Wall clock time and date at job start Sun Mar 7 2021 02:37:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86306 * 109.47304 * 2 1 4 4 C 1.50701 * 109.47330 * 120.00429 * 2 1 3 5 5 C 1.38244 * 119.96874 * 245.29178 * 4 2 1 6 6 C 1.38288 * 120.10735 * 180.25379 * 5 4 2 7 7 C 1.38126 * 120.05387 * 359.44975 * 6 5 4 8 8 C 1.38746 * 119.94556 * 0.28104 * 7 6 5 9 9 O 1.35900 * 120.05764 * 180.02562 * 8 7 6 10 10 C 1.42902 * 116.99943 * 359.97438 * 9 8 7 11 11 C 1.50697 * 109.47207 * 180.02562 * 10 9 8 12 12 O 1.21280 * 120.00279 * 359.97438 * 11 10 9 13 13 N 1.34780 * 119.99970 * 179.97438 * 11 10 9 14 14 C 1.46497 * 120.00062 * 180.02562 * 13 11 10 15 15 H 1.08998 * 112.85184 * 336.19077 * 14 13 11 16 16 C 1.53782 * 113.61416 * 107.50292 * 14 13 11 17 17 C 1.53786 * 87.08029 * 139.98279 * 16 14 13 18 18 H 1.08994 * 113.69118 * 89.12692 * 17 16 14 19 19 C 1.53000 * 113.61441 * 220.01877 * 17 16 14 20 20 N 1.46497 * 109.47285 * 272.50018 * 19 17 16 21 21 C 1.34939 * 126.04538 * 124.99971 * 20 19 17 22 22 C 1.35310 * 107.75037 * 179.97438 * 21 20 19 23 23 C 1.39869 * 107.92362 * 359.97438 * 22 21 20 24 24 N 1.30843 * 108.19505 * 359.74705 * 23 22 21 25 25 C 1.53783 * 113.61437 * 205.00280 * 14 13 11 26 26 C 1.38166 * 119.97212 * 64.99802 * 4 2 1 27 27 H 0.96701 * 114.00473 * 59.99672 * 1 2 3 28 28 H 1.09007 * 109.46933 * 240.00527 * 2 1 3 29 29 H 1.48500 * 109.99935 * 298.68815 * 3 2 1 30 30 H 1.48495 * 109.99306 * 60.00323 * 3 2 1 31 31 H 1.07993 * 119.94966 * 0.02562 * 5 4 2 32 32 H 1.08002 * 119.97455 * 179.73146 * 6 5 4 33 33 H 1.07999 * 120.02655 * 180.25493 * 7 6 5 34 34 H 1.09002 * 109.46947 * 300.00698 * 10 9 8 35 35 H 1.08998 * 109.47276 * 60.00138 * 10 9 8 36 36 H 0.97000 * 119.99843 * 0.02562 * 13 11 10 37 37 H 1.08998 * 113.61136 * 254.52680 * 16 14 13 38 38 H 1.08998 * 113.61248 * 25.43489 * 16 14 13 39 39 H 1.09003 * 109.46981 * 32.49668 * 19 17 16 40 40 H 1.08995 * 109.47348 * 152.49237 * 19 17 16 41 41 H 1.08002 * 126.12301 * 359.97438 * 21 20 19 42 42 H 1.08007 * 126.03856 * 179.97438 * 22 21 20 43 43 H 1.07994 * 125.89894 * 180.02562 * 23 22 21 44 44 H 1.09004 * 113.61406 * 334.56474 * 25 14 13 45 45 H 1.08993 * 113.61793 * 105.38497 * 25 14 13 46 46 H 1.08006 * 120.02868 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6335 -0.0105 2.1937 6 6 3.1003 -0.6607 3.3214 7 6 2.8562 -2.0093 3.4932 8 6 2.1469 -2.7129 2.5304 9 8 1.9049 -4.0397 2.6974 10 6 2.4107 -4.6466 3.8882 11 6 2.0489 -6.1094 3.8992 12 8 1.4194 -6.5854 2.9782 13 7 2.4248 -6.8889 4.9324 14 6 2.0736 -8.3111 4.9429 15 1 1.2023 -8.5364 4.3279 16 6 3.2695 -9.2429 4.6853 17 6 2.6808 -10.1674 5.7640 18 1 1.9763 -10.9020 5.3743 19 6 3.7358 -10.7856 6.6837 20 7 4.2332 -12.0289 6.0898 21 6 5.5243 -12.3248 5.8318 22 6 5.5629 -13.5625 5.2866 23 6 4.2505 -14.0399 5.2091 24 7 3.4531 -13.1237 5.6956 25 6 2.0050 -8.9183 6.3541 26 6 1.6845 -2.0596 1.3976 27 1 -0.3934 0.4417 -0.7650 28 1 1.7922 -0.5138 -0.8901 29 1 1.5878 2.4586 -1.2242 30 1 1.5615 2.4677 1.2085 31 1 2.8209 1.0451 2.0637 32 1 3.6524 -0.1126 4.0706 33 1 3.2174 -2.5157 4.3760 34 1 3.4951 -4.5406 3.9176 35 1 1.9742 -4.1574 4.7590 36 1 2.9280 -6.5081 5.6692 37 1 3.2734 -9.6827 3.6881 38 1 4.2299 -8.8069 4.9606 39 1 4.5628 -10.0867 6.8093 40 1 3.2904 -10.9997 7.6552 41 1 6.3745 -11.6876 6.0259 42 1 6.4504 -14.0889 4.9676 43 1 3.9481 -15.0007 4.8196 44 1 2.6197 -8.3937 7.0855 45 1 0.9881 -9.0949 6.7045 46 1 1.1321 -2.6051 0.6467 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:37:01 Heat of formation + Delta-G solvation = 41.556304 kcal Electronic energy + Delta-G solvation = -28059.645119 eV Core-core repulsion = 23919.504651 eV Total energy + Delta-G solvation = -4140.140468 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.08846 -41.58310 -40.95540 -39.67525 -38.71126 -37.35753 -35.24074 -33.63948 -32.60214 -31.68385 -30.97699 -29.63020 -28.26104 -26.94471 -26.78583 -24.34174 -23.65089 -22.47505 -22.06496 -21.61451 -21.56253 -20.56243 -19.17682 -18.53548 -18.45883 -18.12271 -17.55070 -17.46787 -17.16478 -16.80055 -16.41512 -16.18199 -15.82388 -15.60459 -15.46873 -15.19962 -14.80406 -14.58444 -14.54761 -14.26230 -14.05131 -13.77584 -13.73421 -13.70919 -13.63074 -13.44356 -13.33051 -12.99718 -12.49737 -12.41076 -12.17171 -12.01397 -11.98375 -11.66257 -11.63322 -11.49908 -10.90853 -10.52954 -10.30477 -10.20384 -9.90633 -9.46936 -9.25104 -4.97340 0.21094 0.42560 1.00875 1.23525 1.42011 1.43741 1.57919 1.59252 1.94138 2.00270 2.51856 2.63643 3.20017 3.30298 3.33055 3.36842 3.43999 3.59006 3.72227 3.77334 3.79831 3.87576 3.88103 3.93398 4.00819 4.04411 4.20502 4.22291 4.23849 4.33001 4.40723 4.51675 4.54366 4.57067 4.61625 4.72252 4.80429 4.85982 4.90700 4.98067 5.08143 5.15181 5.23626 5.35963 5.36278 5.47835 5.65187 5.77556 6.09874 6.21051 6.36225 6.43468 6.82258 7.04491 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.079 4.079 3 Si 0.689 3.311 4 C -0.033 4.033 5 C -0.151 4.151 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.128 3.872 9 O -0.288 6.288 10 C 0.040 3.960 11 C 0.516 3.484 12 O -0.510 6.510 13 N -0.718 5.718 14 C 0.127 3.873 15 H 0.119 0.881 16 C -0.146 4.146 17 C -0.120 4.120 18 H 0.111 0.889 19 C 0.146 3.854 20 N -0.371 5.371 21 C 0.051 3.949 22 C -0.274 4.274 23 C 0.045 3.955 24 N -0.295 5.295 25 C -0.137 4.137 26 C -0.119 4.119 27 H 0.381 0.619 28 H 0.079 0.921 29 H -0.261 1.261 30 H -0.255 1.255 31 H 0.130 0.870 32 H 0.132 0.868 33 H 0.130 0.870 34 H 0.095 0.905 35 H 0.095 0.905 36 H 0.402 0.598 37 H 0.075 0.925 38 H 0.087 0.913 39 H 0.096 0.904 40 H 0.088 0.912 41 H 0.172 0.828 42 H 0.147 0.853 43 H 0.183 0.817 44 H 0.091 0.909 45 H 0.084 0.916 46 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.773 2.670 4.132 8.371 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.189 4.189 3 Si 0.590 3.410 4 C -0.033 4.033 5 C -0.169 4.169 6 C -0.091 4.091 7 C -0.225 4.225 8 C 0.083 3.917 9 O -0.201 6.201 10 C -0.038 4.038 11 C 0.301 3.699 12 O -0.383 6.383 13 N -0.372 5.372 14 C 0.022 3.978 15 H 0.137 0.863 16 C -0.185 4.185 17 C -0.140 4.140 18 H 0.129 0.871 19 C 0.025 3.975 20 N -0.154 5.154 21 C -0.095 4.095 22 C -0.304 4.304 23 C -0.141 4.141 24 N -0.117 5.117 25 C -0.175 4.175 26 C -0.138 4.138 27 H 0.229 0.771 28 H 0.097 0.903 29 H -0.186 1.186 30 H -0.180 1.180 31 H 0.147 0.853 32 H 0.150 0.850 33 H 0.148 0.852 34 H 0.113 0.887 35 H 0.113 0.887 36 H 0.237 0.763 37 H 0.094 0.906 38 H 0.105 0.895 39 H 0.115 0.885 40 H 0.106 0.894 41 H 0.189 0.811 42 H 0.165 0.835 43 H 0.200 0.800 44 H 0.110 0.890 45 H 0.102 0.898 46 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 4.813 3.178 4.194 7.131 hybrid contribution 0.245 -0.217 -0.082 0.337 sum 5.058 2.961 4.112 7.160 Atomic orbital electron populations 1.86602 1.17567 1.80215 1.49780 1.24866 0.84689 1.11176 0.98135 0.94963 0.91600 0.74258 0.80179 1.19027 0.96796 0.92719 0.94778 1.20932 1.01472 0.99812 0.94703 1.20878 0.97697 0.93560 0.96933 1.21278 1.04786 0.96077 1.00331 1.18999 0.95479 0.82419 0.94807 1.86173 1.73807 1.20122 1.39986 1.22467 1.00672 0.91836 0.88866 1.20102 0.79655 0.87470 0.82673 1.90794 1.37898 1.74777 1.34866 1.45797 1.58296 1.09745 1.23314 1.22501 0.99067 0.78286 0.97909 0.86270 1.23572 0.98395 0.96467 1.00086 1.22705 0.98138 0.96270 0.96866 0.87126 1.21722 0.97960 0.81471 0.96380 1.48695 1.04487 1.13768 1.48409 1.22574 0.88097 0.98171 1.00618 1.21560 0.98562 0.97221 1.13052 1.23936 0.91891 0.99163 0.99154 1.77346 1.19434 0.95210 1.19690 1.23380 1.02368 0.95472 0.96325 1.20251 1.02509 0.93741 0.97285 0.77128 0.90310 1.18625 1.17958 0.85282 0.84996 0.85228 0.88713 0.88740 0.76283 0.90631 0.89498 0.88548 0.89430 0.81102 0.83532 0.80028 0.89045 0.89777 0.84762 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.07 12.81 -35.23 -0.45 -1.52 16 2 C -0.08 -0.04 2.79 36.01 0.10 0.06 16 3 Si 0.69 -0.53 29.86 -169.99 -5.08 -5.61 16 4 C -0.03 -0.07 5.38 -104.65 -0.56 -0.63 16 5 C -0.15 -0.10 8.67 -39.56 -0.34 -0.44 16 6 C -0.07 0.02 10.04 -39.60 -0.40 -0.38 16 7 C -0.21 -0.01 9.04 -39.43 -0.36 -0.37 16 8 C 0.13 0.32 6.69 -39.22 -0.26 0.06 16 9 O -0.29 -0.98 9.67 -39.33 -0.38 -1.36 16 10 C 0.04 -0.04 5.22 36.00 0.19 0.15 16 11 C 0.52 0.68 7.91 -10.99 -0.09 0.59 16 12 O -0.51 -3.39 16.10 -14.35 -0.23 -3.63 16 13 N -0.72 1.62 5.35 -53.02 -0.28 1.34 16 14 C 0.13 -0.18 4.24 -67.12 -0.28 -0.46 16 15 H 0.12 0.13 7.46 -51.93 -0.39 -0.26 16 16 C -0.15 0.24 7.43 -25.92 -0.19 0.05 16 17 C -0.12 0.24 3.87 -89.80 -0.35 -0.10 16 18 H 0.11 0.03 7.97 -51.93 -0.41 -0.38 16 19 C 0.15 -0.34 6.35 -4.04 -0.03 -0.37 16 20 N -0.37 -0.33 3.68 -61.37 -0.23 -0.56 16 21 C 0.05 0.00 11.45 -17.23 -0.20 -0.20 16 22 C -0.27 -0.24 10.80 -40.02 -0.43 -0.67 16 23 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 24 N -0.30 -1.01 12.28 30.62 0.38 -0.63 16 25 C -0.14 0.49 7.39 -25.91 -0.19 0.30 16 26 C -0.12 -0.38 9.62 -39.43 -0.38 -0.76 16 27 H 0.38 -0.82 8.74 45.56 0.40 -0.42 16 28 H 0.08 -0.08 7.96 -51.93 -0.41 -0.49 16 29 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 30 H -0.25 -0.55 7.04 56.52 0.40 -0.16 16 31 H 0.13 -0.14 4.86 -52.49 -0.26 -0.40 16 32 H 0.13 -0.38 8.06 -52.49 -0.42 -0.80 16 33 H 0.13 -0.37 6.30 -52.49 -0.33 -0.71 16 34 H 0.10 -0.35 7.66 -51.93 -0.40 -0.75 16 35 H 0.09 -0.32 7.66 -51.93 -0.40 -0.72 16 36 H 0.40 -2.33 8.73 -40.82 -0.36 -2.68 16 37 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 38 H 0.09 -0.26 7.90 -51.93 -0.41 -0.67 16 39 H 0.10 -0.47 7.77 -51.93 -0.40 -0.87 16 40 H 0.09 -0.23 8.14 -51.93 -0.42 -0.66 16 41 H 0.17 -0.58 8.06 -52.49 -0.42 -1.00 16 42 H 0.15 -0.13 8.06 -52.48 -0.42 -0.55 16 43 H 0.18 -0.11 8.06 -52.49 -0.42 -0.53 16 44 H 0.09 -0.51 8.08 -51.93 -0.42 -0.93 16 45 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 46 H 0.13 0.48 8.06 -52.48 -0.42 0.05 16 LS Contribution 388.61 15.07 5.86 5.86 Total: 0.00 -12.53 388.61 -10.77 -23.30 By element: Atomic # 1 Polarization: -7.53 SS G_CDS: -6.37 Total: -13.90 kcal Atomic # 6 Polarization: 0.70 SS G_CDS: -3.98 Total: -3.28 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -0.13 Total: 0.15 kcal Atomic # 8 Polarization: -5.44 SS G_CDS: -1.06 Total: -6.51 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: -5.08 Total: -5.61 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -12.53 -10.77 -23.30 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.853 kcal (2) G-P(sol) polarization free energy of solvation -12.530 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.323 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.766 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.296 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.556 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds