Wall clock time and date at job start Sun Mar 7 2021 02:38:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.36777 * 125.80136 * 2 1 4 4 C 1.47261 * 126.93813 * 359.97438 * 3 2 1 5 5 O 1.21626 * 120.00597 * 359.71197 * 4 3 2 6 6 N 1.34782 * 119.99963 * 179.70613 * 4 3 2 7 7 C 1.46492 * 120.00298 * 179.97438 * 6 4 3 8 8 H 1.09009 * 112.84927 * 23.80670 * 7 6 4 9 9 C 1.53779 * 113.61690 * 155.00607 * 7 6 4 10 10 C 1.53776 * 87.08683 * 140.06830 * 9 7 6 11 11 H 1.08996 * 113.61649 * 89.19948 * 10 9 7 12 12 C 1.52997 * 113.61673 * 220.02123 * 10 9 7 13 13 N 1.46495 * 109.47240 * 183.46526 * 12 10 9 14 14 C 1.34957 * 126.03329 * 125.02128 * 13 12 10 15 15 C 1.35317 * 107.74055 * 179.97438 * 14 13 12 16 16 C 1.39868 * 107.92640 * 0.02562 * 15 14 13 17 17 N 1.30844 * 108.19764 * 359.97438 * 16 15 14 18 18 C 1.53792 * 87.16909 * 334.60913 * 10 9 7 19 19 C 1.46679 * 106.11761 * 179.72153 * 3 2 1 20 20 C 1.34486 * 106.33289 * 0.24136 * 19 3 2 21 21 C 1.50703 * 125.57512 * 180.02562 * 20 19 3 22 22 O 1.42902 * 109.46646 * 64.99971 * 21 20 19 23 23 Si 1.86295 * 109.47446 * 184.99847 * 21 20 19 24 24 N 1.34659 * 125.80754 * 180.13152 * 2 1 3 25 25 H 1.08996 * 109.47408 * 90.00151 * 1 2 3 26 26 H 1.08999 * 109.46882 * 209.99922 * 1 2 3 27 27 H 1.09001 * 109.46986 * 330.00010 * 1 2 3 28 28 H 0.97005 * 119.99351 * 0.02562 * 6 4 3 29 29 H 1.09002 * 113.61108 * 25.51344 * 9 7 6 30 30 H 1.09010 * 113.68860 * 254.63056 * 9 7 6 31 31 H 1.09000 * 109.47373 * 63.46378 * 12 10 9 32 32 H 1.09005 * 109.47107 * 303.46886 * 12 10 9 33 33 H 1.07995 * 126.12756 * 0.02562 * 14 13 12 34 34 H 1.08004 * 126.03278 * 180.02562 * 15 14 13 35 35 H 1.07995 * 125.89923 * 180.25722 * 16 15 14 36 36 H 1.09001 * 113.61089 * 139.94128 * 18 10 9 37 37 H 1.08991 * 113.61131 * 270.84260 * 18 10 9 38 38 H 1.07999 * 126.83899 * 180.25697 * 19 3 2 39 39 H 1.08996 * 109.47303 * 305.00609 * 21 20 19 40 40 H 0.96702 * 114.00168 * 60.00648 * 22 21 20 41 41 H 1.48498 * 110.00080 * 180.02562 * 23 21 20 42 42 H 1.48499 * 110.00186 * 301.32347 * 23 21 20 43 43 H 0.97000 * 124.84247 * 0.02820 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8702 2.5156 -0.0005 5 8 0.6839 2.7840 -0.0063 6 7 2.7849 3.5055 0.0055 7 6 2.3503 4.9045 0.0044 8 1 1.3448 5.0357 0.4044 9 6 3.3837 5.8711 0.6065 10 6 3.0066 6.8502 -0.5178 11 1 2.1816 7.5142 -0.2600 12 6 4.2051 7.5940 -1.1103 13 7 3.7365 8.5572 -2.1097 14 6 4.0008 9.8806 -2.1219 15 6 3.3887 10.4134 -3.2048 16 6 2.7273 9.3804 -3.8770 17 7 2.9353 8.2673 -3.2216 18 6 2.5762 5.6228 -1.3384 19 6 3.6882 0.6153 0.0068 20 6 3.6096 -0.7273 0.0049 21 6 4.7820 -1.6742 0.0107 22 8 5.5031 -1.5317 1.2362 23 14 4.1667 -3.4254 -0.1478 24 7 2.2948 -1.0921 -0.0025 25 1 -0.3634 0.0000 -1.0276 26 1 -0.3633 -0.8900 0.5138 27 1 -0.3633 0.8900 0.5138 28 1 3.7310 3.2915 0.0099 29 1 4.4096 5.5081 0.5436 30 1 3.1214 6.2280 1.6025 31 1 4.8791 6.8793 -1.5826 32 1 4.7337 8.1221 -0.3166 33 1 4.5950 10.4179 -1.3977 34 1 3.4075 11.4526 -3.4981 35 1 2.1490 9.4831 -4.7833 36 1 1.6617 5.7789 -1.9105 37 1 3.3809 5.1919 -1.9340 38 1 4.5890 1.2110 0.0126 39 1 5.4399 -1.4429 -0.8270 40 1 4.9785 -1.7225 2.0258 41 1 5.3133 -4.3690 -0.1428 42 1 3.2435 -3.7427 0.9712 43 1 1.9734 -2.0073 -0.0050 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:38:04 Heat of formation + Delta-G solvation = 83.727824 kcal Electronic energy + Delta-G solvation = -25614.746081 eV Core-core repulsion = 21857.916729 eV Total energy + Delta-G solvation = -3756.829353 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.49510 -41.98066 -40.74096 -39.05936 -37.95028 -34.98950 -33.52083 -32.81702 -31.98390 -30.86633 -29.04551 -28.45077 -26.70899 -25.82221 -24.40518 -22.80283 -21.86602 -21.65871 -21.25574 -21.12242 -20.12774 -18.80089 -18.21825 -17.78312 -17.10705 -16.89201 -16.64576 -16.38409 -15.83537 -15.72057 -15.36100 -15.19458 -14.99224 -14.71399 -14.57179 -14.47164 -14.00996 -13.89392 -13.85155 -13.53853 -13.49977 -13.41389 -13.33715 -12.91296 -12.80618 -12.63614 -12.20948 -12.15421 -11.81476 -11.50763 -11.31007 -10.92196 -10.54006 -10.23501 -9.97606 -9.76310 -9.41694 -9.15454 -5.24764 0.78779 0.98134 1.07931 1.23994 1.28317 1.64699 1.68920 1.99370 2.06360 2.49086 2.66867 3.17923 3.30311 3.45868 3.57276 3.66389 3.80729 3.82960 3.99528 4.02334 4.09222 4.18111 4.19272 4.28959 4.33704 4.38615 4.49322 4.65726 4.70160 4.70763 4.74339 4.78456 4.80656 4.94478 5.00356 5.02574 5.18490 5.20491 5.21492 5.35081 5.67171 5.72597 5.84111 5.86304 6.16790 6.22075 6.32028 6.74307 6.89877 7.51270 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C 0.124 3.876 3 C -0.241 4.241 4 C 0.594 3.406 5 O -0.548 6.548 6 N -0.717 5.717 7 C 0.125 3.875 8 H 0.116 0.884 9 C -0.138 4.138 10 C -0.119 4.119 11 H 0.099 0.901 12 C 0.145 3.855 13 N -0.372 5.372 14 C 0.050 3.950 15 C -0.275 4.275 16 C 0.041 3.959 17 N -0.288 5.288 18 C -0.132 4.132 19 C -0.127 4.127 20 C -0.028 4.028 21 C -0.040 4.040 22 O -0.523 6.523 23 Si 0.670 3.330 24 N -0.546 5.546 25 H 0.083 0.917 26 H 0.065 0.935 27 H 0.103 0.897 28 H 0.400 0.600 29 H 0.090 0.910 30 H 0.080 0.920 31 H 0.086 0.914 32 H 0.097 0.903 33 H 0.172 0.828 34 H 0.146 0.854 35 H 0.182 0.818 36 H 0.076 0.924 37 H 0.085 0.915 38 H 0.146 0.854 39 H 0.130 0.870 40 H 0.377 0.623 41 H -0.246 1.246 42 H -0.256 1.256 43 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.286 -1.210 0.608 2.657 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.006 3.994 3 C -0.251 4.251 4 C 0.384 3.616 5 O -0.427 6.427 6 N -0.367 5.367 7 C 0.020 3.980 8 H 0.134 0.866 9 C -0.177 4.177 10 C -0.139 4.139 11 H 0.117 0.883 12 C 0.023 3.977 13 N -0.154 5.154 14 C -0.096 4.096 15 C -0.304 4.304 16 C -0.145 4.145 17 N -0.110 5.110 18 C -0.171 4.171 19 C -0.152 4.152 20 C -0.135 4.135 21 C -0.151 4.151 22 O -0.328 6.328 23 Si 0.570 3.430 24 N -0.145 5.145 25 H 0.101 0.899 26 H 0.084 0.916 27 H 0.122 0.878 28 H 0.235 0.765 29 H 0.108 0.892 30 H 0.098 0.902 31 H 0.104 0.896 32 H 0.116 0.884 33 H 0.189 0.811 34 H 0.164 0.836 35 H 0.199 0.801 36 H 0.095 0.905 37 H 0.104 0.896 38 H 0.164 0.836 39 H 0.147 0.853 40 H 0.225 0.775 41 H -0.169 1.169 42 H -0.181 1.181 43 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges 1.721 -3.167 0.733 3.679 hybrid contribution 0.812 0.884 1.073 1.610 sum 2.533 -2.283 1.806 3.859 Atomic orbital electron populations 1.20655 0.86540 1.04498 1.03987 1.20419 0.93799 0.85265 0.99946 1.20121 0.93028 0.92074 1.19855 1.17349 0.85314 0.84067 0.74900 1.90752 1.16632 1.84367 1.50956 1.45712 1.09633 1.05411 1.75934 1.22483 0.99509 0.79038 0.96972 0.86643 1.23376 0.99941 0.95793 0.98590 1.22627 0.98047 0.96000 0.97197 0.88306 1.21744 0.96129 0.91179 0.88611 1.48743 1.39710 1.06233 1.20753 1.22603 1.01538 0.84988 1.00514 1.21553 1.08392 1.01080 0.99416 1.23949 1.00038 0.90336 1.00203 1.77404 1.12434 1.23503 0.97619 1.23459 1.02771 0.94277 0.96626 1.21783 0.95660 0.92570 1.05175 1.20459 0.84327 0.95630 1.13132 1.24378 0.93480 1.07003 0.90280 1.86655 1.40204 1.90808 1.15179 0.95508 0.83343 0.75080 0.89050 1.41735 1.05591 1.08503 1.58683 0.89872 0.91561 0.87808 0.76533 0.89180 0.90157 0.89608 0.88430 0.81081 0.83601 0.80123 0.90492 0.89628 0.83611 0.85269 0.77498 1.16926 1.18102 0.74761 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.00 9.88 36.00 0.36 0.35 16 2 C 0.12 0.13 7.18 -81.88 -0.59 -0.46 16 3 C -0.24 -0.51 6.29 -103.35 -0.65 -1.16 16 4 C 0.59 2.06 7.81 -12.59 -0.10 1.96 16 5 O -0.55 -3.57 14.41 5.25 0.08 -3.49 16 6 N -0.72 -0.47 5.36 -54.05 -0.29 -0.76 16 7 C 0.13 0.05 4.24 -67.03 -0.28 -0.24 16 8 H 0.12 0.26 7.46 -51.92 -0.39 -0.13 16 9 C -0.14 0.31 7.39 -25.92 -0.19 0.12 16 10 C -0.12 0.12 3.82 -89.81 -0.34 -0.22 16 11 H 0.10 0.02 8.14 -51.93 -0.42 -0.40 16 12 C 0.14 -0.20 6.33 -4.05 -0.03 -0.23 16 13 N -0.37 -0.58 3.68 -61.37 -0.23 -0.80 16 14 C 0.05 0.03 11.45 -17.22 -0.20 -0.17 16 15 C -0.27 -0.36 10.80 -40.01 -0.43 -0.79 16 16 C 0.04 0.10 12.03 -17.36 -0.21 -0.11 16 17 N -0.29 -1.10 12.42 30.62 0.38 -0.72 16 18 C -0.13 -0.08 7.45 -25.82 -0.19 -0.27 16 19 C -0.13 -0.06 10.45 -37.50 -0.39 -0.45 16 20 C -0.03 0.02 6.09 -81.86 -0.50 -0.48 16 21 C -0.04 0.07 2.98 36.01 0.11 0.17 16 22 O -0.52 0.08 12.88 -35.23 -0.45 -0.38 16 23 Si 0.67 -1.74 30.96 -169.99 -5.26 -7.00 16 24 N -0.55 0.58 5.41 -5.42 -0.03 0.55 16 25 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 26 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 27 H 0.10 0.22 6.47 -51.93 -0.34 -0.12 16 28 H 0.40 -0.62 7.85 -40.82 -0.32 -0.94 16 29 H 0.09 -0.33 8.08 -51.93 -0.42 -0.75 16 30 H 0.08 -0.20 8.14 -51.92 -0.42 -0.62 16 31 H 0.09 -0.15 7.87 -51.93 -0.41 -0.56 16 32 H 0.10 -0.37 8.07 -51.93 -0.42 -0.79 16 33 H 0.17 -0.48 8.06 -52.49 -0.42 -0.90 16 34 H 0.15 -0.07 8.06 -52.48 -0.42 -0.49 16 35 H 0.18 -0.02 8.06 -52.49 -0.42 -0.45 16 36 H 0.08 0.22 8.14 -51.93 -0.42 -0.20 16 37 H 0.09 0.05 7.92 -51.93 -0.41 -0.36 16 38 H 0.15 -0.16 7.70 -52.49 -0.40 -0.57 16 39 H 0.13 -0.32 7.96 -51.93 -0.41 -0.73 16 40 H 0.38 -1.02 8.70 45.56 0.40 -0.63 16 41 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 42 H -0.26 0.24 7.11 56.52 0.40 0.64 16 43 H 0.41 -1.41 6.72 -40.82 -0.27 -1.69 16 LS Contribution 363.20 15.07 5.47 5.47 Total: 0.00 -9.67 363.20 -9.95 -19.62 By element: Atomic # 1 Polarization: -4.52 SS G_CDS: -5.98 Total: -10.50 kcal Atomic # 6 Polarization: 1.66 SS G_CDS: -3.64 Total: -1.98 kcal Atomic # 7 Polarization: -1.57 SS G_CDS: -0.16 Total: -1.73 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -0.38 Total: -3.87 kcal Atomic # 14 Polarization: -1.74 SS G_CDS: -5.26 Total: -7.00 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -9.67 -9.95 -19.62 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.344 kcal (2) G-P(sol) polarization free energy of solvation -9.668 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 93.676 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.948 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.616 kcal (6) G-S(sol) free energy of system = (1) + (5) 83.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds