8.4763 -2.6414 -10.7654 21 7 9.4775 -3.6717 -11.0527 22 6 10.1235 -3.8460 -12.2246 23 6 10.9608 -4.8994 -12.0812 24 6 10.8172 -5.3890 -10.7789 25 7 9.9328 -4.6500 -10.1595 26 6 7.1792 -3.5326 -8.7371 27 6 3.1943 -0.6887 -3.2647 28 6 2.7278 -0.0379 -2.1389 29 1 -0.3933 0.4417 0.7650 30 1 1.7924 -0.5138 0.8900 31 1 3.5347 1.7701 0.0321 32 1 1.5617 2.4679 -1.2085 33 1 0.9760 -2.5579 -0.7361 34 1 1.7947 -3.7220 -2.7444 35 1 5.6086 -1.3450 -7.5913 36 1 6.3615 -1.2955 -9.8466 37 1 5.2627 -2.3753 -10.8086 38 1 8.8610 -1.9633 -10.0038 39 1 8.2602 -2.0812 -11.6752 40 1 9.9953 -3.2515 -13.1170 41 1 11.6197 -5.2952 -12.8399 42 1 11.3473 -6.2300 -10.3565 43 1 7.3303 -4.5733 -8.4506 44 1 7.8189 -2.8435 -8.1857 45 1 3.8194 -0.1640 -3.9721 46 1 2.9883 0.9959 -1.9665 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688084_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:36:50 Heat of formation + Delta-G solvation = -51.655879 kcal Electronic energy + Delta-G solvation = -34021.514851 eV Core-core repulsion = 28938.424447 eV Total energy + Delta-G solvation = -5083.090403 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.138 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -51.03176 -49.00296 -42.08985 -41.62978 -41.38405 -39.88155 -39.21262 -37.32033 -35.58340 -33.70805 -32.65999 -32.23377 -30.97836 -29.60138 -28.26190 -26.81643 -26.36930 -24.96925 -24.06802 -22.74060 -22.41251 -21.92039 -21.62288 -21.09714 -20.63552 -19.83237 -19.74022 -18.40190 -18.33348 -18.20478 -17.59701 -17.16238 -16.75551 -16.53397 -16.52870 -16.41714 -15.95288 -15.86125 -15.67817 -15.52193 -15.40443 -15.25632 -15.19354 -14.92991 -14.87632 -14.56395 -14.45088 -14.05083 -14.01256 -13.74595 -13.61047 -13.56800 -13.52119 -13.27046 -13.11404 -12.59992 -12.40620 -12.27841 -11.99122 -11.96168 -11.69837 -11.62553 -11.39654 -10.53974 -10.38887 -10.34492 -10.33718 -9.69078 -9.49145 -4.97693 -0.13925 -0.03217 0.35121 0.51433 1.00889 1.27257 1.54160 1.61228 1.67415 1.89009 1.94048 1.95638 2.28739 2.67132 3.08404 3.24534 3.25291 3.34337 3.38858 3.49786 3.56964 3.63539 3.80381 3.90889 3.93882 4.07501 4.08326 4.14167 4.23530 4.25262 4.35635 4.44069 4.53827 4.62251 4.65377 4.67347 4.75466 4.76200 4.80860 4.85744 4.91036 4.95033 4.99563 5.16253 5.18554 5.23044 5.31998 5.66729 5.74562 5.77003 6.19564 6.36605 6.79069 6.90692 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.074 4.074 3 Si 0.771 3.229 4 C -0.109 4.109 5 C -0.053 4.053 6 C -0.130 4.130 7 C 0.085 3.915 8 O -0.302 6.302 9 C 0.432 3.568 10 F -0.173 7.173 11 F -0.172 7.172 12 C 0.518 3.482 13 O -0.508 6.508 14 N -0.673 5.673 15 C 0.111 3.889 16 H 0.107 0.893 17 C -0.113 4.113 18 C -0.110 4.110 19 H 0.089 0.911 20 C 0.138 3.862 21 N -0.377 5.377 22 C 0.053 3.947 23 C -0.294 4.294 24 C 0.025 3.975 25 N -0.332 5.332 26 C -0.136 4.136 27 C -0.193 4.193 28 C -0.100 4.100 29 H 0.405 0.595 30 H 0.102 0.898 31 H -0.288 1.288 32 H -0.298 1.298 33 H 0.163 0.837 34 H 0.154 0.846 35 H 0.424 0.576 36 H 0.121 0.879 37 H 0.098 0.902 38 H 0.093 0.907 39 H 0.133 0.867 40 H 0.207 0.793 41 H 0.159 0.841 42 H 0.192 0.808 43 H 0.053 0.947 44 H 0.094 0.906 45 H 0.139 0.861 46 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.755 6.163 -1.094 6.305 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.184 4.184 3 Si 0.678 3.322 4 C -0.109 4.109 5 C -0.071 4.071 6 C -0.149 4.149 7 C 0.042 3.958 8 O -0.219 6.219 9 C 0.354 3.646 10 F -0.154 7.154 11 F -0.153 7.153 12 C 0.296 3.704 13 O -0.382 6.382 14 N -0.326 5.326 15 C 0.008 3.992 16 H 0.125 0.875 17 C -0.151 4.151 18 C -0.129 4.129 19 H 0.108 0.892 20 C 0.018 3.982 21 N -0.159 5.159 22 C -0.093 4.093 23 C -0.323 4.323 24 C -0.160 4.160 25 N -0.154 5.154 26 C -0.175 4.175 27 C -0.211 4.211 28 C -0.118 4.118 29 H 0.257 0.743 30 H 0.120 0.880 31 H -0.215 1.215 32 H -0.226 1.226 33 H 0.180 0.820 34 H 0.172 0.828 35 H 0.263 0.737 36 H 0.139 0.861 37 H 0.117 0.883 38 H 0.111 0.889 39 H 0.151 0.849 40 H 0.224 0.776 41 H 0.177 0.823 42 H 0.209 0.791 43 H 0.072 0.928 44 H 0.113 0.887 45 H 0.156 0.844 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 0.290 5.778 -1.032 5.877 hybrid contribution 0.977 -0.214 -0.899 1.345 sum 1.267 5.564 -1.930 6.024 Atomic orbital electron populations 1.86436 1.16897 1.82412 1.51535 1.24738 0.86112 1.10692 0.96841 0.94408 0.77329 0.75635 0.84846 1.19812 0.98994 0.95193 0.96913 1.21153 0.96553 0.93376 0.95989 1.20829 0.98617 1.01948 0.93471 1.19198 0.97514 0.92109 0.86944 1.86648 1.63880 1.39194 1.32187 1.21892 0.76656 0.79528 0.86502 1.93192 1.50686 1.89904 1.81618 1.93191 1.78266 1.55418 1.88450 1.19415 0.80951 0.87079 0.83000 1.90853 1.53985 1.17292 1.76043 1.45802 1.48594 1.17222 1.20951 1.22932 0.96261 0.95062 0.84960 0.87506 1.23352 0.97277 0.99440 0.95053 1.22492 0.94728 0.99812 0.95896 0.89246 1.22033 0.84668 0.86926 1.04605 1.48985 1.32751 1.25422 1.08785 1.23200 0.94830 0.99466 0.91806 1.21865 1.08871 1.02560 0.98994 1.24309 0.97058 1.00044 0.94577 1.77324 1.17031 1.03285 1.17732 1.23467 0.95169 1.02093 0.96735 1.21500 1.04897 0.93778 1.00961 1.20827 0.98043 0.99174 0.93721 0.74318 0.87991 1.21518 1.22635 0.81976 0.82816 0.73675 0.86114 0.88307 0.88920 0.84898 0.77583 0.82344 0.79107 0.92814 0.88740 0.84352 0.85495 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.62 12.74 -148.98 -1.90 -1.27 16 2 C -0.07 0.07 2.81 71.24 0.20 0.27 16 3 Si 0.77 -1.52 29.78 68.60 2.04 0.52 16 4 C -0.11 -0.59 5.42 -19.85 -0.11 -0.70 16 5 C -0.05 -0.24 9.60 22.25 0.21 -0.03 16 6 C -0.13 -0.90 9.99 22.36 0.22 -0.67 16 7 C 0.09 0.86 6.48 22.51 0.15 1.00 16 8 O -0.30 -3.49 9.60 -73.35 -0.70 -4.19 16 9 C 0.43 3.01 2.05 71.23 0.15 3.16 16 10 F -0.17 -0.96 15.28 44.97 0.69 -0.27 16 11 F -0.17 -0.91 15.31 44.97 0.69 -0.22 16 12 C 0.52 3.37 7.34 87.66 0.64 4.01 16 13 O -0.51 -7.17 16.10 16.02 0.26 -6.91 16 14 N -0.67 1.13 5.35 -440.04 -2.36 -1.23 16 15 C 0.11 -0.29 4.24 45.52 0.19 -0.09 16 16 H 0.11 0.16 7.47 -2.39 -0.02 0.15 16 17 C -0.11 1.11 7.39 31.12 0.23 1.34 16 18 C -0.11 0.61 3.83 -10.27 -0.04 0.57 16 19 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 20 C 0.14 -0.94 6.35 86.38 0.55 -0.39 16 21 N -0.38 -0.27 3.68 -348.05 -1.28 -1.55 16 22 C 0.05 -0.08 11.45 83.54 0.96 0.87 16 23 C -0.29 -0.41 10.80 21.99 0.24 -0.17 16 24 C 0.03 0.12 12.03 85.23 1.02 1.14 16 25 N -0.33 -2.35 12.42 -57.02 -0.71 -3.06 16 26 C -0.14 0.17 7.43 31.12 0.23 0.40 16 27 C -0.19 -1.70 8.26 22.37 0.18 -1.52 16 28 C -0.10 -0.76 8.66 22.25 0.19 -0.57 16 29 H 0.41 -4.76 8.74 -74.06 -0.65 -5.41 16 30 H 0.10 -0.59 7.96 -2.39 -0.02 -0.61 16 31 H -0.29 -0.98 7.11 99.48 0.71 -0.28 16 32 H -0.30 -1.77 7.11 99.48 0.71 -1.06 16 33 H 0.16 -0.04 8.06 -2.91 -0.02 -0.06 16 34 H 0.15 0.57 8.06 -2.91 -0.02 0.55 16 35 H 0.42 -3.31 8.73 -92.71 -0.81 -4.12 16 36 H 0.12 -1.75 8.08 -2.39 -0.02 -1.77 16 37 H 0.10 -1.09 8.14 -2.39 -0.02 -1.11 16 38 H 0.09 -0.71 7.84 -2.39 -0.02 -0.73 16 39 H 0.13 -1.78 8.07 -2.38 -0.02 -1.80 16 40 H 0.21 -2.01 8.06 -2.91 -0.02 -2.03 16 41 H 0.16 -0.35 8.06 -2.91 -0.02 -0.37 16 42 H 0.19 0.06 8.06 -2.91 -0.02 0.04 16 43 H 0.05 0.26 8.14 -2.39 -0.02 0.24 16 44 H 0.09 -0.20 7.90 -2.39 -0.02 -0.22 16 45 H 0.14 0.95 5.10 -2.91 -0.01 0.94 16 46 H 0.13 0.75 4.87 -2.91 -0.01 0.74 16 Total: 0.00 -28.28 398.08 1.59 -26.69 By element: Atomic # 1 Polarization: -16.78 SS G_CDS: -0.36 Total: -17.14 kcal Atomic # 6 Polarization: 3.42 SS G_CDS: 5.22 Total: 8.64 kcal Atomic # 7 Polarization: -1.49 SS G_CDS: -4.34 Total: -5.84 kcal Atomic # 8 Polarization: -10.03 SS G_CDS: -2.34 Total: -12.37 kcal Atomic # 9 Polarization: -1.87 SS G_CDS: 1.38 Total: -0.50 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: 2.04 Total: 0.52 kcal Total: -28.28 1.59 -26.69 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.966 kcal (2) G-P(sol) polarization free energy of solvation -28.283 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.250 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.594 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.690 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.656 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds