Wall clock time and date at job start Sun Mar 7 2021 04:33:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37650 * 125.67929 * 2 1 4 4 C 1.46678 * 126.22898 * 359.97438 * 3 2 1 5 5 O 1.21687 * 120.00519 * 5.26611 * 4 3 2 6 6 N 1.34780 * 119.99662 * 185.26479 * 4 3 2 7 7 C 1.46498 * 120.00189 * 174.75119 * 6 4 3 8 8 H 1.09005 * 112.90732 * 336.24686 * 7 6 4 9 9 C 1.53774 * 113.61810 * 107.49790 * 7 6 4 10 10 C 1.53784 * 87.08006 * 89.11950 * 9 7 6 11 11 H 1.09003 * 113.68925 * 270.87492 * 10 9 7 12 12 C 1.53002 * 113.61525 * 139.98203 * 10 9 7 13 13 N 1.46502 * 109.46839 * 87.50178 * 12 10 9 14 14 C 1.34954 * 126.03417 * 125.00478 * 13 12 10 15 15 C 1.35307 * 107.74402 * 180.02562 * 14 13 12 16 16 C 1.39872 * 107.92296 * 359.97438 * 15 14 13 17 17 N 1.30833 * 108.19874 * 0.02562 * 16 15 14 18 18 C 1.53776 * 87.07990 * 25.43354 * 10 9 7 19 19 C 1.37868 * 107.53509 * 180.24221 * 3 2 1 20 20 C 1.39843 * 107.08205 * 359.58508 * 19 3 2 21 21 C 1.35452 * 107.86343 * 0.42047 * 20 19 3 22 22 C 1.50697 * 125.55997 * 179.76365 * 21 20 19 23 23 O 1.42900 * 109.47020 * 209.96872 * 22 21 20 24 24 Si 1.86303 * 109.47226 * 329.97100 * 22 21 20 25 25 H 1.08997 * 109.47488 * 94.12935 * 1 2 3 26 26 H 1.09008 * 109.47351 * 214.13409 * 1 2 3 27 27 H 1.09006 * 109.47100 * 334.13384 * 1 2 3 28 28 H 0.97000 * 119.99729 * 354.74701 * 6 4 3 29 29 H 1.09000 * 113.61504 * 334.57239 * 9 7 6 30 30 H 1.09006 * 113.61569 * 203.66220 * 9 7 6 31 31 H 1.08994 * 109.47052 * 327.50143 * 12 10 9 32 32 H 1.08997 * 109.47146 * 207.50044 * 12 10 9 33 33 H 1.08004 * 126.12724 * 0.02562 * 14 13 12 34 34 H 1.08001 * 126.03938 * 179.97438 * 15 14 13 35 35 H 1.07999 * 125.90116 * 180.02562 * 16 15 14 36 36 H 1.09000 * 113.61966 * 89.12194 * 18 10 9 37 37 H 1.09000 * 113.61419 * 219.93626 * 18 10 9 38 38 H 1.07995 * 126.45814 * 179.73891 * 19 3 2 39 39 H 1.07995 * 126.06436 * 180.15770 * 20 19 3 40 40 H 1.08999 * 109.47431 * 89.96912 * 22 21 20 41 41 H 0.96701 * 113.99853 * 60.00487 * 23 22 21 42 42 H 1.48492 * 109.99961 * 58.68443 * 24 22 21 43 43 H 1.48508 * 109.99811 * 180.02562 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8123 2.5124 -0.0005 5 8 0.6259 2.7650 0.0957 6 7 2.7080 3.5138 -0.1076 7 6 2.2471 4.8995 -0.2239 8 1 1.2339 4.9779 -0.6182 9 6 2.4803 5.7350 1.0458 10 6 3.8594 6.0890 0.4647 11 1 4.6442 5.3840 0.7390 12 6 4.2644 7.5468 0.6918 13 7 4.9353 7.6710 1.9882 14 6 6.1608 8.1946 2.2010 15 6 6.4140 8.1254 3.5284 16 6 5.3051 7.5400 4.1482 17 7 4.4183 7.2671 3.2258 18 6 3.2540 5.8270 -0.9244 19 6 3.5779 0.6888 -0.0056 20 6 3.5521 -0.7094 0.0008 21 6 2.2554 -1.1009 0.0004 22 6 1.7708 -2.5279 0.0010 23 8 0.5128 -2.6040 -0.6725 24 14 3.0114 -3.6055 -0.8767 25 1 -0.3634 -0.0740 -1.0249 26 1 -0.3634 -0.8507 0.5767 27 1 -0.3633 0.9248 0.4484 28 1 3.6578 3.3170 -0.1075 29 1 2.5303 5.1395 1.9573 30 1 1.8111 6.5910 1.1343 31 1 3.3750 8.1768 0.6811 32 1 4.9431 7.8630 -0.1003 33 1 6.8211 8.5968 1.4469 34 1 7.3135 8.4626 4.0221 35 1 5.1993 7.3467 5.2054 36 1 2.7965 6.7079 -1.3745 37 1 3.9292 5.3069 -1.6039 38 1 4.4583 1.3144 -0.0110 39 1 4.4131 -1.3612 0.0011 40 1 1.6540 -2.8715 1.0288 41 1 0.5419 -2.3130 -1.5942 42 1 4.3322 -3.5103 -0.2047 43 1 2.5448 -5.0153 -0.8835 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:06 Heat of formation + Delta-G solvation = 96.914475 kcal Electronic energy + Delta-G solvation = -25997.728257 eV Core-core repulsion = 22241.470720 eV Total energy + Delta-G solvation = -3756.257537 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.59430 -42.04085 -40.97779 -39.18057 -37.78114 -35.19700 -33.93530 -33.30841 -31.34660 -30.89209 -28.68130 -27.44370 -26.82821 -26.77767 -24.33731 -23.20719 -21.91516 -21.63814 -21.58454 -20.48165 -20.27227 -18.88286 -18.29418 -18.02114 -17.15593 -16.90101 -16.57841 -16.10030 -16.01658 -15.82444 -15.40419 -15.22565 -14.88893 -14.86751 -14.78442 -14.49420 -14.36855 -14.36139 -13.78797 -13.69580 -13.60843 -13.47724 -13.22539 -12.98695 -12.90292 -12.29744 -12.23833 -12.01494 -11.70317 -11.54533 -11.31891 -11.02104 -10.71722 -10.28508 -10.12075 -9.74059 -9.46212 -9.08717 -5.05375 0.41865 1.03319 1.09639 1.49789 1.60174 1.68200 1.68625 1.96242 2.01638 2.34449 2.38776 3.20156 3.21822 3.34577 3.53194 3.56699 3.67714 3.75754 3.94127 3.97107 3.99944 4.07802 4.25608 4.30360 4.32898 4.35413 4.42895 4.50947 4.54488 4.62391 4.69465 4.74197 4.82336 4.88631 4.94774 4.98756 5.05914 5.09623 5.15079 5.16349 5.51036 5.71059 5.79347 5.98358 6.12141 6.14487 6.34822 6.45857 6.85086 7.18009 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.390 5.390 3 C -0.052 4.052 4 C 0.595 3.405 5 O -0.543 6.543 6 N -0.702 5.702 7 C 0.123 3.877 8 H 0.106 0.894 9 C -0.134 4.134 10 C -0.122 4.122 11 H 0.095 0.905 12 C 0.142 3.858 13 N -0.372 5.372 14 C 0.050 3.950 15 C -0.275 4.275 16 C 0.041 3.959 17 N -0.289 5.289 18 C -0.137 4.137 19 C -0.134 4.134 20 C -0.205 4.205 21 C 0.016 3.984 22 C -0.050 4.050 23 O -0.543 6.543 24 Si 0.723 3.277 25 H 0.076 0.924 26 H 0.091 0.909 27 H 0.103 0.897 28 H 0.403 0.597 29 H 0.076 0.924 30 H 0.093 0.907 31 H 0.087 0.913 32 H 0.098 0.902 33 H 0.172 0.828 34 H 0.146 0.854 35 H 0.182 0.818 36 H 0.101 0.899 37 H 0.080 0.920 38 H 0.145 0.855 39 H 0.147 0.853 40 H 0.119 0.881 41 H 0.380 0.620 42 H -0.252 1.252 43 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.317 1.346 -4.873 6.648 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.062 5.062 3 C -0.166 4.166 4 C 0.383 3.617 5 O -0.422 6.422 6 N -0.353 5.353 7 C 0.017 3.983 8 H 0.124 0.876 9 C -0.172 4.172 10 C -0.141 4.141 11 H 0.113 0.887 12 C 0.021 3.979 13 N -0.155 5.155 14 C -0.096 4.096 15 C -0.304 4.304 16 C -0.145 4.145 17 N -0.110 5.110 18 C -0.176 4.176 19 C -0.161 4.161 20 C -0.229 4.229 21 C -0.102 4.102 22 C -0.161 4.161 23 O -0.348 6.348 24 Si 0.623 3.377 25 H 0.095 0.905 26 H 0.110 0.890 27 H 0.121 0.879 28 H 0.238 0.762 29 H 0.095 0.905 30 H 0.111 0.889 31 H 0.105 0.895 32 H 0.116 0.884 33 H 0.189 0.811 34 H 0.164 0.836 35 H 0.198 0.802 36 H 0.120 0.880 37 H 0.098 0.902 38 H 0.162 0.838 39 H 0.165 0.835 40 H 0.136 0.864 41 H 0.228 0.772 42 H -0.176 1.176 43 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges 2.161 0.163 -4.565 5.054 hybrid contribution 1.232 0.706 0.859 1.659 sum 3.393 0.869 -3.706 5.099 Atomic orbital electron populations 1.22417 0.75401 1.05826 1.04092 1.43749 1.07040 1.03967 1.51445 1.19977 0.90497 0.87415 1.18724 1.16949 0.85498 0.83468 0.75774 1.90792 1.16377 1.84717 1.50292 1.45260 1.09681 1.05403 1.74917 1.21826 0.99355 0.79759 0.97338 0.87555 1.23406 0.95524 1.00155 0.98160 1.22907 0.98418 0.95605 0.97154 0.88693 1.21791 0.98388 0.97627 0.80139 1.48749 1.13023 1.46983 1.06697 1.22602 0.88578 0.99967 0.98492 1.21555 1.02512 1.13104 0.93244 1.23948 0.92251 0.98721 0.99602 1.77399 1.22686 1.22195 0.88755 1.23361 0.98330 1.00074 0.95822 1.21269 0.94348 0.95186 1.05255 1.20641 0.95093 0.95392 1.11756 1.21125 0.90935 0.89230 1.08933 1.24980 0.94156 0.94531 1.02383 1.86500 1.29981 1.89096 1.29233 0.94030 0.76363 0.77686 0.89669 0.90505 0.89002 0.87875 0.76162 0.90513 0.88877 0.89457 0.88407 0.81063 0.83590 0.80154 0.88030 0.90167 0.83755 0.83539 0.86366 0.77233 1.17638 1.17763 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.08 9.39 59.85 0.56 0.64 16 2 N -0.39 -0.83 3.16 -115.62 -0.37 -1.19 16 3 C -0.05 -0.12 6.88 -81.98 -0.56 -0.69 16 4 C 0.59 1.78 7.77 -12.85 -0.10 1.68 16 5 O -0.54 -3.26 14.21 5.20 0.07 -3.19 16 6 N -0.70 0.04 5.25 -54.33 -0.29 -0.25 16 7 C 0.12 -0.08 4.29 -67.12 -0.29 -0.36 16 8 H 0.11 0.09 7.53 -51.93 -0.39 -0.30 16 9 C -0.13 0.02 7.43 -25.92 -0.19 -0.18 16 10 C -0.12 0.25 3.70 -89.81 -0.33 -0.08 16 11 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 12 C 0.14 -0.29 6.35 -4.04 -0.03 -0.32 16 13 N -0.37 -0.37 3.68 -61.37 -0.23 -0.60 16 14 C 0.05 0.00 11.45 -17.22 -0.20 -0.19 16 15 C -0.27 -0.26 10.80 -40.01 -0.43 -0.69 16 16 C 0.04 0.09 12.03 -17.37 -0.21 -0.12 16 17 N -0.29 -0.99 12.42 30.62 0.38 -0.61 16 18 C -0.14 0.46 7.39 -25.92 -0.19 0.27 16 19 C -0.13 -0.09 10.36 -39.12 -0.41 -0.49 16 20 C -0.20 -0.14 9.37 -39.98 -0.37 -0.51 16 21 C 0.02 0.02 6.14 -81.96 -0.50 -0.49 16 22 C -0.05 0.03 2.90 36.00 0.10 0.13 16 23 O -0.54 0.35 10.48 -35.23 -0.37 -0.02 16 24 Si 0.72 -1.29 31.29 -169.99 -5.32 -6.61 16 25 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 26 H 0.09 0.08 7.07 -51.92 -0.37 -0.29 16 27 H 0.10 0.31 6.00 -51.93 -0.31 0.00 16 28 H 0.40 -0.87 7.60 -40.82 -0.31 -1.18 16 29 H 0.08 0.18 8.14 -51.93 -0.42 -0.24 16 30 H 0.09 -0.02 7.90 -51.93 -0.41 -0.43 16 31 H 0.09 -0.19 7.84 -51.93 -0.41 -0.60 16 32 H 0.10 -0.44 8.07 -51.93 -0.42 -0.86 16 33 H 0.17 -0.56 8.06 -52.48 -0.42 -0.98 16 34 H 0.15 -0.12 8.06 -52.49 -0.42 -0.54 16 35 H 0.18 -0.06 8.06 -52.49 -0.42 -0.48 16 36 H 0.10 -0.45 8.10 -51.93 -0.42 -0.87 16 37 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 38 H 0.14 -0.29 7.45 -52.49 -0.39 -0.68 16 39 H 0.15 -0.10 6.62 -52.49 -0.35 -0.45 16 40 H 0.12 -0.01 7.96 -51.93 -0.41 -0.43 16 41 H 0.38 -1.50 8.70 45.56 0.40 -1.11 16 42 H -0.25 -0.05 6.76 56.52 0.38 0.33 16 43 H -0.25 -0.31 7.11 56.52 0.40 0.10 16 LS Contribution 358.18 15.07 5.40 5.40 Total: 0.00 -9.35 358.18 -9.83 -19.18 By element: Atomic # 1 Polarization: -4.74 SS G_CDS: -5.97 Total: -10.71 kcal Atomic # 6 Polarization: 1.74 SS G_CDS: -3.15 Total: -1.41 kcal Atomic # 7 Polarization: -2.15 SS G_CDS: -0.50 Total: -2.65 kcal Atomic # 8 Polarization: -2.91 SS G_CDS: -0.30 Total: -3.20 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: -5.32 Total: -6.61 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -9.35 -9.83 -19.18 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.097 kcal (2) G-P(sol) polarization free energy of solvation -9.351 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 106.746 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.831 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.182 kcal (6) G-S(sol) free energy of system = (1) + (5) 96.914 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds