Wall clock time and date at job start Sun Mar 7 2021 04:33:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86303 * 109.46944 * 2 1 4 4 C 1.50702 * 109.47205 * 120.00210 * 2 1 3 5 5 C 1.36449 * 120.29611 * 119.95686 * 4 2 1 6 6 C 1.40096 * 119.25033 * 179.97438 * 5 4 2 7 7 C 1.40854 * 132.86261 * 180.02562 * 6 5 4 8 8 C 1.46571 * 126.58232 * 359.97438 * 7 6 5 9 9 O 1.21718 * 119.99538 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99979 * 179.97438 * 8 7 6 11 11 C 1.46500 * 119.99478 * 179.97438 * 10 8 7 12 12 H 1.08995 * 112.85653 * 336.19668 * 11 10 8 13 13 C 1.53789 * 113.61305 * 107.50470 * 11 10 8 14 14 C 1.53779 * 87.08028 * 89.11255 * 13 11 10 15 15 H 1.09003 * 113.69053 * 270.86894 * 14 13 11 16 16 C 1.53002 * 113.61394 * 139.98290 * 14 13 11 17 17 N 1.46506 * 109.47035 * 87.49742 * 16 14 13 18 18 C 1.34953 * 126.03318 * 124.71869 * 17 16 14 19 19 C 1.35318 * 107.74058 * 179.84044 * 18 17 16 20 20 C 1.39861 * 107.92377 * 0.42072 * 19 18 17 21 21 N 1.30842 * 108.20454 * 359.73714 * 20 19 18 22 22 C 1.53776 * 87.08338 * 25.43358 * 14 13 11 23 23 C 1.40551 * 106.84108 * 180.24814 * 7 6 5 24 24 N 1.30747 * 108.74408 * 359.58998 * 23 7 6 25 25 N 1.36570 * 120.23286 * 0.07425 * 6 5 4 26 26 C 1.36242 * 120.08282 * 359.95492 * 25 6 5 27 27 C 1.35191 * 120.70221 * 0.03418 * 26 25 6 28 28 H 0.96697 * 114.00071 * 59.99878 * 1 2 3 29 29 H 1.08996 * 109.47622 * 239.99922 * 2 1 3 30 30 H 1.48497 * 110.00030 * 298.67748 * 3 2 1 31 31 H 1.48505 * 109.99866 * 60.00362 * 3 2 1 32 32 H 1.07991 * 120.37327 * 0.04422 * 5 4 2 33 33 H 0.96995 * 120.00059 * 359.97438 * 10 8 7 34 34 H 1.08993 * 113.61043 * 334.56199 * 13 11 10 35 35 H 1.08991 * 113.61045 * 203.66136 * 13 11 10 36 36 H 1.09004 * 109.46930 * 327.49972 * 16 14 13 37 37 H 1.09000 * 109.47312 * 207.49916 * 16 14 13 38 38 H 1.08000 * 126.12606 * 359.97438 * 18 17 16 39 39 H 1.08004 * 126.03546 * 180.16152 * 19 18 17 40 40 H 1.07998 * 125.90240 * 179.71984 * 20 19 18 41 41 H 1.09001 * 113.61656 * 89.11737 * 22 14 13 42 42 H 1.09005 * 113.61189 * 220.01854 * 22 14 13 43 43 H 1.08005 * 125.63100 * 179.76752 * 23 7 6 44 44 H 1.07996 * 119.64628 * 180.02562 * 26 25 6 45 45 H 1.08002 * 119.83468 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.7154 -1.8209 1.1122 6 6 3.1708 -2.4638 2.2706 7 6 3.9746 -3.6009 2.4823 8 6 4.5742 -4.4513 1.4499 9 8 4.3936 -4.1987 0.2730 10 7 5.3255 -5.5128 1.8039 11 6 5.9243 -6.3629 0.7719 12 1 5.3917 -6.3148 -0.1778 13 6 7.4462 -6.1881 0.6364 14 6 7.5883 -7.2886 1.7010 15 1 7.5980 -6.9104 2.7233 16 6 8.7279 -8.2699 1.4198 17 7 9.9721 -7.7507 1.9932 18 6 10.7739 -8.3960 2.8661 19 6 11.8172 -7.5814 3.1475 20 6 11.6422 -6.3942 2.4292 21 7 10.5365 -6.4945 1.7369 22 6 6.2105 -7.7977 1.2456 23 6 4.0863 -3.7675 3.8734 24 7 3.4184 -2.8123 4.4659 25 7 2.8306 -1.9830 3.5028 26 6 2.0467 -0.8740 3.6106 27 6 1.5961 -0.2373 2.5064 28 1 -0.3933 0.4417 -0.7650 29 1 1.7924 -0.5138 -0.8899 30 1 1.5879 2.4585 -1.2242 31 1 1.5614 2.4679 1.2086 32 1 2.9829 -2.1991 0.1367 33 1 5.4697 -5.7138 2.7417 34 1 7.8046 -5.2129 0.9659 35 1 7.8331 -6.4741 -0.3416 36 1 8.8465 -8.3900 0.3429 37 1 8.4956 -9.2352 1.8696 38 1 10.6129 -9.3860 3.2665 39 1 12.6377 -7.8066 3.8128 40 1 12.3050 -5.5416 2.4438 41 1 6.2597 -8.5238 0.4341 42 1 5.5715 -8.1220 2.0670 43 1 4.6357 -4.5531 4.3710 44 1 1.7824 -0.4996 4.5885 45 1 0.9752 0.6405 2.6081 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_11618758.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:10 Heat of formation + Delta-G solvation = 155.445177 kcal Electronic energy + Delta-G solvation = -29964.252319 eV Core-core repulsion = 25760.428532 eV Total energy + Delta-G solvation = -4203.823787 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.148 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -43.24824 -42.01617 -40.97629 -39.39979 -38.93018 -37.40378 -34.92267 -34.23583 -33.32532 -32.12347 -30.92477 -30.28653 -28.52218 -27.26097 -26.72921 -25.16444 -24.30134 -23.49489 -22.90165 -21.88478 -21.55366 -21.24764 -20.25566 -19.21710 -18.59650 -18.15255 -17.90324 -17.49658 -16.96003 -16.82950 -16.71358 -16.37587 -15.91108 -15.80988 -15.61192 -15.46357 -15.13796 -14.84827 -14.65022 -14.50411 -14.32067 -14.08818 -14.06107 -13.70054 -13.55615 -13.41464 -13.26765 -13.01554 -12.82754 -12.72295 -12.23589 -12.09365 -11.90690 -11.63888 -11.52585 -11.50524 -11.24535 -10.84144 -10.73643 -10.27089 -10.25096 -9.94831 -9.43230 -8.72240 -5.06102 -0.53100 -0.07766 1.04195 1.06199 1.08119 1.13335 1.48420 1.63577 1.78924 2.04260 2.07343 2.24769 2.61047 2.97151 3.15019 3.27872 3.43075 3.45318 3.54828 3.62628 3.72669 3.79114 3.88100 3.97839 4.01240 4.03233 4.12562 4.17941 4.27022 4.29927 4.35430 4.38831 4.56235 4.62331 4.69560 4.74849 4.76946 4.86811 4.92752 5.01142 5.13494 5.15021 5.16792 5.18916 5.20576 5.30112 5.67550 5.69390 5.82204 6.15104 6.26665 6.35264 6.63882 6.87976 7.43074 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.077 4.077 3 Si 0.692 3.308 4 C -0.025 4.025 5 C -0.092 4.092 6 C 0.170 3.830 7 C -0.317 4.317 8 C 0.605 3.395 9 O -0.547 6.547 10 N -0.712 5.712 11 C 0.123 3.877 12 H 0.107 0.893 13 C -0.134 4.134 14 C -0.122 4.122 15 H 0.094 0.906 16 C 0.141 3.859 17 N -0.371 5.371 18 C 0.049 3.951 19 C -0.275 4.275 20 C 0.041 3.959 21 N -0.288 5.288 22 C -0.139 4.139 23 C 0.119 3.881 24 N -0.313 5.313 25 N -0.264 5.264 26 C 0.115 3.885 27 C -0.144 4.144 28 H 0.385 0.615 29 H 0.084 0.916 30 H -0.251 1.251 31 H -0.248 1.248 32 H 0.165 0.835 33 H 0.398 0.602 34 H 0.076 0.924 35 H 0.091 0.909 36 H 0.087 0.913 37 H 0.097 0.903 38 H 0.172 0.828 39 H 0.146 0.854 40 H 0.181 0.819 41 H 0.100 0.900 42 H 0.078 0.922 43 H 0.197 0.803 44 H 0.177 0.823 45 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.744 -1.224 0.797 1.639 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.186 4.186 3 Si 0.590 3.410 4 C -0.031 4.031 5 C -0.112 4.112 6 C 0.049 3.951 7 C -0.331 4.331 8 C 0.395 3.605 9 O -0.426 6.426 10 N -0.362 5.362 11 C 0.018 3.982 12 H 0.125 0.875 13 C -0.172 4.172 14 C -0.141 4.141 15 H 0.112 0.888 16 C 0.020 3.980 17 N -0.154 5.154 18 C -0.097 4.097 19 C -0.304 4.304 20 C -0.146 4.146 21 N -0.109 5.109 22 C -0.177 4.177 23 C -0.062 4.062 24 N -0.134 5.134 25 N -0.028 5.028 26 C -0.011 4.011 27 C -0.165 4.165 28 H 0.234 0.766 29 H 0.102 0.898 30 H -0.176 1.176 31 H -0.171 1.171 32 H 0.183 0.817 33 H 0.232 0.768 34 H 0.095 0.905 35 H 0.110 0.890 36 H 0.105 0.895 37 H 0.115 0.885 38 H 0.189 0.811 39 H 0.164 0.836 40 H 0.198 0.802 41 H 0.118 0.882 42 H 0.097 0.903 43 H 0.214 0.786 44 H 0.194 0.806 45 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -0.725 0.408 0.859 1.196 hybrid contribution -0.078 -1.174 0.048 1.177 sum -0.803 -0.765 0.907 1.433 Atomic orbital electron populations 1.86575 1.16979 1.80349 1.50108 1.24726 0.85026 1.11307 0.97496 0.94426 0.91747 0.73451 0.81331 1.19351 0.95425 0.94160 0.94135 1.20663 0.98438 0.93815 0.98246 1.19218 0.95613 0.94178 0.86104 1.19564 1.16330 1.03741 0.93497 1.16797 0.77055 0.79356 0.87308 1.90778 1.61656 1.71618 1.18540 1.45338 1.52503 1.28945 1.09458 1.21778 0.94176 0.89559 0.92703 0.87539 1.23402 0.95298 0.99574 0.98968 1.22901 0.93422 0.97069 1.00688 0.88763 1.21804 0.79785 0.96754 0.99630 1.48759 1.19482 1.12282 1.34857 1.22601 0.92742 0.99468 0.94875 1.21549 1.03044 0.95907 1.09949 1.23942 0.95486 0.99113 0.96023 1.77407 1.11236 0.98614 1.23692 1.23367 0.95524 0.96678 1.02175 1.24035 0.94399 0.95739 0.91986 1.77640 1.18650 1.06280 1.10786 1.46083 1.31996 1.18963 1.05801 1.21567 0.92353 0.85318 1.01843 1.20792 1.02762 1.02550 0.90421 0.76649 0.89766 1.17552 1.17144 0.81746 0.76820 0.90513 0.89018 0.89456 0.88490 0.81108 0.83631 0.80166 0.88200 0.90341 0.78641 0.80560 0.82295 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.09 12.76 -35.23 -0.45 -0.36 16 2 C -0.08 0.08 2.81 36.01 0.10 0.18 16 3 Si 0.69 -1.39 31.97 -169.99 -5.43 -6.83 16 4 C -0.03 -0.02 4.53 -104.55 -0.47 -0.49 16 5 C -0.09 -0.19 9.35 -39.53 -0.37 -0.56 16 6 C 0.17 0.57 6.76 -84.07 -0.57 0.00 16 7 C -0.32 -0.92 6.17 -104.68 -0.65 -1.56 16 8 C 0.61 1.99 7.78 -12.90 -0.10 1.89 16 9 O -0.55 -3.46 15.30 5.17 0.08 -3.38 16 10 N -0.71 -0.08 5.25 -54.35 -0.29 -0.37 16 11 C 0.12 -0.04 4.32 -67.11 -0.29 -0.33 16 12 H 0.11 0.14 7.46 -51.93 -0.39 -0.25 16 13 C -0.13 0.01 7.43 -25.92 -0.19 -0.18 16 14 C -0.12 0.24 3.70 -89.81 -0.33 -0.10 16 15 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 16 C 0.14 -0.27 6.35 -4.04 -0.03 -0.30 16 17 N -0.37 -0.38 3.68 -61.36 -0.23 -0.61 16 18 C 0.05 0.01 11.45 -17.22 -0.20 -0.19 16 19 C -0.27 -0.26 10.80 -40.02 -0.43 -0.69 16 20 C 0.04 0.08 12.03 -17.37 -0.21 -0.13 16 21 N -0.29 -0.96 12.42 30.62 0.38 -0.58 16 22 C -0.14 0.41 7.39 -25.92 -0.19 0.22 16 23 C 0.12 0.15 11.44 -17.14 -0.20 -0.05 16 24 N -0.31 -1.01 12.58 30.75 0.39 -0.63 16 25 N -0.26 -0.75 3.86 -10.55 -0.04 -0.79 16 26 C 0.12 0.04 11.18 -16.68 -0.19 -0.15 16 27 C -0.14 0.02 8.67 -39.95 -0.35 -0.33 16 28 H 0.38 -1.58 8.74 45.56 0.40 -1.18 16 29 H 0.08 -0.19 7.71 -51.93 -0.40 -0.59 16 30 H -0.25 0.03 7.11 56.52 0.40 0.43 16 31 H -0.25 -0.05 7.07 56.52 0.40 0.35 16 32 H 0.17 0.34 7.01 -52.49 -0.37 -0.03 16 33 H 0.40 -0.92 7.62 -40.82 -0.31 -1.23 16 34 H 0.08 0.17 8.14 -51.93 -0.42 -0.25 16 35 H 0.09 -0.01 7.90 -51.93 -0.41 -0.42 16 36 H 0.09 -0.18 7.84 -51.93 -0.41 -0.59 16 37 H 0.10 -0.41 8.07 -51.93 -0.42 -0.83 16 38 H 0.17 -0.54 8.06 -52.49 -0.42 -0.96 16 39 H 0.15 -0.11 8.06 -52.48 -0.42 -0.54 16 40 H 0.18 -0.08 8.06 -52.49 -0.42 -0.50 16 41 H 0.10 -0.40 8.10 -51.93 -0.42 -0.82 16 42 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 43 H 0.20 -0.58 7.46 -52.48 -0.39 -0.97 16 44 H 0.18 -0.43 8.06 -52.49 -0.42 -0.86 16 45 H 0.16 -0.27 7.52 -52.49 -0.39 -0.67 16 LS Contribution 386.23 15.07 5.82 5.82 Total: 0.00 -11.50 386.23 -10.10 -21.60 By element: Atomic # 1 Polarization: -5.46 SS G_CDS: -5.67 Total: -11.13 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -4.66 Total: -2.75 kcal Atomic # 7 Polarization: -3.19 SS G_CDS: 0.22 Total: -2.98 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -0.37 Total: -3.73 kcal Atomic # 14 Polarization: -1.39 SS G_CDS: -5.43 Total: -6.83 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -11.50 -10.10 -21.60 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_11618758.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 177.042 kcal (2) G-P(sol) polarization free energy of solvation -11.501 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 165.541 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.096 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.597 kcal (6) G-S(sol) free energy of system = (1) + (5) 155.445 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds