Wall clock time and date at job start Sun Mar 7 2021 02:37:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35900 * 117.00179 * 2 1 4 4 C 1.38611 * 120.02942 * 179.97438 * 3 2 1 5 5 C 1.38657 * 119.89001 * 180.02562 * 4 3 2 6 6 O 1.35897 * 120.02084 * 179.97438 * 5 4 3 7 7 C 1.42898 * 117.00481 * 359.97438 * 6 5 4 8 8 C 1.50703 * 109.47171 * 180.02562 * 7 6 5 9 9 O 1.21278 * 119.99985 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00161 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00271 * 180.02562 * 10 8 7 12 12 H 1.09003 * 112.84993 * 336.19005 * 11 10 8 13 13 C 1.53781 * 113.61614 * 107.49783 * 11 10 8 14 14 C 1.53782 * 87.07914 * 139.98041 * 13 11 10 15 15 H 1.09004 * 113.68734 * 89.12836 * 14 13 11 16 16 C 1.52999 * 113.61547 * 220.01706 * 14 13 11 17 17 N 1.46498 * 109.47268 * 272.50230 * 16 14 13 18 18 C 1.34953 * 126.03880 * 124.71499 * 17 16 14 19 19 C 1.35312 * 107.74214 * 179.83704 * 18 17 16 20 20 C 1.39867 * 107.92581 * 0.42328 * 19 18 17 21 21 N 1.30839 * 108.19973 * 359.73676 * 20 19 18 22 22 C 1.53780 * 87.08354 * 334.56761 * 14 13 11 23 23 C 1.38744 * 119.94737 * 0.25432 * 5 4 3 24 24 C 1.50701 * 119.97212 * 179.74892 * 23 5 4 25 25 O 1.42894 * 109.47079 * 284.99343 * 24 23 5 26 26 Si 1.86305 * 109.47176 * 164.99691 * 24 23 5 27 27 C 1.38203 * 120.05479 * 359.48782 * 23 5 4 28 28 C 1.38152 * 120.10619 * 0.51495 * 27 23 5 29 29 H 1.08989 * 109.47494 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47298 * 300.00719 * 1 2 3 31 31 H 1.09004 * 109.46866 * 59.99997 * 1 2 3 32 32 H 1.07997 * 120.04977 * 0.04130 * 4 3 2 33 33 H 1.09002 * 109.47259 * 300.00417 * 7 6 5 34 34 H 1.09001 * 109.47074 * 60.00439 * 7 6 5 35 35 H 0.97005 * 119.99463 * 359.97438 * 10 8 7 36 36 H 1.09000 * 113.61499 * 254.52652 * 13 11 10 37 37 H 1.09000 * 113.61078 * 25.43522 * 13 11 10 38 38 H 1.09005 * 109.46952 * 32.49918 * 16 14 13 39 39 H 1.09002 * 109.47409 * 152.49874 * 16 14 13 40 40 H 1.08000 * 126.12591 * 359.97438 * 18 17 16 41 41 H 1.08008 * 126.03444 * 180.15710 * 19 18 17 42 42 H 1.08001 * 125.90024 * 179.75758 * 20 19 18 43 43 H 1.09002 * 113.61383 * 270.88322 * 22 14 13 44 44 H 1.09002 * 113.68732 * 139.98791 * 22 14 13 45 45 H 1.08993 * 109.47056 * 45.00067 * 24 23 5 46 46 H 0.96696 * 114.00265 * 300.00400 * 25 24 23 47 47 H 1.48504 * 109.99633 * 58.67621 * 26 24 23 48 48 H 1.48491 * 110.00230 * 179.97438 * 26 24 23 49 49 H 1.07994 * 119.94570 * 180.25352 * 27 23 5 50 50 H 1.07998 * 119.97439 * 179.72135 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4302 1.2841 0.0005 5 6 4.0567 2.5210 0.0011 6 8 5.4136 2.5959 0.0021 7 6 6.1316 1.3604 0.0032 8 6 7.6125 1.6400 0.0049 9 8 8.0135 2.7846 0.0047 10 7 8.4913 0.6181 0.0056 11 6 9.9308 0.8899 0.0078 12 1 10.1768 1.8716 -0.3968 13 6 10.6128 0.5871 1.3525 14 6 11.7865 0.0165 0.5390 15 1 12.5418 0.7587 0.2802 16 6 12.3861 -1.2570 1.1388 17 7 13.4196 -0.8983 2.1131 18 6 13.4651 -1.2912 3.4033 19 6 14.5737 -0.7510 3.9601 20 6 15.2231 0.0056 2.9792 21 7 14.5321 -0.0820 1.8716 22 6 10.7739 -0.2505 -0.5870 23 6 3.2972 3.6821 0.0064 24 6 3.9776 5.0268 0.0127 25 8 4.5035 5.2884 1.3153 26 14 2.7441 6.3490 -0.4360 27 6 1.9173 3.6066 0.0005 28 6 1.2907 2.3753 0.0000 29 1 -0.3634 -1.0275 -0.0005 30 1 -0.3634 0.5139 0.8899 31 1 -0.3633 0.5139 -0.8900 32 1 4.0196 0.3791 0.0003 33 1 5.8692 0.7884 0.8932 34 1 5.8707 0.7878 -0.8868 35 1 8.1705 -0.2974 0.0054 36 1 10.8698 1.4799 1.9225 37 1 10.0901 -0.1610 1.9484 38 1 11.6020 -1.8290 1.6349 39 1 12.8283 -1.8592 0.3450 40 1 12.7466 -1.9252 3.9015 41 1 14.8975 -0.8778 4.9827 42 1 16.1371 0.5651 3.1129 43 1 10.2952 -1.2275 -0.5212 44 1 11.1597 -0.0343 -1.5833 45 1 4.7900 5.0263 -0.7139 46 1 3.8349 5.3036 2.0137 47 1 1.6152 6.3388 0.5288 48 1 3.4025 7.6800 -0.4327 49 1 1.3278 4.5115 0.0005 50 1 0.2122 2.3188 -0.0001 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_4974312.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:37:10 Heat of formation + Delta-G solvation = 8.033741 kcal Electronic energy + Delta-G solvation = -32974.092398 eV Core-core repulsion = 28358.278471 eV Total energy + Delta-G solvation = -4615.813927 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.07379 -41.82355 -41.15551 -40.17282 -39.33916 -38.19704 -36.91817 -35.20356 -33.60925 -32.29928 -31.45963 -30.95985 -29.72617 -28.56274 -28.22302 -26.91438 -26.07960 -24.55755 -23.40675 -22.47863 -22.04870 -21.78466 -21.53457 -20.55265 -19.98323 -18.60574 -18.30272 -17.99710 -17.85695 -17.52528 -17.28942 -17.07045 -16.77830 -16.45637 -16.35902 -16.19225 -15.91645 -15.63726 -15.30005 -15.16570 -15.12728 -14.65015 -14.54368 -14.48446 -14.21261 -13.75287 -13.68958 -13.67296 -13.55195 -13.42708 -13.40852 -13.15360 -12.98956 -12.58123 -12.38709 -12.28561 -11.98832 -11.97548 -11.70708 -11.60651 -11.54085 -11.48187 -10.86285 -10.38009 -10.28466 -10.16494 -9.71127 -9.45323 -9.09245 -4.89185 0.19941 0.32071 1.02442 1.38973 1.40824 1.47637 1.59812 1.62580 2.01806 2.04832 2.13345 2.53189 2.57610 3.22801 3.32830 3.38792 3.47582 3.57726 3.62240 3.66997 3.77114 3.82055 3.85357 3.90692 3.95097 3.99693 4.01931 4.03142 4.12393 4.23117 4.24384 4.34902 4.36059 4.39604 4.43545 4.50384 4.56711 4.60022 4.74545 4.76132 4.82962 4.88873 4.92415 5.03017 5.11188 5.16711 5.21721 5.27211 5.39142 5.44908 5.79133 6.09468 6.11632 6.27723 6.36331 6.62698 6.83858 7.09141 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.247 4.247 5 C 0.193 3.807 6 O -0.272 6.272 7 C 0.037 3.963 8 C 0.516 3.484 9 O -0.506 6.506 10 N -0.719 5.719 11 C 0.128 3.872 12 H 0.120 0.880 13 C -0.147 4.147 14 C -0.120 4.120 15 H 0.111 0.889 16 C 0.146 3.854 17 N -0.371 5.371 18 C 0.052 3.948 19 C -0.275 4.275 20 C 0.044 3.956 21 N -0.295 5.295 22 C -0.136 4.136 23 C -0.181 4.181 24 C -0.060 4.060 25 O -0.521 6.521 26 Si 0.686 3.314 27 C -0.042 4.042 28 C -0.239 4.239 29 H 0.103 0.897 30 H 0.058 0.942 31 H 0.060 0.940 32 H 0.138 0.862 33 H 0.095 0.905 34 H 0.097 0.903 35 H 0.402 0.598 36 H 0.075 0.925 37 H 0.086 0.914 38 H 0.096 0.904 39 H 0.088 0.912 40 H 0.172 0.828 41 H 0.147 0.853 42 H 0.183 0.817 43 H 0.091 0.909 44 H 0.084 0.916 45 H 0.118 0.882 46 H 0.369 0.631 47 H -0.261 1.261 48 H -0.257 1.257 49 H 0.138 0.862 50 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.243 -7.215 -1.041 8.979 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.267 4.267 5 C 0.146 3.854 6 O -0.183 6.183 7 C -0.042 4.042 8 C 0.301 3.699 9 O -0.379 6.379 10 N -0.372 5.372 11 C 0.023 3.977 12 H 0.137 0.863 13 C -0.186 4.186 14 C -0.140 4.140 15 H 0.129 0.871 16 C 0.025 3.975 17 N -0.154 5.154 18 C -0.095 4.095 19 C -0.304 4.304 20 C -0.142 4.142 21 N -0.116 5.116 22 C -0.175 4.175 23 C -0.183 4.183 24 C -0.169 4.169 25 O -0.326 6.326 26 Si 0.588 3.412 27 C -0.060 4.060 28 C -0.258 4.258 29 H 0.121 0.879 30 H 0.077 0.923 31 H 0.078 0.922 32 H 0.156 0.844 33 H 0.113 0.887 34 H 0.114 0.886 35 H 0.237 0.763 36 H 0.094 0.906 37 H 0.105 0.895 38 H 0.114 0.886 39 H 0.106 0.894 40 H 0.189 0.811 41 H 0.165 0.835 42 H 0.200 0.800 43 H 0.109 0.891 44 H 0.102 0.898 45 H 0.135 0.865 46 H 0.216 0.784 47 H -0.186 1.186 48 H -0.182 1.182 49 H 0.156 0.844 50 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -4.795 -5.310 -2.457 7.565 hybrid contribution -0.350 -1.310 2.210 2.593 sum -5.145 -6.620 -0.248 8.388 Atomic orbital electron populations 1.23147 0.77588 1.04424 1.01791 1.86073 1.22031 1.26683 1.88004 1.18692 0.91456 0.84387 0.92645 1.20386 0.92924 0.97316 1.16052 1.18400 0.81978 0.92430 0.92608 1.86267 1.14732 1.29579 1.87713 1.22529 0.90332 0.87155 1.04200 1.20055 0.87366 0.85753 0.76736 1.90809 1.79702 1.20844 1.46554 1.45793 1.06128 1.09029 1.76264 1.22490 0.77868 1.00429 0.96898 0.86259 1.23574 0.95892 1.01988 0.97113 1.22707 0.96582 0.97807 0.96897 0.87124 1.21728 0.87835 0.96771 0.91203 1.48705 1.19831 1.38300 1.08530 1.22576 1.00215 1.01117 0.85543 1.21559 0.98977 1.07992 1.01884 1.23935 1.00070 0.99495 0.90663 1.77342 0.97400 1.13201 1.23702 1.23378 0.96083 0.98938 0.99123 1.19512 0.92733 0.94387 1.11627 1.24820 1.05968 0.97820 0.88338 1.86702 1.36921 1.92877 1.16123 0.95211 0.77602 0.78150 0.90240 1.20782 0.92687 0.97888 0.94659 1.21122 1.00446 0.91769 1.12455 0.87874 0.92301 0.92150 0.84433 0.88707 0.88561 0.76312 0.90648 0.89533 0.88566 0.89412 0.81113 0.83543 0.80028 0.89059 0.89772 0.86455 0.78407 1.18628 1.18183 0.84429 0.84771 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 9.81 101.05 0.99 0.93 16 2 O -0.32 -0.23 10.49 -19.43 -0.20 -0.43 16 3 C 0.17 0.19 6.68 -39.24 -0.26 -0.07 16 4 C -0.25 -0.26 8.97 -39.29 -0.35 -0.61 16 5 C 0.19 0.45 6.66 -39.24 -0.26 0.19 16 6 O -0.27 -0.92 8.99 -39.32 -0.35 -1.27 16 7 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 8 C 0.52 0.86 7.91 -10.98 -0.09 0.77 16 9 O -0.51 -3.54 16.10 -14.35 -0.23 -3.77 16 10 N -0.72 1.34 5.35 -53.02 -0.28 1.06 16 11 C 0.13 -0.14 4.24 -67.12 -0.28 -0.42 16 12 H 0.12 0.16 7.46 -51.93 -0.39 -0.22 16 13 C -0.15 0.18 7.43 -25.92 -0.19 -0.02 16 14 C -0.12 0.21 3.87 -89.81 -0.35 -0.14 16 15 H 0.11 0.06 7.96 -51.93 -0.41 -0.35 16 16 C 0.15 -0.29 6.35 -4.04 -0.03 -0.32 16 17 N -0.37 -0.45 3.68 -61.36 -0.23 -0.67 16 18 C 0.05 0.02 11.45 -17.22 -0.20 -0.18 16 19 C -0.27 -0.32 10.80 -40.02 -0.43 -0.75 16 20 C 0.04 0.10 12.03 -17.37 -0.21 -0.11 16 21 N -0.29 -1.08 12.27 30.62 0.38 -0.71 16 22 C -0.14 0.46 7.39 -25.92 -0.19 0.27 16 23 C -0.18 -0.33 5.28 -104.45 -0.55 -0.88 16 24 C -0.06 -0.14 2.37 36.01 0.09 -0.05 16 25 O -0.52 -2.14 12.88 -35.23 -0.45 -2.59 16 26 Si 0.69 0.19 30.23 -169.99 -5.14 -4.95 16 27 C -0.04 -0.01 8.65 -39.63 -0.34 -0.35 16 28 C -0.24 -0.01 9.04 -39.41 -0.36 -0.37 16 29 H 0.10 -0.42 8.14 -51.94 -0.42 -0.84 16 30 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 31 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 32 H 0.14 -0.13 6.30 -52.49 -0.33 -0.46 16 33 H 0.10 -0.25 7.66 -51.93 -0.40 -0.65 16 34 H 0.10 -0.30 7.66 -51.93 -0.40 -0.70 16 35 H 0.40 -2.13 8.73 -40.82 -0.36 -2.49 16 36 H 0.07 0.09 8.14 -51.93 -0.42 -0.34 16 37 H 0.09 -0.21 7.90 -51.93 -0.41 -0.62 16 38 H 0.10 -0.43 7.77 -51.93 -0.40 -0.84 16 39 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 40 H 0.17 -0.52 8.06 -52.49 -0.42 -0.94 16 41 H 0.15 -0.09 8.06 -52.48 -0.42 -0.51 16 42 H 0.18 -0.06 8.06 -52.49 -0.42 -0.49 16 43 H 0.09 -0.49 8.08 -51.93 -0.42 -0.91 16 44 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 45 H 0.12 0.37 7.82 -51.93 -0.41 -0.03 16 46 H 0.37 0.23 8.70 45.56 0.40 0.62 16 47 H -0.26 -0.32 6.69 56.52 0.38 0.06 16 48 H -0.26 -0.97 7.11 56.52 0.40 -0.57 16 49 H 0.14 -0.19 4.85 -52.49 -0.25 -0.45 16 50 H 0.13 -0.28 6.29 -52.49 -0.33 -0.61 16 LS Contribution 417.18 15.07 6.29 6.29 Total: 0.00 -12.70 417.18 -10.14 -22.85 By element: Atomic # 1 Polarization: -6.76 SS G_CDS: -7.09 Total: -13.84 kcal Atomic # 6 Polarization: 0.86 SS G_CDS: -2.83 Total: -1.96 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -0.13 Total: -0.32 kcal Atomic # 8 Polarization: -6.82 SS G_CDS: -1.24 Total: -8.06 kcal Atomic # 14 Polarization: 0.19 SS G_CDS: -5.14 Total: -4.95 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -12.70 -10.14 -22.85 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_4974312.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.882 kcal (2) G-P(sol) polarization free energy of solvation -12.704 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.177 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.144 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.848 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.034 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds