Wall clock time and date at job start Sun Mar 7 2021 02:37:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.47218 * 2 1 4 4 C 1.50699 * 109.47229 * 239.99467 * 2 1 3 5 5 C 1.32766 * 124.71550 * 300.00218 * 4 2 1 6 6 C 1.44425 * 113.08895 * 179.97438 * 5 4 2 7 7 C 1.47191 * 123.46449 * 179.97438 * 6 5 4 8 8 O 1.21634 * 119.99892 * 0.02716 * 7 6 5 9 9 N 1.34770 * 119.99817 * 180.02562 * 7 6 5 10 10 C 1.46503 * 119.99738 * 180.02562 * 9 7 6 11 11 H 1.08999 * 112.85132 * 334.66501 * 10 9 7 12 12 C 1.53778 * 113.61332 * 105.86946 * 10 9 7 13 13 C 1.53949 * 87.02283 * 139.94917 * 12 10 9 14 14 H 1.09004 * 113.61565 * 89.19391 * 13 12 10 15 15 C 1.52999 * 113.67152 * 220.06329 * 13 12 10 16 16 N 1.46499 * 109.46990 * 272.56268 * 15 13 12 17 17 C 1.34945 * 126.03817 * 125.00164 * 16 15 13 18 18 C 1.35310 * 107.74878 * 179.97438 * 17 16 15 19 19 C 1.39867 * 107.92008 * 359.97438 * 18 17 16 20 20 N 1.30845 * 108.20135 * 359.74365 * 19 18 17 21 21 C 1.53775 * 87.11207 * 334.63573 * 13 12 10 22 22 C 1.36014 * 113.07275 * 359.97438 * 6 5 4 23 23 S 1.70444 * 110.81789 * 0.26734 * 22 6 5 24 24 H 0.96694 * 113.99943 * 60.00422 * 1 2 3 25 25 H 1.09003 * 109.46885 * 119.99697 * 2 1 3 26 26 H 1.48506 * 109.99600 * 298.68042 * 3 2 1 27 27 H 1.48497 * 110.00007 * 59.99580 * 3 2 1 28 28 H 1.08006 * 123.45324 * 359.97438 * 5 4 2 29 29 H 0.97004 * 120.00621 * 0.02562 * 9 7 6 30 30 H 1.09006 * 113.61018 * 254.52562 * 12 10 9 31 31 H 1.09006 * 113.61867 * 25.42776 * 12 10 9 32 32 H 1.09000 * 109.46533 * 32.55595 * 15 13 12 33 33 H 1.08998 * 109.47534 * 152.55939 * 15 13 12 34 34 H 1.08009 * 126.12722 * 359.97438 * 17 16 15 35 35 H 1.08003 * 126.04450 * 179.97438 * 18 17 16 36 36 H 1.07999 * 125.90489 * 180.02562 * 19 18 17 37 37 H 1.09003 * 113.61368 * 270.81335 * 21 13 12 38 38 H 1.09002 * 113.69577 * 139.91910 * 21 13 12 39 39 H 1.08002 * 124.58647 * 179.97438 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.6689 -1.9764 -1.5326 6 6 2.2772 -2.4006 -2.7719 7 6 2.1352 -3.7582 -3.3228 8 8 1.4771 -4.5902 -2.7277 9 7 2.7343 -4.0792 -4.4865 10 6 2.5925 -5.4302 -5.0350 11 1 2.3857 -6.1783 -4.2697 12 6 1.6456 -5.5078 -6.2442 13 6 2.6498 -6.4955 -6.8655 14 1 2.4587 -7.5359 -6.6025 15 6 2.8628 -6.2920 -8.3669 16 7 1.8612 -7.0598 -9.1108 17 6 1.0104 -6.5685 -10.0359 18 6 0.2522 -7.5951 -10.4855 19 6 0.6537 -8.7536 -9.8125 20 7 1.6221 -8.4350 -8.9924 21 6 3.7268 -5.8278 -5.9944 22 6 2.9949 -1.4167 -3.3777 23 16 2.9493 0.0189 -2.4601 24 1 -0.3933 0.4416 -0.7650 25 1 1.7923 -0.5138 0.8900 26 1 1.5879 2.4585 -1.2243 27 1 1.5615 2.4679 1.2084 28 1 1.0627 -2.6226 -0.9150 29 1 3.2595 -3.4158 -4.9609 30 1 0.6784 -5.9544 -6.0134 31 1 1.5597 -4.5696 -6.7926 32 1 2.7619 -5.2337 -8.6079 33 1 3.8606 -6.6338 -8.6420 34 1 0.9462 -5.5400 -10.3595 35 1 -0.5256 -7.5313 -11.2321 36 1 0.2394 -9.7415 -9.9497 37 1 4.2110 -4.9773 -6.4743 38 1 4.4382 -6.5311 -5.5616 39 1 3.5259 -1.5313 -4.3111 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_6894386.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:37:45 Heat of formation + Delta-G solvation = 75.514903 kcal Electronic energy + Delta-G solvation = -23191.379396 eV Core-core repulsion = 19616.083540 eV Total energy + Delta-G solvation = -3575.295856 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.098 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -42.07028 -41.28265 -39.83298 -38.74078 -37.15469 -35.19787 -33.61284 -31.75691 -30.94713 -28.62591 -27.03027 -26.91724 -26.03101 -23.82430 -22.09564 -22.04763 -21.54575 -20.94465 -20.20362 -19.06656 -18.31540 -18.12643 -17.72809 -17.11690 -16.47363 -16.42642 -16.25256 -15.82157 -15.65225 -15.39033 -15.01472 -14.63071 -14.42830 -14.27035 -14.10188 -13.75933 -13.70167 -13.65111 -13.59526 -13.40311 -12.94162 -12.72487 -12.43116 -12.36757 -11.98515 -11.86129 -11.59825 -11.48815 -10.95951 -10.77521 -10.29029 -10.16405 -10.03822 -9.55695 -9.45971 -5.16872 -0.42073 0.28574 0.63217 0.85888 1.01915 1.13929 1.46977 1.57745 1.82548 2.01007 2.06597 2.31155 3.19596 3.24131 3.33505 3.40240 3.48617 3.63205 3.77607 3.81323 3.90234 3.94274 4.04168 4.21522 4.24927 4.34519 4.41882 4.43853 4.56859 4.60823 4.66010 4.75299 4.83769 4.89018 4.91870 4.99173 5.14186 5.16228 5.17424 5.44708 5.78394 6.10812 6.25619 6.39927 6.83133 7.17125 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.522 6.522 2 C -0.033 4.033 3 Si 0.651 3.349 4 C -0.241 4.241 5 C -0.054 4.054 6 C -0.155 4.155 7 C 0.578 3.422 8 O -0.530 6.530 9 N -0.717 5.717 10 C 0.127 3.873 11 H 0.119 0.881 12 C -0.146 4.146 13 C -0.120 4.120 14 H 0.110 0.890 15 C 0.146 3.854 16 N -0.371 5.371 17 C 0.051 3.949 18 C -0.275 4.275 19 C 0.044 3.956 20 N -0.295 5.295 21 C -0.137 4.137 22 C -0.207 4.207 23 S 0.198 5.802 24 H 0.378 0.622 25 H 0.128 0.872 26 H -0.239 1.239 27 H -0.234 1.234 28 H 0.157 0.843 29 H 0.399 0.601 30 H 0.075 0.925 31 H 0.085 0.915 32 H 0.096 0.904 33 H 0.088 0.912 34 H 0.172 0.828 35 H 0.147 0.853 36 H 0.183 0.817 37 H 0.090 0.910 38 H 0.084 0.916 39 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.708 5.305 -3.559 7.936 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.328 6.328 2 C -0.145 4.145 3 Si 0.549 3.451 4 C -0.358 4.358 5 C -0.083 4.083 6 C -0.174 4.174 7 C 0.364 3.636 8 O -0.407 6.407 9 N -0.368 5.368 10 C 0.022 3.978 11 H 0.137 0.863 12 C -0.185 4.185 13 C -0.139 4.139 14 H 0.129 0.871 15 C 0.025 3.975 16 N -0.153 5.153 17 C -0.095 4.095 18 C -0.304 4.304 19 C -0.142 4.142 20 N -0.116 5.116 21 C -0.175 4.175 22 C -0.345 4.345 23 S 0.465 5.535 24 H 0.226 0.774 25 H 0.146 0.854 26 H -0.163 1.163 27 H -0.157 1.157 28 H 0.174 0.826 29 H 0.234 0.766 30 H 0.093 0.907 31 H 0.104 0.896 32 H 0.114 0.886 33 H 0.106 0.894 34 H 0.189 0.811 35 H 0.165 0.835 36 H 0.200 0.800 37 H 0.108 0.892 38 H 0.102 0.898 39 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges 5.670 6.345 -1.797 8.697 hybrid contribution -1.956 -1.016 -1.486 2.658 sum 3.714 5.329 -3.283 7.278 Atomic orbital electron populations 1.86649 1.17123 1.79850 1.49217 1.24417 0.83898 1.10026 0.96174 0.95335 0.91620 0.74991 0.83133 1.24752 1.08530 0.99112 1.03404 1.21059 0.98182 0.94364 0.94702 1.20264 1.04527 0.94676 0.97909 1.17663 0.78933 0.86617 0.80356 1.90832 1.39860 1.50352 1.59627 1.45813 1.53540 1.13807 1.23612 1.22476 0.96332 0.84526 0.94466 0.86334 1.23594 0.98885 0.99263 0.96771 1.22732 0.97448 1.01236 0.92524 0.87141 1.21725 0.90612 0.94661 0.90543 1.48701 1.29010 1.06270 1.31363 1.22574 0.93242 1.00273 0.93372 1.21556 1.07526 0.92362 1.08962 1.23937 0.95171 1.00078 0.94992 1.77345 1.19575 0.90931 1.23792 1.23365 0.96725 1.01019 0.96432 1.25788 1.04544 0.98982 1.05223 1.83109 1.46279 1.11430 1.12708 0.77422 0.85412 1.16302 1.15678 0.82586 0.76611 0.90666 0.89632 0.88595 0.89430 0.81124 0.83542 0.80027 0.89175 0.89768 0.81197 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.45 12.85 -35.23 -0.45 -0.90 16 2 C -0.03 0.03 2.95 36.00 0.11 0.13 16 3 Si 0.65 -1.14 30.91 -169.99 -5.25 -6.39 16 4 C -0.24 0.09 5.68 -36.18 -0.21 -0.11 16 5 C -0.05 -0.08 9.91 -39.02 -0.39 -0.47 16 6 C -0.16 -0.13 5.98 -104.63 -0.63 -0.75 16 7 C 0.58 1.40 7.79 -12.63 -0.10 1.30 16 8 O -0.53 -3.54 16.41 5.25 0.09 -3.46 16 9 N -0.72 0.74 5.33 -54.16 -0.29 0.45 16 10 C 0.13 -0.10 4.21 -67.11 -0.28 -0.38 16 11 H 0.12 0.17 7.50 -51.93 -0.39 -0.22 16 12 C -0.15 0.15 7.44 -25.83 -0.19 -0.04 16 13 C -0.12 0.20 3.87 -89.72 -0.35 -0.15 16 14 H 0.11 0.06 7.97 -51.93 -0.41 -0.35 16 15 C 0.15 -0.29 6.35 -4.04 -0.03 -0.32 16 16 N -0.37 -0.44 3.68 -61.37 -0.23 -0.66 16 17 C 0.05 0.01 11.45 -17.23 -0.20 -0.18 16 18 C -0.27 -0.30 10.80 -40.02 -0.43 -0.73 16 19 C 0.04 0.09 12.03 -17.36 -0.21 -0.11 16 20 N -0.29 -1.06 12.28 30.63 0.38 -0.69 16 21 C -0.14 0.43 7.39 -25.92 -0.19 0.24 16 22 C -0.21 0.42 10.38 29.93 0.31 0.73 16 23 S 0.20 -0.44 20.18 -107.50 -2.17 -2.61 16 24 H 0.38 -0.79 8.70 45.56 0.40 -0.39 16 25 H 0.13 -0.19 7.96 -51.93 -0.41 -0.60 16 26 H -0.24 0.07 7.11 56.52 0.40 0.47 16 27 H -0.23 -0.28 7.11 56.52 0.40 0.12 16 28 H 0.16 0.41 8.06 -52.48 -0.42 -0.02 16 29 H 0.40 -1.63 7.21 -40.82 -0.29 -1.92 16 30 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 31 H 0.09 -0.18 7.90 -51.93 -0.41 -0.59 16 32 H 0.10 -0.42 7.78 -51.93 -0.40 -0.83 16 33 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 34 H 0.17 -0.52 8.06 -52.48 -0.42 -0.95 16 35 H 0.15 -0.10 8.06 -52.48 -0.42 -0.52 16 36 H 0.18 -0.08 8.06 -52.49 -0.42 -0.50 16 37 H 0.09 -0.46 8.07 -51.93 -0.42 -0.88 16 38 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 39 H 0.17 -0.88 7.01 -52.49 -0.37 -1.24 16 LS Contribution 348.85 15.07 5.26 5.26 Total: 0.00 -9.58 348.85 -10.32 -19.90 By element: Atomic # 1 Polarization: -5.19 SS G_CDS: -4.87 Total: -10.07 kcal Atomic # 6 Polarization: 1.93 SS G_CDS: -2.78 Total: -0.85 kcal Atomic # 7 Polarization: -0.76 SS G_CDS: -0.14 Total: -0.90 kcal Atomic # 8 Polarization: -3.99 SS G_CDS: -0.37 Total: -4.35 kcal Atomic # 14 Polarization: -1.14 SS G_CDS: -5.25 Total: -6.39 kcal Atomic # 16 Polarization: -0.44 SS G_CDS: -2.17 Total: -2.61 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -9.58 -10.32 -19.90 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_6894386.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.418 kcal (2) G-P(sol) polarization free energy of solvation -9.581 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 85.836 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.321 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.903 kcal (6) G-S(sol) free energy of system = (1) + (5) 75.515 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds