Wall clock time and date at job start Sun Mar 7 2021 04:33:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.35535 * 125.67532 * 2 1 4 4 C 1.35457 * 108.86749 * 179.86546 * 3 2 1 5 5 C 1.50696 * 126.06250 * 180.11951 * 4 3 2 6 6 O 1.42908 * 109.47074 * 245.32119 * 5 4 3 7 7 Si 1.86300 * 109.47605 * 5.31859 * 5 4 3 8 8 C 1.39832 * 107.86842 * 0.39109 * 4 3 2 9 9 C 1.37653 * 125.68042 * 180.29861 * 2 1 3 10 10 C 1.46676 * 126.23065 * 359.95236 * 9 2 1 11 11 O 1.21696 * 120.00433 * 5.04101 * 10 9 2 12 12 N 1.34778 * 119.99964 * 185.04505 * 10 9 2 13 13 C 1.46494 * 120.00272 * 185.08031 * 12 10 9 14 14 H 1.09002 * 112.84820 * 336.19273 * 13 12 10 15 15 C 1.53779 * 113.61794 * 107.50061 * 13 12 10 16 16 C 1.53781 * 87.08039 * 89.11932 * 15 13 12 17 17 H 1.09005 * 113.61098 * 270.88407 * 16 15 13 18 18 C 1.52998 * 113.61443 * 139.98614 * 16 15 13 19 19 N 1.46499 * 109.47189 * 87.49974 * 18 16 15 20 20 C 1.34944 * 126.03539 * 124.71535 * 19 18 16 21 21 C 1.35324 * 107.74788 * 179.83787 * 20 19 18 22 22 C 1.39870 * 107.91611 * 0.42665 * 21 20 19 23 23 N 1.30842 * 108.20055 * 359.73232 * 22 21 20 24 24 C 1.53776 * 87.08382 * 25.43378 * 16 15 13 25 25 H 1.08998 * 109.47657 * 264.14353 * 1 2 3 26 26 H 1.09011 * 109.47131 * 144.14652 * 1 2 3 27 27 H 1.09004 * 109.47482 * 24.14629 * 1 2 3 28 28 H 1.07996 * 125.56630 * 0.02562 * 3 2 1 29 29 H 1.08999 * 109.47341 * 125.32383 * 5 4 3 30 30 H 0.96698 * 113.99602 * 59.99866 * 6 5 4 31 31 H 1.48499 * 110.00387 * 180.02562 * 7 5 4 32 32 H 1.48505 * 109.99908 * 301.32249 * 7 5 4 33 33 H 1.07990 * 126.45834 * 179.76260 * 8 4 3 34 34 H 0.97004 * 119.99693 * 5.07576 * 12 10 9 35 35 H 1.09005 * 113.61886 * 203.66744 * 15 13 12 36 36 H 1.09000 * 113.61363 * 334.56768 * 15 13 12 37 37 H 1.08999 * 109.46885 * 207.49896 * 18 16 15 38 38 H 1.08996 * 109.46948 * 327.49921 * 18 16 15 39 39 H 1.07997 * 126.13145 * 0.02562 * 20 19 18 40 40 H 1.07996 * 126.04571 * 180.16164 * 21 20 19 41 41 H 1.07999 * 125.90157 * 179.71965 * 22 21 20 42 42 H 1.08991 * 113.61760 * 220.02160 * 24 16 15 43 43 H 1.08996 * 113.69056 * 89.12680 * 24 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5521 0.7093 0.0030 5 6 4.7535 1.6190 0.0066 6 8 5.4760 1.4587 -1.2160 7 14 4.1927 3.3881 0.1691 8 6 3.5780 -0.6887 -0.0041 9 6 2.2678 -1.1181 -0.0058 10 6 1.8124 -2.5124 -0.0121 11 8 0.6255 -2.7645 -0.1051 12 7 2.7085 -3.5144 0.0852 13 6 2.2667 -4.9062 -0.0328 14 1 1.2134 -5.0383 0.2145 15 6 2.6793 -5.5735 -1.3553 16 6 3.9797 -5.9904 -0.6482 17 1 4.7768 -5.2513 -0.7288 18 6 4.4422 -7.4057 -1.0003 19 7 5.2767 -7.3616 -2.2036 20 6 6.5324 -7.8426 -2.3168 21 6 6.9503 -7.6107 -3.5829 22 6 5.9180 -6.9572 -4.2638 23 7 4.9143 -6.8074 -3.4380 24 6 3.1954 -5.9092 0.6720 25 1 -0.3634 -0.1049 1.0222 26 1 -0.3634 -0.8330 -0.6020 27 1 -0.3634 0.9378 -0.4204 28 1 1.9081 2.1236 0.0004 29 1 5.3998 1.3640 0.8465 30 1 4.9613 1.6688 -2.0073 31 1 5.3683 4.2953 0.1733 32 1 3.2854 3.7384 -0.9531 33 1 4.4583 -1.3143 -0.0075 34 1 3.6460 -3.3140 0.2333 35 1 2.0459 -6.4150 -1.6361 36 1 2.8330 -4.8674 -2.1714 37 1 5.0202 -7.8156 -0.1721 38 1 3.5728 -8.0369 -1.1840 39 1 7.1009 -8.3285 -1.5377 40 1 7.9125 -7.8787 -3.9936 41 1 5.9449 -6.6321 -5.2934 42 1 3.7656 -5.4740 1.4926 43 1 2.7026 -6.8418 0.9468 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:02 Heat of formation + Delta-G solvation = 97.342828 kcal Electronic energy + Delta-G solvation = -26016.977868 eV Core-core repulsion = 22260.738907 eV Total energy + Delta-G solvation = -3756.238962 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.57231 -42.02919 -40.96165 -39.16340 -37.78306 -35.19838 -34.03168 -33.35188 -31.04412 -30.73675 -28.63378 -28.25062 -26.81279 -25.77376 -24.75987 -23.49200 -21.90391 -21.59502 -21.33630 -20.58478 -20.23170 -18.89288 -18.20544 -17.77065 -17.05611 -16.83250 -16.70737 -16.34402 -16.00670 -15.79346 -15.56193 -15.36014 -15.09801 -14.87725 -14.84333 -14.41614 -14.36021 -14.01082 -13.76448 -13.61043 -13.51616 -13.45820 -13.32807 -13.16907 -12.89760 -12.37549 -12.29098 -11.76701 -11.71226 -11.53792 -11.31678 -11.06343 -10.44122 -10.27555 -10.12279 -9.71224 -9.45065 -9.27427 -4.93998 0.43645 1.04277 1.33527 1.53082 1.53774 1.61232 1.62797 2.00738 2.02705 2.26487 2.35514 3.21996 3.35047 3.49635 3.56388 3.63433 3.74373 3.77254 3.90615 3.94788 3.97817 4.08452 4.17126 4.26043 4.27458 4.33492 4.34884 4.55265 4.61985 4.63410 4.69954 4.71988 4.75393 4.76517 4.89169 4.95358 5.05169 5.08367 5.16737 5.17439 5.49329 5.66941 5.80372 5.88600 6.10726 6.13103 6.43475 6.52699 6.85976 7.16075 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.404 5.404 3 C 0.028 3.972 4 C -0.205 4.205 5 C -0.038 4.038 6 O -0.532 6.532 7 Si 0.681 3.319 8 C -0.112 4.112 9 C -0.054 4.054 10 C 0.595 3.405 11 O -0.545 6.545 12 N -0.702 5.702 13 C 0.121 3.879 14 H 0.108 0.892 15 C -0.134 4.134 16 C -0.122 4.122 17 H 0.095 0.905 18 C 0.142 3.858 19 N -0.372 5.372 20 C 0.050 3.950 21 C -0.275 4.275 22 C 0.041 3.959 23 N -0.289 5.289 24 C -0.137 4.137 25 H 0.080 0.920 26 H 0.102 0.898 27 H 0.086 0.914 28 H 0.173 0.827 29 H 0.114 0.886 30 H 0.374 0.626 31 H -0.258 1.258 32 H -0.261 1.261 33 H 0.144 0.856 34 H 0.403 0.597 35 H 0.093 0.907 36 H 0.076 0.924 37 H 0.098 0.902 38 H 0.087 0.913 39 H 0.172 0.828 40 H 0.146 0.854 41 H 0.181 0.819 42 H 0.079 0.921 43 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.595 -0.662 3.980 4.078 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.075 5.075 3 C -0.109 4.109 4 C -0.212 4.212 5 C -0.149 4.149 6 O -0.338 6.338 7 Si 0.582 3.418 8 C -0.138 4.138 9 C -0.167 4.167 10 C 0.384 3.616 11 O -0.424 6.424 12 N -0.352 5.352 13 C 0.015 3.985 14 H 0.126 0.874 15 C -0.173 4.173 16 C -0.141 4.141 17 H 0.113 0.887 18 C 0.021 3.979 19 N -0.154 5.154 20 C -0.096 4.096 21 C -0.304 4.304 22 C -0.145 4.145 23 N -0.111 5.111 24 C -0.176 4.176 25 H 0.099 0.901 26 H 0.121 0.879 27 H 0.105 0.895 28 H 0.190 0.810 29 H 0.132 0.868 30 H 0.222 0.778 31 H -0.183 1.183 32 H -0.185 1.185 33 H 0.162 0.838 34 H 0.239 0.761 35 H 0.112 0.888 36 H 0.095 0.905 37 H 0.116 0.884 38 H 0.106 0.894 39 H 0.189 0.811 40 H 0.164 0.836 41 H 0.198 0.802 42 H 0.098 0.902 43 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -1.500 0.170 4.232 4.493 hybrid contribution 1.551 -0.643 -1.227 2.080 sum 0.051 -0.474 3.005 3.043 Atomic orbital electron populations 1.22344 0.75478 1.05175 1.04636 1.43813 1.07031 1.04686 1.52002 1.21903 0.90135 0.91714 1.07159 1.19721 0.93669 0.94766 1.13019 1.24284 0.93549 1.07680 0.89345 1.86590 1.41715 1.89963 1.15529 0.95332 0.82181 0.74850 0.89450 1.21181 0.94248 0.94643 1.03736 1.19986 0.90284 0.87535 1.18882 1.16936 0.85478 0.83471 0.75763 1.90806 1.16134 1.84818 1.50606 1.45262 1.11150 1.05016 1.73809 1.21846 1.00025 0.79663 0.96920 0.87383 1.23416 0.95742 1.00993 0.97122 1.22906 0.97990 0.96185 0.96988 0.88664 1.21787 0.95084 0.97976 0.83085 1.48741 1.11563 1.45191 1.09940 1.22604 0.87115 1.00512 0.99400 1.21557 1.02615 1.11874 0.94362 1.23946 0.91555 0.99013 0.99975 1.77397 1.23595 1.19802 0.90281 1.23354 0.97787 1.00048 0.96407 0.90096 0.87942 0.89507 0.80976 0.86775 0.77823 1.18269 1.18541 0.83822 0.76124 0.88841 0.90523 0.88407 0.89445 0.81067 0.83589 0.80155 0.90196 0.88026 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.04 10.49 59.84 0.63 0.59 16 2 N -0.40 -0.48 3.16 -120.23 -0.38 -0.86 16 3 C 0.03 0.00 9.92 -16.91 -0.17 -0.17 16 4 C -0.21 -0.11 5.43 -105.02 -0.57 -0.68 16 5 C -0.04 0.00 3.02 36.00 0.11 0.11 16 6 O -0.53 -0.91 12.88 -35.23 -0.45 -1.36 16 7 Si 0.68 -0.76 30.60 -169.99 -5.20 -5.96 16 8 C -0.11 -0.12 10.28 -39.12 -0.40 -0.52 16 9 C -0.05 -0.11 6.89 -81.98 -0.56 -0.68 16 10 C 0.59 1.67 7.77 -12.85 -0.10 1.57 16 11 O -0.54 -3.04 14.35 5.19 0.07 -2.96 16 12 N -0.70 -0.05 5.24 -54.32 -0.28 -0.33 16 13 C 0.12 -0.06 4.36 -67.12 -0.29 -0.36 16 14 H 0.11 0.10 7.41 -51.93 -0.39 -0.28 16 15 C -0.13 0.02 7.43 -25.92 -0.19 -0.17 16 16 C -0.12 0.23 3.70 -89.81 -0.33 -0.10 16 17 H 0.10 -0.08 8.14 -51.93 -0.42 -0.51 16 18 C 0.14 -0.27 6.35 -4.04 -0.03 -0.29 16 19 N -0.37 -0.43 3.68 -61.37 -0.23 -0.65 16 20 C 0.05 0.01 11.45 -17.22 -0.20 -0.18 16 21 C -0.27 -0.31 10.80 -40.01 -0.43 -0.74 16 22 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 23 N -0.29 -1.02 12.42 30.63 0.38 -0.64 16 24 C -0.14 0.43 7.39 -25.92 -0.19 0.24 16 25 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 26 H 0.10 0.12 6.54 -51.92 -0.34 -0.22 16 27 H 0.09 -0.26 8.12 -51.93 -0.42 -0.68 16 28 H 0.17 -0.47 6.21 -52.49 -0.33 -0.79 16 29 H 0.11 -0.08 7.96 -51.93 -0.41 -0.49 16 30 H 0.37 -0.32 8.70 45.56 0.40 0.07 16 31 H -0.26 -0.62 7.11 56.52 0.40 -0.21 16 32 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 33 H 0.14 -0.06 7.49 -52.49 -0.39 -0.45 16 34 H 0.40 -0.72 7.64 -40.82 -0.31 -1.03 16 35 H 0.09 -0.03 7.90 -51.93 -0.41 -0.44 16 36 H 0.08 0.17 8.14 -51.93 -0.42 -0.25 16 37 H 0.10 -0.42 8.07 -51.93 -0.42 -0.84 16 38 H 0.09 -0.19 7.84 -51.93 -0.41 -0.59 16 39 H 0.17 -0.52 8.06 -52.49 -0.42 -0.94 16 40 H 0.15 -0.09 8.06 -52.49 -0.42 -0.51 16 41 H 0.18 -0.04 8.06 -52.49 -0.42 -0.46 16 42 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 43 H 0.10 -0.43 8.10 -51.93 -0.42 -0.85 16 LS Contribution 362.58 15.07 5.46 5.46 Total: 0.00 -9.71 362.58 -9.58 -19.29 By element: Atomic # 1 Polarization: -4.47 SS G_CDS: -6.01 Total: -10.48 kcal Atomic # 6 Polarization: 1.44 SS G_CDS: -2.94 Total: -1.50 kcal Atomic # 7 Polarization: -1.97 SS G_CDS: -0.51 Total: -2.48 kcal Atomic # 8 Polarization: -3.94 SS G_CDS: -0.38 Total: -4.32 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.20 Total: -5.96 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -9.71 -9.58 -19.29 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.629 kcal (2) G-P(sol) polarization free energy of solvation -9.709 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 106.920 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.577 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.286 kcal (6) G-S(sol) free energy of system = (1) + (5) 97.343 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds