Wall clock time and date at job start Sun Mar 7 2021 02:37:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35986 * 117.00178 * 2 1 4 4 C 1.38674 * 120.00578 * 180.27322 * 3 2 1 5 5 C 1.38149 * 120.00237 * 180.25316 * 4 3 2 6 6 C 1.50693 * 120.00010 * 179.77269 * 5 4 3 7 7 O 1.42908 * 109.47184 * 254.72014 * 6 5 4 8 8 Si 1.86298 * 109.47618 * 14.72027 * 6 5 4 9 9 C 1.38676 * 119.99968 * 359.48833 * 5 4 3 10 10 O 1.35980 * 120.00248 * 180.25592 * 9 5 4 11 11 C 1.42901 * 116.99958 * 180.02562 * 10 9 5 12 12 C 1.50699 * 109.46826 * 179.97438 * 11 10 9 13 13 O 1.21286 * 120.00315 * 359.97438 * 12 11 10 14 14 N 1.34785 * 120.00227 * 179.97438 * 12 11 10 15 15 C 1.46495 * 120.00310 * 179.97438 * 14 12 11 16 16 H 1.09002 * 112.85168 * 336.19719 * 15 14 12 17 17 C 1.53786 * 113.61272 * 107.49998 * 15 14 12 18 18 C 1.53783 * 87.07709 * 139.98125 * 17 15 14 19 19 H 1.08999 * 113.61304 * 89.11736 * 18 17 15 20 20 C 1.53006 * 113.68921 * 220.00780 * 18 17 15 21 21 N 1.46501 * 109.46745 * 272.53631 * 20 18 17 22 22 C 1.34950 * 126.03160 * 124.72007 * 21 20 18 23 23 C 1.35321 * 107.74041 * 179.83661 * 22 21 20 24 24 C 1.39860 * 107.92224 * 0.42061 * 23 22 21 25 25 N 1.30842 * 108.20579 * 359.73966 * 24 23 22 26 26 C 1.53776 * 113.61405 * 204.99784 * 15 14 12 27 27 C 1.38723 * 119.99847 * 0.23827 * 9 5 4 28 28 C 1.38104 * 120.00143 * 0.02562 * 27 9 5 29 29 H 1.09001 * 109.47077 * 179.97438 * 1 2 3 30 30 H 1.08992 * 109.47123 * 300.00444 * 1 2 3 31 31 H 1.09004 * 109.46702 * 60.00581 * 1 2 3 32 32 H 1.08008 * 119.99771 * 0.02612 * 4 3 2 33 33 H 1.09004 * 109.47724 * 134.72481 * 6 5 4 34 34 H 0.96699 * 113.99775 * 299.99786 * 7 6 5 35 35 H 1.48506 * 109.99834 * 298.68714 * 8 6 5 36 36 H 1.48502 * 110.00011 * 59.99978 * 8 6 5 37 37 H 1.08998 * 109.46683 * 299.99438 * 11 10 9 38 38 H 1.08996 * 109.47746 * 59.99927 * 11 10 9 39 39 H 0.96995 * 119.99072 * 359.97438 * 14 12 11 40 40 H 1.08996 * 113.61606 * 254.52964 * 17 15 14 41 41 H 1.08993 * 113.61481 * 25.43527 * 17 15 14 42 42 H 1.08991 * 109.46964 * 32.53447 * 20 18 17 43 43 H 1.08996 * 109.46763 * 152.53659 * 20 18 17 44 44 H 1.07993 * 126.13144 * 359.97438 * 22 21 20 45 45 H 1.07999 * 126.03578 * 180.16339 * 23 22 21 46 46 H 1.08000 * 125.90242 * 179.76105 * 24 23 22 47 47 H 1.09001 * 113.61505 * 334.56798 * 26 15 14 48 48 H 1.09000 * 113.61505 * 105.47162 * 26 15 14 49 49 H 1.07995 * 119.99763 * 180.02562 * 27 9 5 50 50 H 1.08000 * 120.00178 * 179.97438 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2843 -0.0057 5 6 4.0584 2.5152 -0.0004 6 6 5.5632 2.5941 -0.0015 7 8 6.0216 2.9674 1.2996 8 14 6.2720 0.9324 -0.4564 9 6 3.3031 3.6782 -0.0001 10 8 3.9203 4.8899 -0.0002 11 6 3.0803 6.0459 0.0007 12 6 3.9345 7.2874 0.0011 13 8 5.1436 7.1917 0.0012 14 7 3.3549 8.5043 0.0015 15 6 4.1852 9.7112 0.0025 16 1 5.1821 9.5388 0.4082 17 6 4.1859 10.4595 -1.3411 18 6 4.1371 11.7624 -0.5256 19 1 5.1214 12.1517 -0.2652 20 6 3.2160 12.8278 -1.1237 21 7 3.9634 13.6296 -2.0956 22 6 3.6235 13.8331 -3.3856 23 6 4.5670 14.6292 -3.9401 24 6 5.5210 14.9141 -2.9578 25 7 5.1603 14.3155 -1.8517 26 6 3.4820 10.9422 0.5982 27 6 1.9177 3.6056 -0.0001 28 6 1.2908 2.3751 0.0001 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5139 0.8899 31 1 -0.3633 0.5138 -0.8901 32 1 4.0195 0.3785 -0.0106 33 1 5.8876 3.3388 -0.7284 34 1 5.6912 3.8244 1.6021 35 1 5.8632 -0.0855 0.5448 36 1 5.8029 0.5327 -1.8075 37 1 2.4506 6.0380 -0.8889 38 1 2.4516 6.0376 0.8910 39 1 2.3880 8.5808 0.0011 40 1 5.1072 10.3347 -1.9099 41 1 3.2913 10.2847 -1.9386 42 1 2.3759 12.3438 -1.6214 43 1 2.8441 13.4742 -0.3287 44 1 2.7531 13.4343 -3.8853 45 1 4.5828 14.9788 -4.9617 46 1 6.4029 15.5234 -3.0895 47 1 2.3949 10.8993 0.5307 48 1 3.8351 11.2071 1.5948 49 1 1.3296 4.5113 -0.0003 50 1 0.2122 2.3185 0.0005 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:37:06 Heat of formation + Delta-G solvation = 4.437711 kcal Electronic energy + Delta-G solvation = -32923.134550 eV Core-core repulsion = 28307.164687 eV Total energy + Delta-G solvation = -4615.969862 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.11747 -41.88752 -41.23162 -40.24218 -39.38481 -37.99776 -36.86217 -35.28702 -33.67100 -32.84236 -31.22073 -30.96605 -29.77278 -28.41384 -28.06703 -26.97774 -26.51220 -24.63219 -23.50959 -22.43583 -22.08870 -21.86544 -21.59582 -20.60953 -19.60133 -18.87560 -18.60869 -18.26584 -17.93606 -17.62209 -17.49024 -17.25783 -16.76448 -16.46637 -16.26002 -16.04178 -15.73035 -15.63797 -15.47074 -15.15460 -15.12451 -14.64643 -14.57169 -14.28344 -14.16455 -13.88658 -13.80771 -13.73552 -13.65472 -13.47833 -13.42664 -13.11972 -13.05645 -12.70126 -12.45043 -12.30302 -12.04521 -12.00016 -11.66754 -11.58524 -11.51951 -11.13716 -10.96971 -10.87893 -10.32997 -10.24894 -10.14912 -9.48881 -8.88154 -4.69345 0.00530 0.28775 0.98764 1.31724 1.36100 1.50768 1.55691 1.78700 1.98510 2.08720 2.20223 2.43808 2.49887 3.16119 3.26933 3.31158 3.36983 3.48662 3.54060 3.58660 3.68925 3.76248 3.78789 3.90483 3.91355 3.97886 4.01865 4.06893 4.09369 4.11902 4.19144 4.26517 4.30523 4.37120 4.43259 4.48746 4.51261 4.53924 4.58579 4.69106 4.77134 4.82724 4.88701 4.98502 5.04103 5.05129 5.11684 5.13401 5.30682 5.34735 5.75778 6.01187 6.07830 6.21940 6.32395 6.74449 6.80364 6.97612 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.316 6.316 3 C 0.104 3.896 4 C -0.115 4.115 5 C -0.096 4.096 6 C -0.076 4.076 7 O -0.533 6.533 8 Si 0.747 3.253 9 C 0.102 3.898 10 O -0.288 6.288 11 C 0.040 3.960 12 C 0.517 3.483 13 O -0.508 6.508 14 N -0.718 5.718 15 C 0.127 3.873 16 H 0.120 0.880 17 C -0.147 4.147 18 C -0.120 4.120 19 H 0.111 0.889 20 C 0.146 3.854 21 N -0.371 5.371 22 C 0.051 3.949 23 C -0.274 4.274 24 C 0.045 3.955 25 N -0.295 5.295 26 C -0.137 4.137 27 C -0.164 4.164 28 C -0.164 4.164 29 H 0.103 0.897 30 H 0.057 0.943 31 H 0.056 0.944 32 H 0.139 0.861 33 H 0.080 0.920 34 H 0.368 0.632 35 H -0.251 1.251 36 H -0.249 1.249 37 H 0.093 0.907 38 H 0.094 0.906 39 H 0.402 0.598 40 H 0.075 0.925 41 H 0.086 0.914 42 H 0.096 0.904 43 H 0.088 0.912 44 H 0.172 0.828 45 H 0.147 0.853 46 H 0.183 0.817 47 H 0.091 0.909 48 H 0.084 0.916 49 H 0.135 0.865 50 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.671 2.446 -1.585 8.206 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.059 3.941 4 C -0.133 4.133 5 C -0.097 4.097 6 C -0.184 4.184 7 O -0.338 6.338 8 Si 0.646 3.354 9 C 0.057 3.943 10 O -0.201 6.201 11 C -0.039 4.039 12 C 0.301 3.699 13 O -0.382 6.382 14 N -0.371 5.371 15 C 0.023 3.977 16 H 0.138 0.862 17 C -0.185 4.185 18 C -0.140 4.140 19 H 0.129 0.871 20 C 0.025 3.975 21 N -0.154 5.154 22 C -0.095 4.095 23 C -0.304 4.304 24 C -0.141 4.141 25 N -0.116 5.116 26 C -0.176 4.176 27 C -0.183 4.183 28 C -0.183 4.183 29 H 0.122 0.878 30 H 0.075 0.925 31 H 0.075 0.925 32 H 0.156 0.844 33 H 0.098 0.902 34 H 0.216 0.784 35 H -0.176 1.176 36 H -0.173 1.173 37 H 0.111 0.889 38 H 0.112 0.888 39 H 0.237 0.763 40 H 0.094 0.906 41 H 0.104 0.896 42 H 0.114 0.886 43 H 0.106 0.894 44 H 0.189 0.811 45 H 0.165 0.835 46 H 0.200 0.800 47 H 0.109 0.891 48 H 0.103 0.897 49 H 0.152 0.848 50 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -6.162 0.505 -0.506 6.204 hybrid contribution -2.887 1.617 -0.798 3.404 sum -9.050 2.122 -1.304 9.386 Atomic orbital electron populations 1.23111 0.77942 1.04454 1.01374 1.86116 1.21684 1.26269 1.88880 1.18803 0.91826 0.84649 0.98835 1.20130 0.91917 0.97127 1.04158 1.19494 0.96743 0.89867 1.03589 1.25215 0.90527 1.13661 0.89039 1.86698 1.73572 1.41906 1.31651 0.93095 0.91254 0.72039 0.79050 1.18618 0.90747 0.84595 1.00369 1.86119 1.33776 1.10967 1.89209 1.22469 0.93226 0.84185 1.03985 1.20056 0.88874 0.84240 0.76698 1.90799 1.14097 1.86485 1.46783 1.45799 1.10259 1.04962 1.76098 1.22508 0.96509 0.81726 0.96968 0.86192 1.23570 1.03345 0.94560 0.97062 1.22708 1.00992 0.93420 0.96867 0.87087 1.21718 0.92690 0.91834 0.91284 1.48699 1.19035 1.39107 1.08554 1.22575 1.01003 1.00344 0.85558 1.21562 0.98239 1.08663 1.01905 1.23938 1.00159 0.99372 0.90653 1.77347 0.97962 1.12628 1.23701 1.23380 1.00708 0.94267 0.99201 1.21032 0.92840 0.98668 1.05722 1.21082 1.00341 0.91448 1.05457 0.87827 0.92487 0.92524 0.84366 0.90223 0.78412 1.17580 1.17329 0.88885 0.88783 0.76323 0.90603 0.89558 0.88593 0.89406 0.81125 0.83527 0.80007 0.89075 0.89741 0.84757 0.84587 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.87 10.50 -19.70 -0.21 -1.08 16 3 C 0.10 0.31 6.69 -39.24 -0.26 0.04 16 4 C -0.12 -0.45 8.59 -39.45 -0.34 -0.79 16 5 C -0.10 -0.33 5.28 -104.50 -0.55 -0.89 16 6 C -0.08 -0.23 2.33 36.00 0.08 -0.15 16 7 O -0.53 -2.11 12.65 -35.23 -0.45 -2.55 16 8 Si 0.75 1.30 30.39 -169.99 -5.17 -3.87 16 9 C 0.10 0.22 6.62 -39.24 -0.26 -0.04 16 10 O -0.29 -0.56 8.56 -39.59 -0.34 -0.90 16 11 C 0.04 -0.07 5.22 36.00 0.19 0.11 16 12 C 0.52 0.14 7.91 -10.98 -0.09 0.06 16 13 O -0.51 -2.68 16.10 -14.36 -0.23 -2.91 16 14 N -0.72 2.11 5.35 -53.02 -0.28 1.83 16 15 C 0.13 -0.25 4.24 -67.12 -0.28 -0.54 16 16 H 0.12 0.05 7.46 -51.93 -0.39 -0.34 16 17 C -0.15 0.30 7.43 -25.92 -0.19 0.11 16 18 C -0.12 0.28 3.86 -89.80 -0.35 -0.06 16 19 H 0.11 -0.01 7.96 -51.93 -0.41 -0.42 16 20 C 0.15 -0.37 6.35 -4.04 -0.03 -0.40 16 21 N -0.37 -0.26 3.68 -61.37 -0.23 -0.48 16 22 C 0.05 -0.01 11.45 -17.22 -0.20 -0.21 16 23 C -0.27 -0.20 10.80 -40.01 -0.43 -0.63 16 24 C 0.04 0.08 12.02 -17.37 -0.21 -0.13 16 25 N -0.29 -0.94 12.27 30.62 0.38 -0.57 16 26 C -0.14 0.55 7.39 -25.92 -0.19 0.36 16 27 C -0.16 -0.02 9.03 -39.45 -0.36 -0.38 16 28 C -0.16 -0.11 9.03 -39.45 -0.36 -0.47 16 29 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 30 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 31 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 32 H 0.14 0.55 4.93 -52.48 -0.26 0.29 16 33 H 0.08 0.23 7.82 -51.93 -0.41 -0.18 16 34 H 0.37 0.94 8.60 45.56 0.39 1.34 16 35 H -0.25 -0.99 6.82 56.52 0.39 -0.61 16 36 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 37 H 0.09 -0.39 7.66 -51.93 -0.40 -0.78 16 38 H 0.09 -0.40 7.66 -51.93 -0.40 -0.80 16 39 H 0.40 -2.53 8.73 -40.82 -0.36 -2.89 16 40 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 41 H 0.09 -0.28 7.90 -51.93 -0.41 -0.69 16 42 H 0.10 -0.49 7.78 -51.93 -0.40 -0.89 16 43 H 0.09 -0.25 8.14 -51.93 -0.42 -0.68 16 44 H 0.17 -0.60 8.06 -52.49 -0.42 -1.02 16 45 H 0.15 -0.15 8.06 -52.49 -0.42 -0.57 16 46 H 0.18 -0.14 8.06 -52.49 -0.42 -0.56 16 47 H 0.09 -0.54 8.08 -51.93 -0.42 -0.96 16 48 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 49 H 0.13 -0.42 6.29 -52.49 -0.33 -0.75 16 50 H 0.14 -0.25 6.29 -52.49 -0.33 -0.58 16 LS Contribution 416.71 15.07 6.28 6.28 Total: 0.00 -11.50 416.71 -10.16 -21.66 By element: Atomic # 1 Polarization: -7.28 SS G_CDS: -7.09 Total: -14.37 kcal Atomic # 6 Polarization: -0.21 SS G_CDS: -2.83 Total: -3.04 kcal Atomic # 7 Polarization: 0.91 SS G_CDS: -0.13 Total: 0.78 kcal Atomic # 8 Polarization: -6.22 SS G_CDS: -1.22 Total: -7.44 kcal Atomic # 14 Polarization: 1.30 SS G_CDS: -5.17 Total: -3.87 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -11.50 -10.16 -21.66 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.099 kcal (2) G-P(sol) polarization free energy of solvation -11.500 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.598 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.161 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.661 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.438 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds