Wall clock time and date at job start Sun Mar 7 2021 02:38:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86300 * 109.46672 * 2 1 4 4 C 1.50699 * 109.47376 * 239.99966 * 2 1 3 5 5 C 1.34232 * 126.50125 * 105.31445 * 4 2 1 6 6 N 1.36834 * 109.93815 * 180.17028 * 5 4 2 7 7 C 1.46498 * 125.06445 * 179.81451 * 6 5 4 8 8 C 1.50697 * 109.47228 * 264.69578 * 7 6 5 9 9 O 1.21280 * 119.99897 * 359.97438 * 8 7 6 10 10 N 1.34770 * 120.00374 * 180.02562 * 8 7 6 11 11 C 1.46494 * 120.00413 * 180.02562 * 10 8 7 12 12 H 1.09003 * 112.85333 * 336.19168 * 11 10 8 13 13 C 1.53789 * 113.69484 * 107.46106 * 11 10 8 14 14 C 1.53778 * 87.08118 * 139.99478 * 13 11 10 15 15 H 1.08999 * 113.69349 * 89.12851 * 14 13 11 16 16 C 1.53000 * 113.60995 * 220.02008 * 14 13 11 17 17 N 1.46503 * 109.47420 * 272.49532 * 16 14 13 18 18 C 1.34940 * 126.03757 * 124.99460 * 17 16 14 19 19 C 1.35317 * 107.74438 * 179.77616 * 18 17 16 20 20 C 1.39872 * 107.92021 * 0.23195 * 19 18 17 21 21 N 1.30838 * 108.20312 * 359.97438 * 20 19 18 22 22 C 1.53778 * 87.08252 * 334.56648 * 14 13 11 23 23 C 1.37698 * 109.87134 * 359.54528 * 6 5 4 24 24 C 1.39080 * 133.51087 * 180.23981 * 23 6 5 25 25 C 1.37795 * 119.77707 * 180.02562 * 24 23 6 26 26 C 1.38790 * 120.66674 * 359.97438 * 25 24 23 27 27 C 1.36663 * 120.52444 * 0.02562 * 26 25 24 28 28 C 1.39591 * 119.76668 * 359.97438 * 27 26 25 29 29 H 0.96702 * 114.00287 * 299.99591 * 1 2 3 30 30 H 1.09004 * 109.47283 * 119.99288 * 2 1 3 31 31 H 1.48508 * 109.99786 * 178.68262 * 3 2 1 32 32 H 1.48501 * 110.00133 * 299.99556 * 3 2 1 33 33 H 1.08000 * 125.03099 * 0.02562 * 5 4 2 34 34 H 1.08995 * 109.47155 * 144.69017 * 7 6 5 35 35 H 1.09003 * 109.46899 * 24.69231 * 7 6 5 36 36 H 0.97006 * 119.99804 * 359.97438 * 10 8 7 37 37 H 1.08997 * 113.61385 * 25.44359 * 13 11 10 38 38 H 1.09002 * 113.61087 * 254.54119 * 13 11 10 39 39 H 1.09005 * 109.47317 * 152.49754 * 16 14 13 40 40 H 1.08999 * 109.47532 * 32.50057 * 16 14 13 41 41 H 1.08002 * 126.13053 * 0.04913 * 18 17 16 42 42 H 1.08003 * 126.04109 * 180.21059 * 19 18 17 43 43 H 1.08001 * 125.89461 * 180.02562 * 20 19 18 44 44 H 1.09005 * 113.61548 * 139.98412 * 22 14 13 45 45 H 1.08999 * 113.61631 * 270.88757 * 22 14 13 46 46 H 1.07997 * 120.11193 * 0.05260 * 24 23 6 47 47 H 1.07997 * 119.66736 * 180.02562 * 25 24 23 48 48 H 1.07994 * 119.73971 * 179.97438 * 26 25 24 49 49 H 1.07998 * 120.11521 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.4663 -0.1380 -2.3204 6 7 2.8029 -1.0990 -3.2345 7 6 3.4077 -0.8404 -4.5435 8 6 2.3281 -0.7841 -5.5934 9 8 1.1677 -0.9446 -5.2792 10 7 2.6520 -0.5563 -6.8816 11 6 1.6024 -0.5009 -7.9021 12 1 0.7021 -1.0432 -7.6132 13 6 1.3251 0.9177 -8.4271 14 6 1.1908 0.2895 -9.8243 15 1 0.1785 -0.0370 -10.0623 16 6 1.8212 1.1294 -10.9370 17 7 0.8404 2.0981 -11.4330 18 6 1.0103 3.4350 -11.5028 19 6 -0.1209 3.9680 -12.0198 20 6 -1.0147 2.9215 -12.2697 21 7 -0.4404 1.8003 -11.9159 22 6 2.0999 -0.8422 -9.3167 23 6 2.4941 -2.3457 -2.7382 24 6 2.6288 -3.6362 -3.2392 25 6 2.2147 -4.7107 -2.4824 26 6 1.6641 -4.5193 -1.2229 27 6 1.5224 -3.2600 -0.7113 28 6 1.9352 -2.1571 -1.4608 29 1 -0.3934 0.4416 0.7651 30 1 1.7924 -0.5137 0.8901 31 1 3.5345 1.7704 0.0321 32 1 1.5614 2.4679 -1.2085 33 1 2.6077 0.9240 -2.4568 34 1 4.1077 -1.6403 -4.7847 35 1 3.9386 0.1112 -4.5169 36 1 3.5801 -0.4283 -7.1330 37 1 2.1757 1.5926 -8.3317 38 1 0.3972 1.3488 -8.0512 39 1 2.1321 0.4770 -11.7530 40 1 2.6892 1.6594 -10.5449 41 1 1.8928 3.9812 -11.2041 42 1 -0.3019 5.0163 -12.2062 43 1 -2.0070 3.0216 -12.6840 44 1 1.7974 -1.8320 -9.6589 45 1 3.1623 -0.6485 -9.4644 46 1 3.0569 -3.7955 -4.2178 47 1 2.3206 -5.7120 -2.8730 48 1 1.3442 -5.3723 -0.6429 49 1 1.0927 -3.1187 0.2693 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:38:00 Heat of formation + Delta-G solvation = 118.579745 kcal Electronic energy + Delta-G solvation = -31916.464453 eV Core-core repulsion = 27620.930353 eV Total energy + Delta-G solvation = -4295.534100 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.168 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.51073 -42.09539 -41.16303 -39.58873 -37.94932 -37.49134 -35.28492 -34.21481 -33.54475 -31.40817 -30.98687 -30.19479 -29.30779 -28.31496 -26.98332 -25.80121 -24.31210 -23.56177 -22.58106 -22.09269 -21.77479 -21.59646 -20.65585 -20.42049 -18.60360 -18.44943 -18.20624 -18.09444 -17.68513 -17.15098 -16.53985 -16.41801 -16.36395 -16.10183 -15.65561 -15.47484 -15.16240 -14.93006 -14.80604 -14.67111 -14.58113 -14.38894 -14.30248 -14.03737 -13.81249 -13.74049 -13.53160 -13.50129 -13.44705 -12.99470 -12.64902 -12.46690 -12.45837 -12.36505 -12.04333 -11.91649 -11.67142 -11.65038 -11.52440 -11.09703 -10.43968 -10.33222 -10.24274 -10.10435 -9.49347 -9.04246 -8.55052 -4.98020 0.25271 0.77909 0.98515 1.33634 1.35104 1.36550 1.54635 1.64968 1.74242 1.98035 2.01248 2.07006 3.08022 3.16748 3.26614 3.32664 3.41738 3.43587 3.57577 3.66643 3.73617 3.76281 3.79377 3.83917 3.90683 3.97472 4.08784 4.18649 4.29953 4.30717 4.35241 4.36340 4.44295 4.50974 4.53819 4.68708 4.69230 4.76491 4.77077 4.81868 4.88150 4.88854 4.97503 5.04594 5.12860 5.23793 5.32458 5.62959 5.75294 5.78397 5.83912 5.87713 6.07174 6.11576 6.27717 6.34942 6.79893 6.82849 6.97522 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.033 4.033 3 Si 0.683 3.317 4 C -0.150 4.150 5 C 0.064 3.936 6 N -0.466 5.466 7 C 0.091 3.909 8 C 0.491 3.509 9 O -0.509 6.509 10 N -0.719 5.719 11 C 0.126 3.874 12 H 0.118 0.882 13 C -0.146 4.146 14 C -0.120 4.120 15 H 0.111 0.889 16 C 0.146 3.854 17 N -0.372 5.372 18 C 0.051 3.949 19 C -0.274 4.274 20 C 0.045 3.955 21 N -0.295 5.295 22 C -0.136 4.136 23 C 0.109 3.891 24 C -0.128 4.128 25 C -0.096 4.096 26 C -0.145 4.145 27 C -0.063 4.063 28 C -0.085 4.085 29 H 0.378 0.622 30 H 0.070 0.930 31 H -0.256 1.256 32 H -0.255 1.255 33 H 0.162 0.838 34 H 0.119 0.881 35 H 0.120 0.880 36 H 0.402 0.598 37 H 0.086 0.914 38 H 0.074 0.926 39 H 0.088 0.912 40 H 0.096 0.904 41 H 0.172 0.828 42 H 0.147 0.853 43 H 0.183 0.817 44 H 0.083 0.917 45 H 0.091 0.909 46 H 0.115 0.885 47 H 0.126 0.874 48 H 0.124 0.876 49 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.478 2.865 0.179 7.086 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.144 4.144 3 Si 0.584 3.416 4 C -0.158 4.158 5 C -0.061 4.061 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.274 3.726 9 O -0.382 6.382 10 N -0.372 5.372 11 C 0.021 3.979 12 H 0.136 0.864 13 C -0.185 4.185 14 C -0.139 4.139 15 H 0.129 0.871 16 C 0.025 3.975 17 N -0.154 5.154 18 C -0.095 4.095 19 C -0.304 4.304 20 C -0.141 4.141 21 N -0.116 5.116 22 C -0.175 4.175 23 C 0.005 3.995 24 C -0.148 4.148 25 C -0.115 4.115 26 C -0.164 4.164 27 C -0.082 4.082 28 C -0.089 4.089 29 H 0.224 0.776 30 H 0.088 0.912 31 H -0.181 1.181 32 H -0.179 1.179 33 H 0.179 0.821 34 H 0.137 0.863 35 H 0.138 0.862 36 H 0.237 0.763 37 H 0.104 0.896 38 H 0.093 0.907 39 H 0.106 0.894 40 H 0.114 0.886 41 H 0.189 0.811 42 H 0.165 0.835 43 H 0.200 0.800 44 H 0.102 0.898 45 H 0.109 0.891 46 H 0.133 0.867 47 H 0.144 0.856 48 H 0.142 0.858 49 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 6.333 1.741 -0.710 6.606 hybrid contribution 0.640 0.652 -0.632 1.111 sum 6.973 2.393 -1.343 7.494 Atomic orbital electron populations 1.86577 1.17573 1.81656 1.49247 1.23938 0.85305 1.09025 0.96142 0.95274 0.80685 0.77861 0.87810 1.19532 1.08234 0.91763 0.96234 1.21392 1.02061 0.93525 0.89126 1.43147 1.54087 1.04639 1.13070 1.21591 0.94626 1.05890 0.81379 1.21039 0.90811 0.77017 0.83688 1.90835 1.19870 1.46857 1.80647 1.45926 1.10703 1.73691 1.06838 1.22487 0.92307 0.97303 0.85816 0.86440 1.23559 1.02854 0.97006 0.95076 1.22700 1.01420 0.96377 0.93432 0.87132 1.21720 0.88468 0.90426 0.96895 1.48701 1.12441 1.05259 1.49020 1.22573 1.00773 0.84601 1.01533 1.21565 0.94973 1.00821 1.13002 1.23944 1.00492 0.90050 0.99650 1.77347 0.91717 1.23762 1.18815 1.23371 1.00118 0.99522 0.94481 1.18169 1.01475 0.85803 0.94067 1.19951 1.05370 0.89159 1.00325 1.20833 0.98270 0.97935 0.94438 1.20674 1.02392 0.96915 0.96438 1.20285 0.97753 0.90841 0.99276 1.18927 1.03210 0.92588 0.94222 0.77552 0.91228 1.18056 1.17922 0.82121 0.86273 0.86159 0.76346 0.89593 0.90747 0.89400 0.88596 0.81121 0.83505 0.79993 0.89810 0.89070 0.86683 0.85612 0.85778 0.85859 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.41 12.86 -35.23 -0.45 -1.86 16 2 C -0.03 -0.06 3.05 36.00 0.11 0.05 16 3 Si 0.68 -0.18 30.78 -169.99 -5.23 -5.41 16 4 C -0.15 -0.72 5.61 -102.71 -0.58 -1.30 16 5 C 0.06 0.25 9.89 -16.73 -0.17 0.08 16 6 N -0.47 -1.50 2.27 -115.72 -0.26 -1.76 16 7 C 0.09 -0.10 6.48 -5.20 -0.03 -0.13 16 8 C 0.49 0.59 7.90 -10.99 -0.09 0.51 16 9 O -0.51 -3.48 16.02 5.56 0.09 -3.40 16 10 N -0.72 1.57 5.36 -53.02 -0.28 1.29 16 11 C 0.13 -0.14 4.24 -67.12 -0.28 -0.42 16 12 H 0.12 0.20 7.46 -51.93 -0.39 -0.18 16 13 C -0.15 0.18 7.43 -25.92 -0.19 -0.01 16 14 C -0.12 0.20 3.87 -89.81 -0.35 -0.15 16 15 H 0.11 0.08 7.96 -51.93 -0.41 -0.33 16 16 C 0.15 -0.30 6.35 -4.04 -0.03 -0.32 16 17 N -0.37 -0.44 3.68 -61.36 -0.23 -0.66 16 18 C 0.05 0.01 11.45 -17.23 -0.20 -0.19 16 19 C -0.27 -0.30 10.80 -40.01 -0.43 -0.73 16 20 C 0.04 0.10 12.03 -17.36 -0.21 -0.11 16 21 N -0.29 -1.08 12.26 30.63 0.38 -0.70 16 22 C -0.14 0.46 7.39 -25.92 -0.19 0.26 16 23 C 0.11 0.53 6.80 -83.99 -0.57 -0.04 16 24 C -0.13 -0.44 10.00 -39.43 -0.39 -0.83 16 25 C -0.10 -0.27 10.01 -39.54 -0.40 -0.66 16 26 C -0.15 -0.45 9.97 -39.95 -0.40 -0.85 16 27 C -0.06 -0.27 10.05 -39.65 -0.40 -0.67 16 28 C -0.09 -0.48 6.35 -105.14 -0.67 -1.15 16 29 H 0.38 -1.10 8.74 45.56 0.40 -0.71 16 30 H 0.07 0.02 7.96 -51.93 -0.41 -0.39 16 31 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 32 H -0.25 -0.68 7.05 56.52 0.40 -0.28 16 33 H 0.16 0.31 6.30 -52.49 -0.33 -0.02 16 34 H 0.12 -0.44 8.14 -51.93 -0.42 -0.87 16 35 H 0.12 -0.51 8.12 -51.93 -0.42 -0.93 16 36 H 0.40 -2.29 8.73 -40.82 -0.36 -2.65 16 37 H 0.09 -0.22 7.90 -51.93 -0.41 -0.63 16 38 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 39 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 40 H 0.10 -0.44 7.77 -51.93 -0.40 -0.84 16 41 H 0.17 -0.53 8.06 -52.49 -0.42 -0.96 16 42 H 0.15 -0.11 8.06 -52.48 -0.42 -0.53 16 43 H 0.18 -0.07 8.06 -52.49 -0.42 -0.49 16 44 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 45 H 0.09 -0.49 8.08 -51.93 -0.42 -0.91 16 46 H 0.12 0.15 8.06 -52.49 -0.42 -0.27 16 47 H 0.13 0.05 8.06 -52.49 -0.42 -0.38 16 48 H 0.12 0.11 8.06 -52.49 -0.42 -0.32 16 49 H 0.12 0.34 8.06 -52.49 -0.42 -0.08 16 LS Contribution 415.03 15.07 6.25 6.25 Total: 0.00 -14.17 415.03 -12.21 -26.37 By element: Atomic # 1 Polarization: -6.44 SS G_CDS: -7.01 Total: -13.45 kcal Atomic # 6 Polarization: -1.21 SS G_CDS: -5.46 Total: -6.66 kcal Atomic # 7 Polarization: -1.45 SS G_CDS: -0.40 Total: -1.84 kcal Atomic # 8 Polarization: -4.90 SS G_CDS: -0.36 Total: -5.26 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: -5.23 Total: -5.41 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -14.17 -12.21 -26.37 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 144.953 kcal (2) G-P(sol) polarization free energy of solvation -14.167 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 130.786 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.206 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.373 kcal (6) G-S(sol) free energy of system = (1) + (5) 118.580 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds