Wall clock time and date at job start Sun Mar 7 2021 02:37:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46897 * 1 3 3 C 1.46903 * 110.99965 * 2 1 4 4 C 1.50697 * 109.46724 * 66.04595 * 3 2 1 5 5 O 1.21277 * 120.00380 * 0.02562 * 4 3 2 6 6 N 1.34783 * 119.99634 * 180.02562 * 4 3 2 7 7 C 1.46497 * 120.00010 * 180.02562 * 6 4 3 8 8 H 1.09003 * 112.91098 * 23.74319 * 7 6 4 9 9 C 1.53781 * 113.61743 * 154.99700 * 7 6 4 10 10 C 1.53784 * 87.07881 * 139.98129 * 9 7 6 11 11 H 1.09000 * 113.61371 * 89.20494 * 10 9 7 12 12 C 1.53006 * 113.61038 * 220.02057 * 10 9 7 13 13 N 1.46498 * 109.47010 * 185.00489 * 12 10 9 14 14 C 1.34941 * 126.03980 * 125.00325 * 13 12 10 15 15 C 1.35325 * 107.74555 * 180.02562 * 14 13 12 16 16 C 1.39868 * 107.91737 * 0.26206 * 15 14 13 17 17 N 1.30842 * 108.20327 * 359.55203 * 16 15 14 18 18 C 1.53776 * 87.08153 * 334.56613 * 10 9 7 19 19 C 1.39679 * 111.00019 * 236.04799 * 2 1 3 20 20 C 1.38892 * 120.07238 * 243.94879 * 19 2 1 21 21 C 1.50696 * 120.03967 * 359.95836 * 20 19 2 22 22 O 1.42899 * 109.47163 * 284.99587 * 21 20 19 23 23 Si 1.86300 * 109.47026 * 164.99430 * 21 20 19 24 24 C 1.38130 * 119.92315 * 179.97438 * 20 19 2 25 25 C 1.38264 * 120.07243 * 0.02562 * 24 20 19 26 26 C 1.50706 * 119.92259 * 179.97438 * 25 24 20 27 27 F 1.39898 * 109.47019 * 90.00509 * 26 25 24 28 28 F 1.39905 * 109.47084 * 209.99891 * 26 25 24 29 29 F 1.39894 * 109.47297 * 330.00297 * 26 25 24 30 30 C 1.38309 * 120.15077 * 359.97438 * 25 24 20 31 31 C 1.38077 * 120.07561 * 359.74052 * 30 25 24 32 32 H 1.08999 * 109.47196 * 60.00401 * 1 2 3 33 33 H 1.09003 * 109.46889 * 180.02562 * 1 2 3 34 34 H 1.08999 * 109.47155 * 299.99767 * 1 2 3 35 35 H 1.08998 * 109.46858 * 306.04794 * 3 2 1 36 36 H 1.08994 * 109.47093 * 186.04776 * 3 2 1 37 37 H 0.97001 * 120.00272 * 359.97438 * 6 4 3 38 38 H 1.08991 * 113.61285 * 25.42956 * 9 7 6 39 39 H 1.09000 * 113.61189 * 254.52469 * 9 7 6 40 40 H 1.08992 * 109.47371 * 64.99678 * 12 10 9 41 41 H 1.09010 * 109.46873 * 304.99765 * 12 10 9 42 42 H 1.07997 * 126.13283 * 0.03046 * 14 13 12 43 43 H 1.08002 * 126.03725 * 179.97438 * 15 14 13 44 44 H 1.08007 * 125.89524 * 179.73435 * 16 15 14 45 45 H 1.09003 * 113.61214 * 139.98084 * 18 10 9 46 46 H 1.09002 * 113.61588 * 270.88547 * 18 10 9 47 47 H 1.08999 * 109.46799 * 44.99721 * 21 20 19 48 48 H 0.96703 * 113.99354 * 60.00000 * 22 21 20 49 49 H 1.48493 * 110.00298 * 300.00025 * 23 21 20 50 50 H 1.48502 * 109.99687 * 61.32053 * 23 21 20 51 51 H 1.07992 * 119.96180 * 180.02562 * 24 20 19 52 52 H 1.08003 * 119.95869 * 180.02562 * 30 25 24 53 53 H 1.08007 * 120.03859 * 180.27696 * 31 30 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.6369 2.0471 1.2984 5 8 1.0054 1.4453 2.1410 6 7 2.0179 3.3202 1.5233 7 6 1.6699 3.9768 2.7858 8 1 1.4880 3.2702 3.5956 9 6 2.6239 5.1205 3.1688 10 6 1.3808 5.8952 3.6373 11 1 1.1209 5.7142 4.6802 12 6 1.4168 7.3834 3.2836 13 7 0.2546 8.0534 3.8722 14 6 0.2865 9.1259 4.6905 15 6 -0.9904 9.4371 5.0127 16 6 -1.8311 8.5197 4.3740 17 7 -1.0863 7.6935 3.6851 18 6 0.5730 5.0451 2.6425 19 6 1.9695 -0.7283 -1.0817 20 6 2.7118 -1.8813 -0.8606 21 6 2.9791 -2.3480 0.5470 22 8 3.9758 -1.5158 1.1436 23 14 3.5811 -4.1108 0.5130 24 6 3.2049 -2.5994 -1.9326 25 6 2.9607 -2.1713 -3.2245 26 6 3.5008 -2.9571 -4.3915 27 9 2.5616 -3.9178 -4.7814 28 9 3.7527 -2.0905 -5.4606 29 9 4.6893 -3.5923 -4.0160 30 6 2.2220 -1.0236 -3.4481 31 6 1.7211 -0.3043 -2.3812 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3633 -1.0277 0.0005 34 1 -0.3633 0.5138 0.8900 35 1 1.5610 1.9273 -0.8309 36 1 3.0796 1.3444 -0.1083 37 1 2.5233 3.8014 0.8496 38 1 3.1255 5.5751 2.3147 39 1 3.3093 4.8651 3.9769 40 1 1.3935 7.5001 2.2002 41 1 2.3307 7.8284 3.6774 42 1 1.1724 9.6434 5.0278 43 1 -1.3045 10.2475 5.6538 44 1 -2.9092 8.4989 4.4362 45 1 -0.3972 4.7288 3.0257 46 1 0.5140 5.4792 1.6444 47 1 2.0600 -2.2892 1.1300 48 1 3.7294 -0.5820 1.1945 49 1 2.5535 -4.9866 -0.1052 50 1 4.8507 -4.1991 -0.2522 51 1 3.7817 -3.4962 -1.7615 52 1 2.0328 -0.6923 -4.4584 53 1 1.1405 0.5894 -2.5566 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688084_6406254.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:37:27 Heat of formation + Delta-G solvation = -55.107232 kcal Electronic energy + Delta-G solvation = -41082.857958 eV Core-core repulsion = 35316.807341 eV Total energy + Delta-G solvation = -5766.050617 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 425.171 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -51.38533 -48.90754 -48.84960 -42.05468 -41.86916 -40.97928 -39.58485 -37.67885 -37.60921 -35.10958 -33.55102 -33.11972 -32.23938 -30.95761 -29.71948 -28.26949 -27.70599 -27.04387 -26.68401 -25.31958 -24.16477 -23.32498 -22.19559 -21.90702 -21.63053 -21.41426 -20.56936 -19.73837 -19.68490 -19.57948 -18.54285 -18.27918 -18.19413 -17.64005 -17.17690 -17.07428 -16.51619 -16.44427 -16.21745 -16.09710 -15.77354 -15.73733 -15.59956 -15.45792 -15.28605 -15.18612 -15.06563 -15.00690 -14.98879 -14.90987 -14.75460 -14.71299 -14.12614 -14.01708 -13.96873 -13.73749 -13.55955 -13.45673 -13.39498 -13.33263 -13.12998 -12.92065 -12.86216 -12.65447 -12.32308 -12.15759 -11.81182 -11.60380 -11.47451 -11.33500 -11.09290 -10.87036 -10.38082 -10.32208 -10.21425 -10.01721 -9.71619 -9.47405 -4.90777 -0.50713 -0.13630 1.02210 1.29914 1.41620 1.55774 1.59065 1.69533 1.84298 1.90854 1.96819 2.06107 2.46931 2.66032 2.77078 3.17361 3.36535 3.39527 3.44874 3.49050 3.60550 3.72984 3.78913 3.79590 3.93582 3.94411 3.99212 4.02425 4.10020 4.13018 4.23062 4.25229 4.32889 4.34079 4.38134 4.40639 4.43572 4.51268 4.72146 4.75196 4.78911 4.79646 4.83477 4.83945 4.93433 4.95027 5.01574 5.04521 5.07864 5.17339 5.24794 5.26322 5.51141 5.60527 5.76880 5.99613 6.21137 6.57167 6.57473 6.80584 7.27958 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.502 5.502 3 C 0.036 3.964 4 C 0.515 3.485 5 O -0.561 6.561 6 N -0.706 5.706 7 C 0.122 3.878 8 H 0.089 0.911 9 C -0.116 4.116 10 C -0.114 4.114 11 H 0.080 0.920 12 C 0.139 3.861 13 N -0.376 5.376 14 C 0.052 3.948 15 C -0.294 4.294 16 C 0.025 3.975 17 N -0.330 5.330 18 C -0.132 4.132 19 C 0.135 3.865 20 C -0.098 4.098 21 C -0.071 4.071 22 O -0.539 6.539 23 Si 0.788 3.212 24 C -0.083 4.083 25 C -0.187 4.187 26 C 0.507 3.493 27 F -0.180 7.180 28 F -0.172 7.172 29 F -0.184 7.184 30 C -0.052 4.052 31 C -0.134 4.134 32 H 0.048 0.952 33 H 0.067 0.933 34 H 0.081 0.919 35 H 0.100 0.900 36 H 0.127 0.873 37 H 0.418 0.582 38 H 0.118 0.882 39 H 0.087 0.913 40 H 0.093 0.907 41 H 0.129 0.871 42 H 0.206 0.794 43 H 0.159 0.841 44 H 0.193 0.807 45 H 0.042 0.958 46 H 0.091 0.909 47 H 0.087 0.913 48 H 0.371 0.629 49 H -0.267 1.267 50 H -0.282 1.282 51 H 0.127 0.873 52 H 0.161 0.839 53 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.535 8.287 0.714 8.695 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.224 5.224 3 C -0.093 4.093 4 C 0.301 3.699 5 O -0.439 6.439 6 N -0.359 5.359 7 C 0.016 3.984 8 H 0.108 0.892 9 C -0.154 4.154 10 C -0.133 4.133 11 H 0.098 0.902 12 C 0.018 3.982 13 N -0.159 5.159 14 C -0.095 4.095 15 C -0.323 4.323 16 C -0.161 4.161 17 N -0.152 5.152 18 C -0.171 4.171 19 C 0.041 3.959 20 C -0.099 4.099 21 C -0.180 4.180 22 O -0.346 6.346 23 Si 0.691 3.309 24 C -0.101 4.101 25 C -0.188 4.188 26 C 0.453 3.547 27 F -0.162 7.162 28 F -0.154 7.154 29 F -0.166 7.166 30 C -0.070 4.070 31 C -0.154 4.154 32 H 0.067 0.933 33 H 0.085 0.915 34 H 0.100 0.900 35 H 0.118 0.882 36 H 0.145 0.855 37 H 0.255 0.745 38 H 0.136 0.864 39 H 0.105 0.895 40 H 0.111 0.889 41 H 0.147 0.853 42 H 0.223 0.777 43 H 0.176 0.824 44 H 0.209 0.791 45 H 0.061 0.939 46 H 0.110 0.890 47 H 0.105 0.895 48 H 0.219 0.781 49 H -0.193 1.193 50 H -0.209 1.209 51 H 0.144 0.856 52 H 0.178 0.822 53 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 2.894 5.297 0.443 6.052 hybrid contribution -0.970 2.184 -1.351 2.745 sum 1.924 7.480 -0.908 7.777 Atomic orbital electron populations 1.22584 0.84022 1.03020 1.02441 1.59162 1.10002 1.13322 1.39867 1.22220 1.03670 0.87837 0.95548 1.20722 0.78616 0.81806 0.88756 1.90721 1.40525 1.65039 1.47618 1.45811 1.57383 1.13050 1.19642 1.22374 0.96563 0.92588 0.86855 0.89242 1.23300 0.95442 0.93705 1.02961 1.22504 0.98331 0.92966 0.99536 0.90169 1.22034 0.84677 0.91820 0.99622 1.49002 1.05516 1.23884 1.37487 1.23196 1.00998 0.90819 0.94440 1.21862 0.92382 1.06674 1.11394 1.24310 1.01336 0.94027 0.96382 1.77316 0.88004 1.24786 1.25141 1.23388 0.97479 0.96379 0.99858 1.18824 0.94382 0.93136 0.89527 1.20313 0.98196 0.95380 0.96057 1.25177 0.97204 1.06437 0.89164 1.86682 1.42769 1.22871 1.82240 0.92342 0.77473 0.72932 0.88197 1.20789 0.98255 0.99498 0.91593 1.19982 1.06887 1.00004 0.91950 1.18389 0.75444 0.77867 0.82985 1.93234 1.65221 1.65665 1.92040 1.93206 1.94218 1.69295 1.58646 1.93195 1.48739 1.83347 1.91289 1.21130 0.92849 0.91313 1.01728 1.21958 1.00424 1.01651 0.91370 0.93328 0.91457 0.90039 0.88248 0.85482 0.74482 0.86385 0.89478 0.88877 0.85295 0.77679 0.82361 0.79065 0.93879 0.89039 0.89503 0.78076 1.19312 1.20948 0.85607 0.82171 0.81698 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 8.93 127.69 1.14 1.11 16 2 N -0.50 1.11 3.19 -724.44 -2.31 -1.20 16 3 C 0.04 -0.26 4.91 85.56 0.42 0.16 16 4 C 0.51 -1.09 7.55 87.66 0.66 -0.43 16 5 O -0.56 -4.28 13.91 -3.02 -0.04 -4.32 16 6 N -0.71 5.10 5.35 -440.04 -2.36 2.74 16 7 C 0.12 -0.50 4.24 45.52 0.19 -0.31 16 8 H 0.09 0.19 7.47 -2.39 -0.02 0.17 16 9 C -0.12 1.16 7.39 31.12 0.23 1.39 16 10 C -0.11 0.61 3.83 -10.27 -0.04 0.57 16 11 H 0.08 -0.09 8.14 -2.39 -0.02 -0.11 16 12 C 0.14 -0.95 6.35 86.38 0.55 -0.40 16 13 N -0.38 -0.22 3.68 -348.05 -1.28 -1.50 16 14 C 0.05 -0.08 11.45 83.54 0.96 0.87 16 15 C -0.29 -0.34 10.80 21.99 0.24 -0.10 16 16 C 0.02 0.10 12.03 85.23 1.02 1.13 16 17 N -0.33 -2.21 12.42 -57.02 -0.71 -2.91 16 18 C -0.13 0.29 7.43 31.12 0.23 0.52 16 19 C 0.14 -0.19 4.61 38.21 0.18 -0.01 16 20 C -0.10 -0.27 5.28 -19.73 -0.10 -0.37 16 21 C -0.07 -0.20 2.30 71.23 0.16 -0.04 16 22 O -0.54 -2.08 12.65 -148.98 -1.89 -3.97 16 23 Si 0.79 1.97 30.41 68.60 2.09 4.06 16 24 C -0.08 -0.39 8.01 22.25 0.18 -0.21 16 25 C -0.19 -0.54 5.46 -19.84 -0.11 -0.65 16 26 C 0.51 2.56 3.36 71.24 0.24 2.80 16 27 F -0.18 -1.21 17.30 44.97 0.78 -0.44 16 28 F -0.17 -0.71 16.46 44.97 0.74 0.03 16 29 F -0.18 -1.43 16.46 44.97 0.74 -0.69 16 30 C -0.05 0.12 9.39 22.25 0.21 0.33 16 31 C -0.13 0.63 8.70 22.40 0.19 0.83 16 32 H 0.05 -0.23 7.46 -2.39 -0.02 -0.25 16 33 H 0.07 0.01 8.13 -2.39 -0.02 -0.01 16 34 H 0.08 0.28 5.88 -2.39 -0.01 0.27 16 35 H 0.10 -1.21 7.49 -2.39 -0.02 -1.23 16 36 H 0.13 -1.35 8.06 -2.39 -0.02 -1.37 16 37 H 0.42 -5.85 8.73 -92.71 -0.81 -6.66 16 38 H 0.12 -1.78 8.08 -2.39 -0.02 -1.80 16 39 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 40 H 0.09 -0.76 7.84 -2.39 -0.02 -0.78 16 41 H 0.13 -1.68 8.07 -2.38 -0.02 -1.70 16 42 H 0.21 -1.99 8.06 -2.91 -0.02 -2.01 16 43 H 0.16 -0.39 8.06 -2.91 -0.02 -0.41 16 44 H 0.19 -0.04 8.06 -2.91 -0.02 -0.07 16 45 H 0.04 0.21 8.14 -2.39 -0.02 0.19 16 46 H 0.09 -0.33 7.90 -2.39 -0.02 -0.35 16 47 H 0.09 0.23 7.78 -2.39 -0.02 0.21 16 48 H 0.37 0.18 8.38 -74.06 -0.62 -0.44 16 49 H -0.27 -1.50 7.11 99.48 0.71 -0.79 16 50 H -0.28 -2.22 6.81 99.48 0.68 -1.54 16 51 H 0.13 0.82 4.47 -2.91 -0.01 0.80 16 52 H 0.16 -1.00 7.60 -2.91 -0.02 -1.02 16 53 H 0.17 -1.71 7.16 -2.91 -0.02 -1.73 16 Total: 0.00 -24.42 446.85 1.88 -22.54 By element: Atomic # 1 Polarization: -21.09 SS G_CDS: -0.43 Total: -21.52 kcal Atomic # 6 Polarization: 0.63 SS G_CDS: 6.55 Total: 7.19 kcal Atomic # 7 Polarization: 3.78 SS G_CDS: -6.66 Total: -2.88 kcal Atomic # 8 Polarization: -6.36 SS G_CDS: -1.93 Total: -8.29 kcal Atomic # 9 Polarization: -3.35 SS G_CDS: 2.26 Total: -1.10 kcal Atomic # 14 Polarization: 1.97 SS G_CDS: 2.09 Total: 4.06 kcal Total: -24.42 1.88 -22.54 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_6406254.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.571 kcal (2) G-P(sol) polarization free energy of solvation -24.419 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.990 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.883 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.536 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.107 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds