Wall clock time and date at job start Sun Mar 7 2021 02:37:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35965 * 117.00231 * 2 1 4 4 C 1.39447 * 120.12320 * 180.02562 * 3 2 1 5 5 O 1.34770 * 133.24223 * 0.36484 * 4 3 2 6 6 C 1.34929 * 110.83967 * 180.08738 * 5 4 3 7 7 C 1.46996 * 125.13551 * 179.81176 * 6 5 4 8 8 O 1.21655 * 119.99457 * 179.69524 * 7 6 5 9 9 N 1.34775 * 120.00361 * 359.69443 * 7 6 5 10 10 C 1.46501 * 119.99930 * 179.97438 * 9 7 6 11 11 H 1.08995 * 112.85197 * 336.19831 * 10 9 7 12 12 C 1.53782 * 113.68683 * 107.46689 * 10 9 7 13 13 C 1.53776 * 87.08009 * 139.99195 * 12 10 9 14 14 H 1.09003 * 113.69332 * 89.12939 * 13 12 10 15 15 C 1.53006 * 113.61554 * 220.01694 * 13 12 10 16 16 N 1.46504 * 109.46883 * 272.49982 * 15 13 12 17 17 C 1.34945 * 126.03464 * 125.00022 * 16 15 13 18 18 C 1.35322 * 107.74328 * 179.97438 * 17 16 15 19 19 C 1.39863 * 107.91864 * 359.97438 * 18 17 16 20 20 N 1.30841 * 108.20499 * 359.74195 * 19 18 17 21 21 C 1.53779 * 113.61412 * 205.00118 * 10 9 7 22 22 C 1.35807 * 109.71982 * 359.54541 * 6 5 4 23 23 C 1.40611 * 119.13326 * 179.97438 * 4 3 2 24 24 C 1.39775 * 120.12406 * 0.02562 * 23 4 3 25 25 C 1.50694 * 120.09436 * 179.97438 * 24 23 4 26 26 O 1.42904 * 109.46968 * 75.00623 * 25 24 23 27 27 Si 1.86305 * 109.47035 * 194.99963 * 25 24 23 28 28 C 1.36639 * 119.80940 * 359.97438 * 24 23 4 29 29 C 1.38261 * 120.11593 * 359.97438 * 3 2 1 30 30 H 1.08998 * 109.47253 * 299.99828 * 1 2 3 31 31 H 1.09000 * 109.47360 * 59.99908 * 1 2 3 32 32 H 1.09002 * 109.47397 * 179.97438 * 1 2 3 33 33 H 0.96997 * 119.99914 * 0.02562 * 9 7 6 34 34 H 1.09004 * 113.61971 * 25.44070 * 12 10 9 35 35 H 1.09005 * 113.61642 * 254.54205 * 12 10 9 36 36 H 1.09001 * 109.47002 * 32.49479 * 15 13 12 37 37 H 1.08993 * 109.46955 * 152.49916 * 15 13 12 38 38 H 1.08003 * 126.13098 * 359.97438 * 17 16 15 39 39 H 1.08001 * 126.03875 * 180.02562 * 18 17 16 40 40 H 1.08004 * 125.89957 * 179.97438 * 19 18 17 41 41 H 1.08996 * 113.61570 * 105.38927 * 21 10 9 42 42 H 1.09004 * 113.69064 * 334.49015 * 21 10 9 43 43 H 1.08003 * 126.95445 * 180.29920 * 22 6 5 44 44 H 1.08998 * 109.47715 * 315.00088 * 25 24 23 45 45 H 0.96696 * 114.00470 * 59.99936 * 26 25 24 46 46 H 1.48497 * 109.99978 * 180.02562 * 27 25 24 47 47 H 1.48497 * 109.99908 * 301.32186 * 27 25 24 48 48 H 1.08003 * 119.74792 * 179.97438 * 28 24 23 49 49 H 1.08003 * 119.66691 * 0.02562 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2874 -0.0005 5 8 4.4140 0.3574 -0.0074 6 6 5.6317 0.9387 -0.0025 7 6 6.9130 0.2184 -0.0037 8 8 7.9595 0.8388 -0.0046 9 7 6.9286 -1.1293 -0.0038 10 6 8.2057 -1.8470 -0.0055 11 1 9.0244 -1.2533 -0.4120 12 6 8.5390 -2.5183 1.3373 13 6 9.0682 -3.7092 0.5210 14 1 10.1227 -3.6260 0.2580 15 6 8.7113 -5.0706 1.1212 16 7 9.7377 -5.4608 2.0912 17 6 9.5245 -5.7970 3.3806 18 6 10.7239 -6.0911 3.9338 19 6 11.7034 -5.9296 2.9486 20 7 11.1127 -5.5575 1.8420 21 6 8.1163 -3.2620 -0.6010 22 6 5.4944 2.2898 -0.0024 23 6 4.0553 2.5510 -0.0011 24 6 3.2765 3.7117 -0.0005 25 6 3.9381 5.0656 -0.0005 26 8 4.4599 5.3408 -1.3021 27 14 2.6865 6.3684 0.4549 28 6 1.9135 3.6151 0.0000 29 6 1.2956 2.3725 -0.0005 30 1 -0.3634 0.5138 0.8900 31 1 -0.3634 0.5138 -0.8900 32 1 -0.3634 -1.0277 -0.0005 33 1 6.0942 -1.6239 -0.0035 34 1 7.6602 -2.7558 1.9368 35 1 9.3120 -1.9999 1.9047 36 1 7.7450 -5.0052 1.6213 37 1 8.6599 -5.8155 0.3272 38 1 8.5680 -5.8262 3.8813 39 1 10.8945 -6.3973 4.9553 40 1 12.7638 -6.0886 3.0777 41 1 8.5480 -3.3441 -1.5984 42 1 7.1223 -3.7041 -0.5322 43 1 6.2874 3.0230 -0.0035 44 1 4.7508 5.0730 0.7258 45 1 3.7908 5.3502 -2.0002 46 1 3.3264 7.7084 0.4578 47 1 1.5576 6.3472 -0.5096 48 1 1.3127 4.5125 0.0008 49 1 0.2173 2.3120 -0.0005 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688084_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:37:36 Heat of formation + Delta-G solvation = 47.938071 kcal Electronic energy + Delta-G solvation = -34192.712575 eV Core-core repulsion = 29477.714368 eV Total energy + Delta-G solvation = -4714.998207 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.156 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -43.79268 -42.07260 -41.31202 -40.61098 -39.56050 -39.14211 -37.13488 -35.36558 -33.69400 -33.61806 -31.95168 -31.11648 -30.91775 -28.83607 -28.32133 -26.81674 -26.37884 -25.62255 -24.03511 -23.63648 -22.07396 -22.05247 -21.81261 -21.56328 -20.68235 -19.69610 -19.05467 -18.58447 -18.31299 -17.89119 -17.79848 -17.42985 -17.02524 -16.63187 -16.39878 -16.27084 -16.22379 -15.92569 -15.84071 -15.64716 -15.13451 -14.75332 -14.60604 -14.58131 -14.51111 -14.22902 -14.22035 -13.69131 -13.54344 -13.52097 -13.44569 -13.38399 -13.27879 -12.96075 -12.49254 -12.43450 -12.27557 -12.13971 -11.92661 -11.67560 -11.64494 -11.58365 -11.45765 -11.05423 -10.62581 -10.38266 -10.30051 -9.85849 -9.47714 -9.03350 -4.90214 -0.71149 0.07325 0.57351 1.00629 1.12979 1.28987 1.58247 1.65866 1.82546 1.87321 1.96001 1.97249 2.12154 2.36853 3.13143 3.32061 3.37210 3.43486 3.50738 3.52754 3.63716 3.68075 3.78317 3.84613 3.89221 3.95550 4.08754 4.13826 4.17000 4.30628 4.32730 4.42007 4.42568 4.47185 4.48838 4.56379 4.62680 4.70463 4.76638 4.77341 4.80680 4.84366 4.85933 4.92442 4.96525 5.02461 5.06681 5.16486 5.19389 5.29460 5.41309 5.55800 5.75698 6.15686 6.19411 6.26783 6.48582 6.77489 6.78692 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.332 6.332 3 C 0.139 3.861 4 C 0.023 3.977 5 O -0.178 6.178 6 C -0.032 4.032 7 C 0.602 3.398 8 O -0.549 6.549 9 N -0.690 5.690 10 C 0.114 3.886 11 H 0.099 0.901 12 C -0.140 4.140 13 C -0.113 4.113 14 H 0.085 0.915 15 C 0.140 3.860 16 N -0.375 5.375 17 C 0.054 3.946 18 C -0.294 4.294 19 C 0.029 3.971 20 N -0.338 5.338 21 C -0.118 4.118 22 C -0.114 4.114 23 C -0.096 4.096 24 C -0.100 4.100 25 C -0.091 4.091 26 O -0.548 6.548 27 Si 0.783 3.217 28 C -0.088 4.088 29 C -0.165 4.165 30 H 0.077 0.923 31 H 0.073 0.927 32 H 0.116 0.884 33 H 0.420 0.580 34 H 0.105 0.895 35 H 0.053 0.947 36 H 0.129 0.871 37 H 0.094 0.906 38 H 0.206 0.794 39 H 0.160 0.840 40 H 0.195 0.805 41 H 0.086 0.914 42 H 0.119 0.881 43 H 0.169 0.831 44 H 0.114 0.886 45 H 0.386 0.614 46 H -0.306 1.306 47 H -0.261 1.261 48 H 0.165 0.835 49 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.599 -2.630 2.793 12.217 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.246 6.246 3 C 0.093 3.907 4 C -0.026 4.026 5 O -0.080 6.080 6 C -0.083 4.083 7 C 0.388 3.612 8 O -0.428 6.428 9 N -0.340 5.340 10 C 0.010 3.990 11 H 0.117 0.883 12 C -0.178 4.178 13 C -0.133 4.133 14 H 0.104 0.896 15 C 0.020 3.980 16 N -0.157 5.157 17 C -0.093 4.093 18 C -0.323 4.323 19 C -0.156 4.156 20 N -0.161 5.161 21 C -0.157 4.157 22 C -0.135 4.135 23 C -0.098 4.098 24 C -0.101 4.101 25 C -0.198 4.198 26 O -0.357 6.357 27 Si 0.686 3.314 28 C -0.106 4.106 29 C -0.184 4.184 30 H 0.095 0.905 31 H 0.091 0.909 32 H 0.134 0.866 33 H 0.258 0.742 34 H 0.124 0.876 35 H 0.072 0.928 36 H 0.147 0.853 37 H 0.112 0.888 38 H 0.223 0.777 39 H 0.178 0.822 40 H 0.212 0.788 41 H 0.105 0.895 42 H 0.137 0.863 43 H 0.187 0.813 44 H 0.132 0.868 45 H 0.236 0.764 46 H -0.234 1.234 47 H -0.187 1.187 48 H 0.183 0.817 49 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges -10.639 -1.643 1.524 10.873 hybrid contribution 0.286 -0.417 -0.346 0.613 sum -10.353 -2.059 1.178 10.621 Atomic orbital electron populations 1.23490 0.75299 1.06065 1.03150 1.86141 1.24302 1.25720 1.88405 1.17959 0.86032 0.86871 0.99848 1.19191 0.88239 0.87041 1.08086 1.84001 1.12578 1.34946 1.76494 1.21896 0.84024 0.92665 1.09676 1.16749 0.84958 0.83043 0.76484 1.90899 1.31606 1.68383 1.51936 1.45816 1.10932 1.04680 1.72528 1.22635 0.85744 0.92374 0.98223 0.88313 1.23549 1.01564 0.96184 0.96544 1.22519 1.00361 0.93114 0.97274 0.89634 1.22009 0.88533 0.95918 0.91569 1.48951 1.05508 1.51840 1.09447 1.23177 1.01794 0.99079 0.85246 1.21868 0.91919 1.16002 1.02510 1.24314 1.01653 0.98893 0.90788 1.77268 0.88861 1.25127 1.24799 1.23333 1.01380 0.92266 0.98682 1.22853 0.95457 0.94495 1.00667 1.19567 0.92239 0.92901 1.05050 1.19548 0.93504 0.93834 1.03234 1.25398 1.07740 0.98758 0.87906 1.86609 1.38980 1.92793 1.17280 0.93893 0.75408 0.73403 0.88698 1.20889 0.92869 0.98889 0.97930 1.21378 1.01833 0.89572 1.05583 0.90462 0.90890 0.86554 0.74210 0.87639 0.92832 0.85339 0.88789 0.77735 0.82213 0.78821 0.89521 0.86258 0.81325 0.86823 0.76435 1.23395 1.18704 0.81749 0.80250 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.34 10.50 -93.16 -0.98 -1.32 16 3 C 0.14 0.27 6.70 22.57 0.15 0.42 16 4 C 0.02 0.14 7.35 23.14 0.17 0.31 16 5 O -0.18 -1.27 10.28 -13.36 -0.14 -1.41 16 6 C -0.03 -0.26 7.07 24.00 0.17 -0.09 16 7 C 0.60 4.98 7.80 86.54 0.67 5.65 16 8 O -0.55 -8.42 16.43 -4.21 -0.07 -8.49 16 9 N -0.69 -0.72 5.35 -443.71 -2.38 -3.09 16 10 C 0.11 0.01 4.24 45.52 0.19 0.20 16 11 H 0.10 0.51 7.46 -2.39 -0.02 0.49 16 12 C -0.14 0.16 7.43 31.12 0.23 0.40 16 13 C -0.11 0.28 3.87 -10.27 -0.04 0.24 16 14 H 0.09 0.28 7.97 -2.39 -0.02 0.26 16 15 C 0.14 -0.60 6.35 86.38 0.55 -0.06 16 16 N -0.37 -0.98 3.68 -348.04 -1.28 -2.25 16 17 C 0.05 0.00 11.45 83.54 0.96 0.96 16 18 C -0.29 -0.74 10.80 21.99 0.24 -0.50 16 19 C 0.03 0.16 12.02 85.23 1.02 1.19 16 20 N -0.34 -2.94 12.28 -57.02 -0.70 -3.64 16 21 C -0.12 0.68 7.39 31.12 0.23 0.91 16 22 C -0.11 -0.93 10.68 23.79 0.25 -0.68 16 23 C -0.10 -0.57 6.16 -20.24 -0.12 -0.69 16 24 C -0.10 -0.10 5.26 -19.87 -0.10 -0.20 16 25 C -0.09 -0.02 2.71 71.23 0.19 0.17 16 26 O -0.55 -2.06 12.88 -148.98 -1.92 -3.98 16 27 Si 0.78 -3.09 30.25 68.60 2.08 -1.01 16 28 C -0.09 0.33 8.62 22.02 0.19 0.52 16 29 C -0.17 0.66 9.03 22.40 0.20 0.86 16 30 H 0.08 -0.88 7.66 -2.39 -0.02 -0.89 16 31 H 0.07 -0.79 7.66 -2.39 -0.02 -0.80 16 32 H 0.12 -1.24 8.14 -2.39 -0.02 -1.26 16 33 H 0.42 -1.55 8.44 -92.71 -0.78 -2.34 16 34 H 0.11 -0.49 7.90 -2.38 -0.02 -0.51 16 35 H 0.05 0.21 8.14 -2.38 -0.02 0.19 16 36 H 0.13 -1.38 7.77 -2.39 -0.02 -1.40 16 37 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 38 H 0.21 -1.65 8.06 -2.91 -0.02 -1.67 16 39 H 0.16 -0.22 8.06 -2.91 -0.02 -0.24 16 40 H 0.20 0.15 8.06 -2.91 -0.02 0.13 16 41 H 0.09 -0.46 8.14 -2.39 -0.02 -0.47 16 42 H 0.12 -1.28 8.08 -2.39 -0.02 -1.30 16 43 H 0.17 1.37 8.06 -2.91 -0.02 1.34 16 44 H 0.11 0.06 7.96 -2.39 -0.02 0.04 16 45 H 0.39 -1.08 8.70 -74.06 -0.64 -1.72 16 46 H -0.31 -1.43 7.11 99.48 0.71 -0.72 16 47 H -0.26 0.86 6.69 99.48 0.67 1.53 16 48 H 0.17 -1.47 4.81 -2.91 -0.01 -1.48 16 49 H 0.18 -1.97 6.26 -2.91 -0.02 -1.99 16 Total: 0.00 -28.40 415.65 0.48 -27.93 By element: Atomic # 1 Polarization: -12.94 SS G_CDS: -0.41 Total: -13.35 kcal Atomic # 6 Polarization: 4.34 SS G_CDS: 6.27 Total: 10.61 kcal Atomic # 7 Polarization: -4.63 SS G_CDS: -4.36 Total: -8.98 kcal Atomic # 8 Polarization: -12.09 SS G_CDS: -3.10 Total: -15.19 kcal Atomic # 14 Polarization: -3.09 SS G_CDS: 2.08 Total: -1.01 kcal Total: -28.40 0.48 -27.93 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.863 kcal (2) G-P(sol) polarization free energy of solvation -28.403 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.461 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.478 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.925 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.938 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds