Wall clock time and date at job start Sun Mar 7 2021 02:37:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.47311 * 2 1 4 4 C 1.50696 * 109.47377 * 120.00320 * 2 1 3 5 5 C 1.35447 * 125.56537 * 244.97405 * 4 2 1 6 6 C 1.39834 * 107.86845 * 179.75878 * 5 4 2 7 7 C 1.37876 * 107.08440 * 0.41653 * 6 5 4 8 8 C 1.46676 * 126.23936 * 179.84239 * 7 6 5 9 9 O 1.21699 * 119.99648 * 359.69712 * 8 7 6 10 10 N 1.34774 * 120.00622 * 179.69093 * 8 7 6 11 11 C 1.46496 * 120.00099 * 180.02562 * 10 8 7 12 12 H 1.08994 * 112.91109 * 23.75176 * 11 10 8 13 13 C 1.53787 * 113.61210 * 155.00440 * 11 10 8 14 14 C 1.53779 * 87.07963 * 139.97940 * 13 11 10 15 15 H 1.09006 * 113.61280 * 89.11401 * 14 13 11 16 16 C 1.52998 * 113.61250 * 220.01477 * 14 13 11 17 17 N 1.46496 * 109.47269 * 185.00070 * 16 14 13 18 18 C 1.34951 * 126.03866 * 125.00249 * 17 16 14 19 19 C 1.35320 * 107.74708 * 179.97438 * 18 17 16 20 20 C 1.39869 * 107.91915 * 359.97438 * 19 18 17 21 21 N 1.30836 * 108.20186 * 359.74095 * 20 19 18 22 22 C 1.53779 * 87.08402 * 334.56577 * 14 13 11 23 23 N 1.35537 * 125.56248 * 64.99386 * 4 2 1 24 24 H 0.96703 * 113.99742 * 299.99947 * 1 2 3 25 25 H 1.09007 * 109.46891 * 240.00393 * 2 1 3 26 26 H 1.48500 * 110.00023 * 300.00363 * 3 2 1 27 27 H 1.48503 * 109.99719 * 61.32048 * 3 2 1 28 28 H 1.07999 * 126.06906 * 0.02562 * 5 4 2 29 29 H 1.07997 * 126.46384 * 180.26099 * 6 5 4 30 30 H 0.97002 * 119.99411 * 0.02562 * 10 8 7 31 31 H 1.08997 * 113.61028 * 254.52900 * 13 11 10 32 32 H 1.08998 * 113.61447 * 25.34434 * 13 11 10 33 33 H 1.09007 * 109.47269 * 305.00322 * 16 14 13 34 34 H 1.08998 * 109.47235 * 64.99931 * 16 14 13 35 35 H 1.08004 * 126.12695 * 359.95327 * 18 17 16 36 36 H 1.08002 * 126.03580 * 180.02562 * 19 18 17 37 37 H 1.08000 * 125.89286 * 180.02562 * 20 19 18 38 38 H 1.09002 * 113.61557 * 270.88569 * 22 14 13 39 39 H 1.09004 * 113.61501 * 139.97990 * 22 14 13 40 40 H 0.97001 * 125.68113 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6335 -0.1396 2.2382 6 6 2.9033 -1.1299 3.1879 7 6 2.3539 -2.3034 2.7166 8 6 2.3948 -3.6092 3.3834 9 8 2.9588 -3.7275 4.4553 10 7 1.8077 -4.6779 2.8093 11 6 1.8482 -5.9819 3.4757 12 1 1.9913 -5.9034 4.5534 13 6 0.6938 -6.9151 3.0740 14 6 1.7222 -8.0584 3.0744 15 1 1.8309 -8.5475 4.0424 16 6 1.5371 -9.0496 1.9237 17 7 2.4816 -10.1588 2.0779 18 6 2.1658 -11.4701 2.1217 19 6 3.3163 -12.1666 2.2719 20 6 4.3712 -11.2495 2.3210 21 7 3.8726 -10.0461 2.1989 22 6 2.7935 -6.9896 2.8006 23 7 1.7548 -2.0251 1.5089 24 1 -0.3933 0.4417 0.7651 25 1 1.7923 -0.5138 -0.8901 26 1 1.5615 2.4679 -1.2084 27 1 1.5880 2.4585 1.2243 28 1 2.9285 0.8975 2.2998 29 1 3.4427 -1.0007 4.1145 30 1 1.3584 -4.5835 1.9548 31 1 -0.0727 -7.0170 3.8421 32 1 0.2799 -6.6986 2.0891 33 1 0.5178 -9.4357 1.9371 34 1 1.7218 -8.5443 0.9757 35 1 1.1728 -11.8887 2.0501 36 1 3.4043 -13.2408 2.3408 37 1 5.4172 -11.4931 2.4350 38 1 2.9546 -6.7945 1.7403 39 1 3.7220 -7.1518 3.3480 40 1 1.2851 -2.6637 0.9499 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:37:33 Heat of formation + Delta-G solvation = 88.343098 kcal Electronic energy + Delta-G solvation = -23584.226736 eV Core-core repulsion = 19983.135135 eV Total energy + Delta-G solvation = -3601.091600 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 303.137 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -42.54718 -42.05381 -40.91752 -39.27039 -37.90175 -35.24397 -33.65783 -32.15070 -31.40322 -30.92777 -28.69270 -26.96935 -26.85771 -24.56216 -22.88495 -21.93561 -21.72122 -21.40884 -21.31533 -20.79732 -19.73849 -18.33723 -18.19797 -17.31393 -16.78460 -16.64153 -16.29108 -16.04547 -15.70435 -15.40162 -15.16912 -15.01604 -14.98110 -14.52328 -14.38436 -14.01431 -13.95720 -13.73759 -13.68054 -13.58348 -13.48955 -13.06439 -12.40195 -12.33231 -11.98403 -11.92604 -11.61781 -11.43683 -11.19637 -10.88271 -10.31214 -10.17691 -10.09317 -9.48583 -9.28937 -4.99873 0.34384 1.00756 1.08401 1.53901 1.56531 1.57181 1.80327 2.00148 2.00451 2.12365 2.36316 3.16465 3.16927 3.28450 3.49638 3.50906 3.63168 3.76549 3.89561 3.93098 4.04255 4.14442 4.19672 4.24691 4.25688 4.39034 4.48345 4.55693 4.63899 4.72048 4.81144 4.90123 4.98435 5.03703 5.06712 5.09835 5.14935 5.39265 5.58334 5.77541 5.81129 6.09406 6.16614 6.20470 6.40113 6.82825 7.10707 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.062 4.062 3 Si 0.718 3.282 4 C 0.023 3.977 5 C -0.199 4.199 6 C -0.098 4.098 7 C -0.051 4.051 8 C 0.591 3.409 9 O -0.523 6.523 10 N -0.722 5.722 11 C 0.123 3.877 12 H 0.120 0.880 13 C -0.138 4.138 14 C -0.118 4.118 15 H 0.101 0.899 16 C 0.145 3.855 17 N -0.373 5.373 18 C 0.050 3.950 19 C -0.274 4.274 20 C 0.042 3.958 21 N -0.289 5.289 22 C -0.134 4.134 23 N -0.524 5.524 24 H 0.380 0.620 25 H 0.119 0.881 26 H -0.256 1.256 27 H -0.255 1.255 28 H 0.151 0.849 29 H 0.153 0.847 30 H 0.394 0.606 31 H 0.082 0.918 32 H 0.089 0.911 33 H 0.098 0.902 34 H 0.085 0.915 35 H 0.172 0.828 36 H 0.147 0.853 37 H 0.182 0.818 38 H 0.085 0.915 39 H 0.079 0.921 40 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.688 -0.921 -3.308 4.361 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.171 4.171 3 Si 0.617 3.383 4 C -0.095 4.095 5 C -0.224 4.224 6 C -0.124 4.124 7 C -0.164 4.164 8 C 0.379 3.621 9 O -0.398 6.398 10 N -0.372 5.372 11 C 0.019 3.981 12 H 0.138 0.862 13 C -0.177 4.177 14 C -0.138 4.138 15 H 0.119 0.881 16 C 0.024 3.976 17 N -0.156 5.156 18 C -0.096 4.096 19 C -0.303 4.303 20 C -0.144 4.144 21 N -0.111 5.111 22 C -0.172 4.172 23 N -0.120 5.120 24 H 0.229 0.771 25 H 0.137 0.863 26 H -0.180 1.180 27 H -0.179 1.179 28 H 0.169 0.831 29 H 0.171 0.829 30 H 0.228 0.772 31 H 0.101 0.899 32 H 0.108 0.892 33 H 0.116 0.884 34 H 0.103 0.897 35 H 0.190 0.810 36 H 0.165 0.835 37 H 0.199 0.801 38 H 0.104 0.896 39 H 0.098 0.902 40 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -2.337 0.737 -3.201 4.031 hybrid contribution -1.752 -1.620 -0.171 2.393 sum -4.089 -0.883 -3.371 5.373 Atomic orbital electron populations 1.86596 1.17569 1.80243 1.49684 1.24901 0.84040 1.11893 0.96247 0.94193 0.91437 0.72110 0.80548 1.21084 1.04656 0.84247 0.99470 1.20740 1.06013 1.00353 0.95253 1.21346 1.00819 0.90082 1.00157 1.20482 1.09817 0.95888 0.90234 1.17094 0.78372 0.82115 0.84554 1.90878 1.43535 1.84430 1.20938 1.45859 1.57827 1.09135 1.24421 1.22559 0.96543 0.79970 0.99047 0.86229 1.23389 0.96904 0.94538 1.02892 1.22625 0.97816 0.94017 0.99292 0.88069 1.21721 0.90659 0.86011 0.99209 1.48725 1.05468 1.05178 1.56213 1.22608 1.00702 0.84297 1.01993 1.21566 0.91576 1.00924 1.16276 1.23960 1.00540 0.90084 0.99803 1.77398 0.87620 1.22585 1.23473 1.23448 0.98346 0.93751 1.01686 1.41946 1.43133 1.09322 1.17632 0.77125 0.86308 1.18042 1.17881 0.83149 0.82925 0.77206 0.89928 0.89224 0.88358 0.89682 0.81049 0.83531 0.80058 0.89625 0.90214 0.74695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.32 12.88 -35.23 -0.45 -0.13 16 2 C -0.06 0.12 3.08 36.00 0.11 0.23 16 3 Si 0.72 -1.64 30.56 -169.99 -5.19 -6.83 16 4 C 0.02 -0.02 6.46 -81.95 -0.53 -0.55 16 5 C -0.20 0.01 9.32 -39.98 -0.37 -0.36 16 6 C -0.10 -0.17 10.65 -39.12 -0.42 -0.58 16 7 C -0.05 -0.07 7.06 -81.98 -0.58 -0.65 16 8 C 0.59 1.53 7.79 -12.86 -0.10 1.43 16 9 O -0.52 -3.43 16.48 5.19 0.09 -3.34 16 10 N -0.72 0.55 5.35 -54.32 -0.29 0.26 16 11 C 0.12 -0.08 4.24 -67.12 -0.28 -0.37 16 12 H 0.12 0.16 7.46 -51.93 -0.39 -0.23 16 13 C -0.14 0.45 7.39 -25.92 -0.19 0.26 16 14 C -0.12 0.22 3.83 -89.81 -0.34 -0.13 16 15 H 0.10 -0.05 8.14 -51.93 -0.42 -0.47 16 16 C 0.15 -0.31 6.35 -4.04 -0.03 -0.33 16 17 N -0.37 -0.38 3.68 -61.36 -0.23 -0.60 16 18 C 0.05 0.00 11.45 -17.22 -0.20 -0.19 16 19 C -0.27 -0.25 10.80 -40.01 -0.43 -0.68 16 20 C 0.04 0.08 12.03 -17.37 -0.21 -0.12 16 21 N -0.29 -0.97 12.42 30.62 0.38 -0.59 16 22 C -0.13 0.05 7.43 -25.92 -0.19 -0.15 16 23 N -0.52 0.57 5.99 -5.70 -0.03 0.53 16 24 H 0.38 -1.14 8.70 45.56 0.40 -0.74 16 25 H 0.12 -0.34 7.96 -51.93 -0.41 -0.76 16 26 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 27 H -0.25 0.04 7.11 56.52 0.40 0.44 16 28 H 0.15 -0.28 6.19 -52.49 -0.32 -0.60 16 29 H 0.15 0.24 8.06 -52.49 -0.42 -0.19 16 30 H 0.39 -1.41 7.86 -40.82 -0.32 -1.73 16 31 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 32 H 0.09 -0.43 8.08 -51.93 -0.42 -0.85 16 33 H 0.10 -0.44 8.07 -51.93 -0.42 -0.86 16 34 H 0.08 -0.21 7.84 -51.93 -0.41 -0.62 16 35 H 0.17 -0.55 8.06 -52.48 -0.42 -0.98 16 36 H 0.15 -0.13 8.06 -52.49 -0.42 -0.55 16 37 H 0.18 -0.09 8.06 -52.49 -0.42 -0.51 16 38 H 0.09 -0.04 7.90 -51.93 -0.41 -0.45 16 39 H 0.08 0.16 8.14 -51.93 -0.42 -0.26 16 40 H 0.42 -1.46 8.19 -40.82 -0.33 -1.79 16 LS Contribution 344.36 15.07 5.19 5.19 Total: 0.00 -9.90 344.36 -9.50 -19.40 By element: Atomic # 1 Polarization: -6.49 SS G_CDS: -5.20 Total: -11.69 kcal Atomic # 6 Polarization: 1.56 SS G_CDS: -3.76 Total: -2.20 kcal Atomic # 7 Polarization: -0.22 SS G_CDS: -0.17 Total: -0.39 kcal Atomic # 8 Polarization: -3.10 SS G_CDS: -0.37 Total: -3.47 kcal Atomic # 14 Polarization: -1.64 SS G_CDS: -5.19 Total: -6.83 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -9.90 -9.50 -19.40 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 107.743 kcal (2) G-P(sol) polarization free energy of solvation -9.896 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 97.847 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.504 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.400 kcal (6) G-S(sol) free energy of system = (1) + (5) 88.343 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds