Wall clock time and date at job start Sun Mar 7 2021 02:37:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35900 * 117.00179 * 2 1 4 4 C 1.38611 * 120.02942 * 179.97438 * 3 2 1 5 5 C 1.38657 * 119.89001 * 180.02562 * 4 3 2 6 6 O 1.35897 * 120.02084 * 179.97438 * 5 4 3 7 7 C 1.42898 * 117.00481 * 359.97438 * 6 5 4 8 8 C 1.50703 * 109.47171 * 180.02562 * 7 6 5 9 9 O 1.21278 * 119.99985 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00161 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00271 * 180.02562 * 10 8 7 12 12 H 1.09003 * 112.84993 * 336.19005 * 11 10 8 13 13 C 1.53781 * 113.61614 * 107.49783 * 11 10 8 14 14 C 1.53782 * 87.07914 * 139.98041 * 13 11 10 15 15 H 1.09004 * 113.68734 * 89.12836 * 14 13 11 16 16 C 1.52999 * 113.61547 * 220.01706 * 14 13 11 17 17 N 1.46498 * 109.47268 * 272.50230 * 16 14 13 18 18 C 1.34953 * 126.03880 * 124.71499 * 17 16 14 19 19 C 1.35312 * 107.74214 * 179.83704 * 18 17 16 20 20 C 1.39867 * 107.92581 * 0.42328 * 19 18 17 21 21 N 1.30839 * 108.19973 * 359.73676 * 20 19 18 22 22 C 1.53780 * 87.08354 * 334.56761 * 14 13 11 23 23 C 1.38744 * 119.94737 * 0.25432 * 5 4 3 24 24 C 1.50701 * 119.97212 * 179.74892 * 23 5 4 25 25 O 1.42894 * 109.47079 * 284.99343 * 24 23 5 26 26 Si 1.86305 * 109.47176 * 164.99691 * 24 23 5 27 27 C 1.38203 * 120.05479 * 359.48782 * 23 5 4 28 28 C 1.38152 * 120.10619 * 0.51495 * 27 23 5 29 29 H 1.08989 * 109.47494 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47298 * 300.00719 * 1 2 3 31 31 H 1.09004 * 109.46866 * 59.99997 * 1 2 3 32 32 H 1.07997 * 120.04977 * 0.04130 * 4 3 2 33 33 H 1.09002 * 109.47259 * 300.00417 * 7 6 5 34 34 H 1.09001 * 109.47074 * 60.00439 * 7 6 5 35 35 H 0.97005 * 119.99463 * 359.97438 * 10 8 7 36 36 H 1.09000 * 113.61499 * 254.52652 * 13 11 10 37 37 H 1.09000 * 113.61078 * 25.43522 * 13 11 10 38 38 H 1.09005 * 109.46952 * 32.49918 * 16 14 13 39 39 H 1.09002 * 109.47409 * 152.49874 * 16 14 13 40 40 H 1.08000 * 126.12591 * 359.97438 * 18 17 16 41 41 H 1.08008 * 126.03444 * 180.15710 * 19 18 17 42 42 H 1.08001 * 125.90024 * 179.75758 * 20 19 18 43 43 H 1.09002 * 113.61383 * 270.88322 * 22 14 13 44 44 H 1.09002 * 113.68732 * 139.98791 * 22 14 13 45 45 H 1.08993 * 109.47056 * 45.00067 * 24 23 5 46 46 H 0.96696 * 114.00265 * 300.00400 * 25 24 23 47 47 H 1.48504 * 109.99633 * 58.67621 * 26 24 23 48 48 H 1.48491 * 110.00230 * 179.97438 * 26 24 23 49 49 H 1.07994 * 119.94570 * 180.25352 * 27 23 5 50 50 H 1.07998 * 119.97439 * 179.72135 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4302 1.2841 0.0005 5 6 4.0567 2.5210 0.0011 6 8 5.4136 2.5959 0.0021 7 6 6.1316 1.3604 0.0032 8 6 7.6125 1.6400 0.0049 9 8 8.0135 2.7846 0.0047 10 7 8.4913 0.6181 0.0056 11 6 9.9308 0.8899 0.0078 12 1 10.1768 1.8716 -0.3968 13 6 10.6128 0.5871 1.3525 14 6 11.7865 0.0165 0.5390 15 1 12.5418 0.7587 0.2802 16 6 12.3861 -1.2570 1.1388 17 7 13.4196 -0.8983 2.1131 18 6 13.4651 -1.2912 3.4033 19 6 14.5737 -0.7510 3.9601 20 6 15.2231 0.0056 2.9792 21 7 14.5321 -0.0820 1.8716 22 6 10.7739 -0.2505 -0.5870 23 6 3.2972 3.6821 0.0064 24 6 3.9776 5.0268 0.0127 25 8 4.5035 5.2884 1.3153 26 14 2.7441 6.3490 -0.4360 27 6 1.9173 3.6066 0.0005 28 6 1.2907 2.3753 0.0000 29 1 -0.3634 -1.0275 -0.0005 30 1 -0.3634 0.5139 0.8899 31 1 -0.3633 0.5139 -0.8900 32 1 4.0196 0.3791 0.0003 33 1 5.8692 0.7884 0.8932 34 1 5.8707 0.7878 -0.8868 35 1 8.1705 -0.2974 0.0054 36 1 10.8698 1.4799 1.9225 37 1 10.0901 -0.1610 1.9484 38 1 11.6020 -1.8290 1.6349 39 1 12.8283 -1.8592 0.3450 40 1 12.7466 -1.9252 3.9015 41 1 14.8975 -0.8778 4.9827 42 1 16.1371 0.5651 3.1129 43 1 10.2952 -1.2275 -0.5212 44 1 11.1597 -0.0343 -1.5833 45 1 4.7900 5.0263 -0.7139 46 1 3.8349 5.3036 2.0137 47 1 1.6152 6.3388 0.5288 48 1 3.4025 7.6800 -0.4327 49 1 1.3278 4.5115 0.0005 50 1 0.2122 2.3188 -0.0001 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688084_4974312.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:37:09 Heat of formation + Delta-G solvation = 4.386467 kcal Electronic energy + Delta-G solvation = -32974.250556 eV Core-core repulsion = 28358.278471 eV Total energy + Delta-G solvation = -4615.972085 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.08722 -41.85024 -41.17873 -40.14285 -39.39413 -38.33412 -37.02057 -35.25399 -33.62154 -32.31563 -31.46058 -30.99695 -29.73897 -28.41304 -28.15536 -26.78228 -26.14398 -24.54201 -23.39882 -22.50724 -22.05565 -21.84188 -21.54513 -20.48153 -19.97523 -18.64284 -18.31140 -18.09720 -17.87049 -17.54593 -17.26936 -17.04430 -16.67665 -16.50275 -16.32453 -16.19715 -16.01734 -15.67454 -15.41285 -15.18756 -15.14946 -14.71319 -14.52479 -14.51017 -14.21003 -13.77529 -13.68647 -13.53015 -13.48348 -13.35641 -13.34748 -13.15686 -12.90547 -12.48667 -12.35725 -12.31090 -12.03580 -11.90356 -11.66643 -11.64078 -11.57691 -11.49039 -11.02871 -10.53017 -10.34501 -10.18260 -9.71017 -9.48471 -9.11439 -4.94493 0.19172 0.29768 0.99800 1.30271 1.37847 1.43001 1.54206 1.67812 1.94658 1.95193 2.24423 2.54952 2.57662 3.34282 3.45887 3.46518 3.48236 3.56469 3.70897 3.72420 3.79341 3.90302 3.93356 4.03620 4.05841 4.08061 4.16174 4.17119 4.31497 4.34179 4.39886 4.42610 4.46034 4.49648 4.58792 4.64671 4.64885 4.73553 4.78239 4.79395 4.89143 4.93923 5.00125 5.01281 5.14219 5.16550 5.22642 5.26974 5.45083 5.49014 5.74311 6.12342 6.19385 6.35079 6.43505 6.55847 6.77571 7.09720 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.329 6.329 3 C 0.165 3.835 4 C -0.251 4.251 5 C 0.177 3.823 6 O -0.305 6.305 7 C 0.035 3.965 8 C 0.512 3.488 9 O -0.573 6.573 10 N -0.696 5.696 11 C 0.118 3.882 12 H 0.084 0.916 13 C -0.141 4.141 14 C -0.117 4.117 15 H 0.078 0.922 16 C 0.140 3.860 17 N -0.375 5.375 18 C 0.055 3.945 19 C -0.295 4.295 20 C 0.027 3.973 21 N -0.339 5.339 22 C -0.114 4.114 23 C -0.196 4.196 24 C -0.078 4.078 25 O -0.550 6.550 26 Si 0.781 3.219 27 C -0.041 4.041 28 C -0.238 4.238 29 H 0.117 0.883 30 H 0.066 0.934 31 H 0.070 0.930 32 H 0.155 0.845 33 H 0.121 0.879 34 H 0.127 0.873 35 H 0.424 0.576 36 H 0.042 0.958 37 H 0.110 0.890 38 H 0.132 0.868 39 H 0.094 0.906 40 H 0.208 0.792 41 H 0.160 0.840 42 H 0.194 0.806 43 H 0.127 0.873 44 H 0.082 0.918 45 H 0.096 0.904 46 H 0.381 0.619 47 H -0.262 1.262 48 H -0.309 1.309 49 H 0.155 0.845 50 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.787 -10.189 -0.913 12.856 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.242 6.242 3 C 0.119 3.881 4 C -0.270 4.270 5 C 0.130 3.870 6 O -0.217 6.217 7 C -0.043 4.043 8 C 0.298 3.702 9 O -0.451 6.451 10 N -0.350 5.350 11 C 0.013 3.987 12 H 0.102 0.898 13 C -0.180 4.180 14 C -0.136 4.136 15 H 0.097 0.903 16 C 0.020 3.980 17 N -0.158 5.158 18 C -0.092 4.092 19 C -0.324 4.324 20 C -0.158 4.158 21 N -0.162 5.162 22 C -0.152 4.152 23 C -0.197 4.197 24 C -0.186 4.186 25 O -0.358 6.358 26 Si 0.685 3.315 27 C -0.059 4.059 28 C -0.256 4.256 29 H 0.135 0.865 30 H 0.085 0.915 31 H 0.089 0.911 32 H 0.173 0.827 33 H 0.139 0.861 34 H 0.144 0.856 35 H 0.263 0.737 36 H 0.061 0.939 37 H 0.129 0.871 38 H 0.150 0.850 39 H 0.113 0.887 40 H 0.224 0.776 41 H 0.177 0.823 42 H 0.211 0.789 43 H 0.145 0.855 44 H 0.101 0.899 45 H 0.114 0.886 46 H 0.230 0.770 47 H -0.187 1.187 48 H -0.238 1.238 49 H 0.173 0.827 50 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -7.346 -8.381 -2.333 11.387 hybrid contribution 0.471 -0.428 2.191 2.281 sum -6.875 -8.809 -0.142 11.175 Atomic orbital electron populations 1.23405 0.76002 1.05733 1.02678 1.86054 1.23744 1.26522 1.87915 1.18868 0.91661 0.84962 0.92633 1.20553 0.93391 0.97387 1.15653 1.18585 0.81692 0.93210 0.93491 1.86227 1.15571 1.31778 1.88125 1.22762 0.88276 0.86473 1.06765 1.20585 0.88705 0.85295 0.75566 1.90784 1.80813 1.23543 1.49953 1.45621 1.05403 1.09511 1.74435 1.22410 0.78578 1.00082 0.97610 0.89786 1.23563 0.96359 1.01288 0.96787 1.22530 0.95905 0.97546 0.97650 0.90333 1.22036 0.88031 0.96493 0.91417 1.48980 1.19630 1.37693 1.09467 1.23188 1.00337 1.00531 0.85145 1.21873 0.99637 1.08413 1.02506 1.24308 1.00668 0.99880 0.90902 1.77268 0.99000 1.15029 1.24902 1.23315 0.94361 0.99333 0.98197 1.19600 0.93541 0.93937 1.12664 1.25160 1.06259 0.99926 0.87242 1.86652 1.38574 1.93189 1.17362 0.94125 0.75471 0.73280 0.88601 1.20939 0.91975 0.98838 0.94112 1.21402 1.01625 0.91245 1.11364 0.86495 0.91509 0.91121 0.82728 0.86137 0.85570 0.73743 0.93931 0.87133 0.84988 0.88744 0.77551 0.82250 0.78926 0.85512 0.89913 0.88576 0.77020 1.18736 1.23780 0.82741 0.82518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 0.02 10.49 -92.43 -0.97 -0.95 16 3 C 0.17 0.17 6.68 22.49 0.15 0.32 16 4 C -0.25 -0.38 8.97 22.46 0.20 -0.17 16 5 C 0.18 0.95 6.66 22.49 0.15 1.10 16 6 O -0.30 -2.57 8.99 -73.35 -0.66 -3.23 16 7 C 0.04 -0.03 5.22 71.24 0.37 0.34 16 8 C 0.51 2.38 7.91 87.66 0.69 3.07 16 9 O -0.57 -10.04 16.10 16.01 0.26 -9.78 16 10 N -0.70 2.72 5.35 -440.04 -2.36 0.36 16 11 C 0.12 -0.13 4.24 45.52 0.19 0.06 16 12 H 0.08 0.55 7.46 -2.39 -0.02 0.53 16 13 C -0.14 0.24 7.43 31.12 0.23 0.47 16 14 C -0.12 0.34 3.87 -10.27 -0.04 0.30 16 15 H 0.08 0.31 7.96 -2.38 -0.02 0.29 16 16 C 0.14 -0.74 6.35 86.38 0.55 -0.19 16 17 N -0.38 -0.89 3.68 -348.06 -1.28 -2.17 16 18 C 0.05 -0.02 11.45 83.54 0.96 0.94 16 19 C -0.30 -0.78 10.80 21.99 0.24 -0.54 16 20 C 0.03 0.16 12.03 85.24 1.02 1.19 16 21 N -0.34 -3.04 12.27 -57.02 -0.70 -3.74 16 22 C -0.11 0.86 7.39 31.12 0.23 1.09 16 23 C -0.20 -0.87 5.28 -19.75 -0.10 -0.97 16 24 C -0.08 -0.51 2.37 71.24 0.17 -0.34 16 25 O -0.55 -5.83 12.88 -148.98 -1.92 -7.74 16 26 Si 0.78 0.82 30.23 68.60 2.07 2.89 16 27 C -0.04 0.01 8.65 22.24 0.19 0.20 16 28 C -0.24 0.31 9.04 22.38 0.20 0.52 16 29 H 0.12 -1.18 8.14 -2.39 -0.02 -1.20 16 30 H 0.07 -0.57 7.66 -2.39 -0.02 -0.59 16 31 H 0.07 -0.64 7.66 -2.39 -0.02 -0.66 16 32 H 0.16 -0.52 6.30 -2.91 -0.02 -0.53 16 33 H 0.12 -0.78 7.66 -2.39 -0.02 -0.80 16 34 H 0.13 -0.93 7.66 -2.39 -0.02 -0.95 16 35 H 0.42 -5.41 8.73 -92.70 -0.81 -6.22 16 36 H 0.04 0.22 8.14 -2.39 -0.02 0.20 16 37 H 0.11 -0.73 7.90 -2.39 -0.02 -0.75 16 38 H 0.13 -1.65 7.77 -2.38 -0.02 -1.67 16 39 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 40 H 0.21 -1.80 8.06 -2.91 -0.02 -1.83 16 41 H 0.16 -0.19 8.06 -2.91 -0.02 -0.21 16 42 H 0.19 0.25 8.06 -2.91 -0.02 0.22 16 43 H 0.13 -1.80 8.08 -2.39 -0.02 -1.82 16 44 H 0.08 -0.53 8.14 -2.39 -0.02 -0.55 16 45 H 0.10 0.94 7.82 -2.39 -0.02 0.93 16 46 H 0.38 1.12 8.70 -74.06 -0.64 0.48 16 47 H -0.26 -0.29 6.69 99.48 0.67 0.37 16 48 H -0.31 -2.99 7.11 99.48 0.71 -2.28 16 49 H 0.16 -0.67 4.85 -2.91 -0.01 -0.69 16 50 H 0.16 -1.02 6.29 -2.91 -0.02 -1.04 16 Total: 0.00 -35.83 417.18 0.50 -35.33 By element: Atomic # 1 Polarization: -18.90 SS G_CDS: -0.46 Total: -19.37 kcal Atomic # 6 Polarization: 1.88 SS G_CDS: 6.52 Total: 8.40 kcal Atomic # 7 Polarization: -1.22 SS G_CDS: -4.34 Total: -5.55 kcal Atomic # 8 Polarization: -18.41 SS G_CDS: -3.29 Total: -21.70 kcal Atomic # 14 Polarization: 0.82 SS G_CDS: 2.07 Total: 2.89 kcal Total: -35.83 0.50 -35.33 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_4974312.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.718 kcal (2) G-P(sol) polarization free energy of solvation -35.834 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.884 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.502 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.331 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.386 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds