Wall clock time and date at job start Sun Mar 7 2021 02:37:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35999 * 116.99372 * 2 1 4 4 C 1.39155 * 120.06889 * 180.02562 * 3 2 1 5 5 O 1.35992 * 120.07298 * 359.97438 * 4 3 2 6 6 C 1.42906 * 117.00187 * 179.72897 * 5 4 3 7 7 C 1.50695 * 109.47045 * 180.02562 * 6 5 4 8 8 O 1.21274 * 120.00413 * 0.27121 * 7 6 5 9 9 N 1.34784 * 119.99635 * 180.02562 * 7 6 5 10 10 C 1.46499 * 119.99971 * 179.97438 * 9 7 6 11 11 H 1.09006 * 112.84822 * 23.79911 * 10 9 7 12 12 C 1.53775 * 113.61462 * 154.99913 * 10 9 7 13 13 C 1.53780 * 87.08390 * 139.98289 * 12 10 9 14 14 H 1.09003 * 113.61528 * 89.11243 * 13 12 10 15 15 C 1.52992 * 113.62018 * 220.02217 * 13 12 10 16 16 N 1.46498 * 109.47866 * 184.99949 * 15 13 12 17 17 C 1.34945 * 126.04151 * 124.71270 * 16 15 13 18 18 C 1.35318 * 107.74491 * 179.84283 * 17 16 15 19 19 C 1.39866 * 107.91883 * 0.42115 * 18 17 16 20 20 N 1.30836 * 108.20656 * 359.73991 * 19 18 17 21 21 C 1.53784 * 113.61488 * 252.49901 * 10 9 7 22 22 C 1.38565 * 119.85357 * 179.72710 * 4 3 2 23 23 C 1.38235 * 119.99920 * 0.27038 * 22 4 3 24 24 C 1.38257 * 120.14950 * 0.02562 * 23 22 4 25 25 C 1.50698 * 119.92760 * 180.02562 * 24 23 22 26 26 O 1.42909 * 109.46726 * 244.99732 * 25 24 23 27 27 Si 1.86290 * 109.47253 * 4.99695 * 25 24 23 28 28 C 1.38242 * 120.14103 * 359.97438 * 24 23 22 29 29 H 1.09007 * 109.47308 * 60.00400 * 1 2 3 30 30 H 1.09004 * 109.46869 * 179.97438 * 1 2 3 31 31 H 1.09004 * 109.47612 * 300.00098 * 1 2 3 32 32 H 1.09005 * 109.47002 * 60.00042 * 6 5 4 33 33 H 1.09002 * 109.46834 * 300.00409 * 6 5 4 34 34 H 0.96999 * 120.00044 * 0.02562 * 9 7 6 35 35 H 1.09005 * 113.61447 * 254.53082 * 12 10 9 36 36 H 1.08991 * 113.61578 * 25.43347 * 12 10 9 37 37 H 1.09005 * 109.46868 * 305.00163 * 15 13 12 38 38 H 1.09004 * 109.47597 * 64.99227 * 15 13 12 39 39 H 1.08004 * 126.12684 * 359.97438 * 17 16 15 40 40 H 1.07994 * 126.03817 * 180.16186 * 18 17 16 41 41 H 1.08006 * 125.89569 * 179.76192 * 19 18 17 42 42 H 1.08996 * 113.60949 * 334.56614 * 21 10 9 43 43 H 1.09001 * 113.61595 * 105.46866 * 21 10 9 44 44 H 1.08004 * 119.99639 * 180.29258 * 22 4 3 45 45 H 1.08001 * 119.93054 * 179.97438 * 23 22 4 46 46 H 1.09004 * 109.46971 * 125.00254 * 25 24 23 47 47 H 0.96699 * 113.99715 * 179.97438 * 26 25 24 48 48 H 1.48509 * 109.99984 * 178.68155 * 27 25 24 49 49 H 1.48501 * 110.00264 * 300.00050 * 27 25 24 50 50 H 1.08006 * 119.99640 * 179.97438 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2118 0.0000 4 6 3.4358 1.2865 -0.0005 5 8 4.1794 0.1479 -0.0005 6 6 5.6003 0.3009 -0.0071 7 6 6.2518 -1.0580 -0.0067 8 8 5.5670 -2.0589 -0.0063 9 7 7.5957 -1.1609 -0.0119 10 6 8.2292 -2.4818 -0.0109 11 1 7.5818 -3.2620 -0.4116 12 6 9.6445 -2.4867 -0.6121 13 6 10.0342 -3.4595 0.5134 14 1 9.8808 -4.5078 0.2570 15 6 11.4180 -3.1878 1.1067 16 7 11.7455 -4.2319 2.0807 17 6 12.8452 -5.0138 2.0670 18 6 12.7751 -5.8430 3.1341 19 6 11.5872 -5.5646 3.8180 20 7 10.9691 -4.5990 3.1875 21 6 8.8830 -2.8506 1.3313 22 6 4.0601 2.5235 -0.0063 23 6 3.3028 3.6799 -0.0058 24 6 1.9222 3.6058 0.0010 25 6 1.1014 4.8697 0.0009 26 8 0.3702 4.9628 1.2252 27 14 2.2299 6.3430 -0.1620 28 6 1.2931 2.3749 0.0067 29 1 -0.3634 0.5138 -0.8901 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8900 32 1 5.9103 0.8532 0.8800 33 1 5.9026 0.8482 -0.9000 34 1 8.1434 -0.3604 -0.0154 35 1 9.6946 -2.9281 -1.6075 36 1 10.1487 -1.5224 -0.5497 37 1 12.1615 -3.1884 0.3096 38 1 11.4170 -2.2166 1.6016 39 1 13.6402 -4.9819 1.3366 40 1 13.5051 -6.5906 3.4068 41 1 11.2402 -6.0608 4.7124 42 1 9.1789 -1.9856 1.9249 43 1 8.3183 -3.5856 1.9048 44 1 5.1385 2.5841 -0.0115 45 1 3.7905 4.6435 -0.0098 46 1 0.4052 4.8507 -0.8376 47 1 -0.1813 5.7541 1.2947 48 1 1.4303 7.5940 -0.1953 49 1 3.1840 6.3802 0.9753 50 1 0.2145 2.3197 0.0124 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_60476.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:37:19 Heat of formation + Delta-G solvation = 10.647565 kcal Electronic energy + Delta-G solvation = -32603.851491 eV Core-core repulsion = 27988.150908 eV Total energy + Delta-G solvation = -4615.700583 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.05389 -41.73130 -41.09237 -39.83985 -38.94811 -38.68489 -37.08291 -35.16534 -33.59922 -32.10224 -31.42017 -30.94029 -29.80589 -28.48445 -28.18646 -26.83214 -26.15959 -24.39943 -23.33328 -22.36997 -21.91414 -21.73471 -21.45795 -20.73606 -19.66302 -18.61680 -18.42546 -18.16792 -18.10566 -17.48268 -17.41889 -17.10444 -16.55256 -16.50728 -16.10167 -15.86981 -15.75056 -15.62577 -15.50630 -15.26442 -14.99933 -14.85719 -14.35900 -14.04485 -14.03629 -13.97774 -13.66846 -13.61910 -13.49277 -13.46844 -13.44217 -13.03110 -12.76892 -12.56159 -12.28875 -12.18230 -12.12098 -11.94492 -11.88986 -11.66230 -11.58647 -11.40114 -10.80395 -10.53019 -10.28573 -10.09876 -9.72569 -9.46169 -8.79819 -5.00293 0.23010 0.35291 1.03014 1.24123 1.48380 1.53424 1.55867 1.61434 1.91524 2.02373 2.36521 2.56386 2.59412 3.19679 3.30822 3.32283 3.46997 3.58482 3.66281 3.70984 3.80854 3.85827 3.91548 3.95461 3.97197 3.98830 4.07442 4.18050 4.18331 4.25437 4.27496 4.32308 4.34350 4.45766 4.52389 4.59670 4.61283 4.67039 4.68287 4.74589 4.85306 4.92710 5.04041 5.07610 5.12778 5.14675 5.17144 5.44544 5.45065 5.59982 5.79781 6.01348 6.12009 6.36459 6.40179 6.59687 6.85199 7.15074 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.104 3.896 5 O -0.276 6.276 6 C 0.038 3.962 7 C 0.517 3.483 8 O -0.508 6.508 9 N -0.719 5.719 10 C 0.124 3.876 11 H 0.118 0.882 12 C -0.137 4.137 13 C -0.119 4.119 14 H 0.100 0.900 15 C 0.145 3.855 16 N -0.373 5.373 17 C 0.050 3.950 18 C -0.274 4.274 19 C 0.042 3.958 20 N -0.289 5.289 21 C -0.134 4.134 22 C -0.169 4.169 23 C -0.111 4.111 24 C -0.069 4.069 25 C -0.074 4.074 26 O -0.536 6.536 27 Si 0.685 3.315 28 C -0.145 4.145 29 H 0.056 0.944 30 H 0.103 0.897 31 H 0.056 0.944 32 H 0.094 0.906 33 H 0.095 0.905 34 H 0.402 0.598 35 H 0.082 0.918 36 H 0.091 0.909 37 H 0.098 0.902 38 H 0.086 0.914 39 H 0.172 0.828 40 H 0.147 0.853 41 H 0.182 0.818 42 H 0.087 0.913 43 H 0.078 0.922 44 H 0.140 0.860 45 H 0.133 0.867 46 H 0.076 0.924 47 H 0.380 0.620 48 H -0.261 1.261 49 H -0.255 1.255 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.856 4.637 -4.624 8.152 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.041 4.041 7 C 0.301 3.699 8 O -0.381 6.381 9 N -0.372 5.372 10 C 0.020 3.980 11 H 0.136 0.864 12 C -0.176 4.176 13 C -0.139 4.139 14 H 0.118 0.882 15 C 0.024 3.976 16 N -0.155 5.155 17 C -0.096 4.096 18 C -0.304 4.304 19 C -0.144 4.144 20 N -0.111 5.111 21 C -0.173 4.173 22 C -0.188 4.188 23 C -0.129 4.129 24 C -0.069 4.069 25 C -0.184 4.184 26 O -0.343 6.343 27 Si 0.586 3.414 28 C -0.164 4.164 29 H 0.074 0.926 30 H 0.121 0.879 31 H 0.075 0.925 32 H 0.112 0.888 33 H 0.113 0.887 34 H 0.237 0.763 35 H 0.100 0.900 36 H 0.110 0.890 37 H 0.116 0.884 38 H 0.104 0.896 39 H 0.190 0.810 40 H 0.164 0.836 41 H 0.199 0.801 42 H 0.105 0.895 43 H 0.097 0.903 44 H 0.158 0.842 45 H 0.150 0.850 46 H 0.094 0.906 47 H 0.227 0.773 48 H -0.187 1.187 49 H -0.179 1.179 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 3.859 4.548 -4.286 7.345 hybrid contribution -0.007 0.348 0.747 0.824 sum 3.852 4.896 -3.539 7.165 Atomic orbital electron populations 1.23128 0.78206 1.04375 1.01313 1.86250 1.21279 1.25318 1.88587 1.18242 0.89012 0.85493 1.01157 1.18269 0.88295 0.85766 1.01817 1.86280 1.16026 1.27723 1.88860 1.22494 0.81342 0.96299 1.03968 1.20070 0.82587 0.90549 0.76681 1.90797 1.62619 1.38044 1.46642 1.45787 1.05837 1.09302 1.76260 1.22547 0.92653 0.85484 0.97364 0.86404 1.23384 0.95342 1.00057 0.98787 1.22630 0.93669 1.00524 0.97041 0.88154 1.21729 0.97428 0.89118 0.89327 1.48730 1.16239 1.29065 1.21503 1.22606 0.92391 0.94009 1.00605 1.21559 1.02045 1.07187 0.99574 1.23955 0.94226 0.96000 1.00231 1.77403 1.18288 1.17158 0.98225 1.23458 0.96165 1.01156 0.96543 1.20956 1.00423 0.90586 1.06810 1.20663 0.92688 0.98050 1.01523 1.18922 0.92925 0.93131 1.01920 1.24784 1.00499 1.04039 0.89039 1.86604 1.62606 1.47348 1.37778 0.95025 0.81621 0.75337 0.89400 1.20910 1.00296 0.90447 1.04727 0.92571 0.87881 0.92541 0.88833 0.88698 0.76337 0.89951 0.89010 0.88354 0.89597 0.81039 0.83563 0.80096 0.89491 0.90326 0.84234 0.85003 0.90601 0.77258 1.18668 1.17924 0.84333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.02 9.81 101.05 0.99 1.01 16 2 O -0.30 -1.52 10.28 -34.24 -0.35 -1.87 16 3 C 0.11 0.45 6.70 -39.12 -0.26 0.19 16 4 C 0.10 0.36 6.70 -39.12 -0.26 0.10 16 5 O -0.28 -1.26 9.45 -47.34 -0.45 -1.71 16 6 C 0.04 -0.01 5.22 36.00 0.19 0.18 16 7 C 0.52 1.07 7.91 -10.98 -0.09 0.99 16 8 O -0.51 -3.81 16.10 -14.35 -0.23 -4.04 16 9 N -0.72 1.13 5.35 -53.02 -0.28 0.84 16 10 C 0.12 -0.11 4.24 -67.12 -0.28 -0.39 16 11 H 0.12 0.17 7.46 -51.93 -0.39 -0.21 16 12 C -0.14 0.49 7.39 -25.92 -0.19 0.30 16 13 C -0.12 0.23 3.83 -89.81 -0.34 -0.12 16 14 H 0.10 -0.05 8.14 -51.93 -0.42 -0.47 16 15 C 0.15 -0.33 6.35 -4.05 -0.03 -0.35 16 16 N -0.37 -0.37 3.68 -61.37 -0.23 -0.59 16 17 C 0.05 0.00 11.45 -17.22 -0.20 -0.19 16 18 C -0.27 -0.27 10.80 -40.01 -0.43 -0.70 16 19 C 0.04 0.09 12.02 -17.37 -0.21 -0.12 16 20 N -0.29 -1.00 12.42 30.62 0.38 -0.62 16 21 C -0.13 0.05 7.43 -25.91 -0.19 -0.14 16 22 C -0.17 -0.09 9.04 -39.46 -0.36 -0.45 16 23 C -0.11 -0.06 8.66 -39.58 -0.34 -0.41 16 24 C -0.07 -0.11 5.38 -104.61 -0.56 -0.68 16 25 C -0.07 0.00 2.79 36.00 0.10 0.10 16 26 O -0.54 -0.67 12.81 -35.23 -0.45 -1.12 16 27 Si 0.68 -0.81 29.84 -169.99 -5.07 -5.88 16 28 C -0.14 -0.37 8.67 -39.46 -0.34 -0.71 16 29 H 0.06 -0.04 7.68 -51.93 -0.40 -0.43 16 30 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.06 0.00 7.65 -51.93 -0.40 -0.39 16 32 H 0.09 -0.26 7.66 -51.93 -0.40 -0.66 16 33 H 0.10 -0.32 7.66 -51.93 -0.40 -0.71 16 34 H 0.40 -2.05 8.73 -40.82 -0.36 -2.41 16 35 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 36 H 0.09 -0.50 8.08 -51.93 -0.42 -0.92 16 37 H 0.10 -0.46 8.07 -51.93 -0.42 -0.88 16 38 H 0.09 -0.23 7.84 -51.93 -0.41 -0.64 16 39 H 0.17 -0.56 8.06 -52.48 -0.42 -0.98 16 40 H 0.15 -0.11 8.06 -52.49 -0.42 -0.54 16 41 H 0.18 -0.06 8.06 -52.48 -0.42 -0.48 16 42 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 43 H 0.08 0.17 8.14 -51.93 -0.42 -0.25 16 44 H 0.14 -0.40 6.30 -52.48 -0.33 -0.73 16 45 H 0.13 -0.20 4.85 -52.49 -0.25 -0.46 16 46 H 0.08 -0.13 7.96 -51.93 -0.41 -0.55 16 47 H 0.38 -1.06 8.74 45.56 0.40 -0.67 16 48 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 49 H -0.25 -0.45 7.04 56.52 0.40 -0.05 16 50 H 0.14 0.16 6.30 -52.48 -0.33 -0.17 16 LS Contribution 418.12 15.07 6.30 6.30 Total: 0.00 -13.88 418.12 -10.28 -24.16 By element: Atomic # 1 Polarization: -7.01 SS G_CDS: -7.08 Total: -14.09 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: -2.81 Total: -1.38 kcal Atomic # 7 Polarization: -0.24 SS G_CDS: -0.13 Total: -0.37 kcal Atomic # 8 Polarization: -7.26 SS G_CDS: -1.48 Total: -8.74 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.07 Total: -5.88 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -13.88 -10.28 -24.16 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_60476.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.808 kcal (2) G-P(sol) polarization free energy of solvation -13.882 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.926 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.278 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.161 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.648 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds