Wall clock time and date at job start Sun Mar 7 2021 04:33:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35657 * 116.99875 * 2 1 4 4 C 1.38407 * 120.12007 * 359.97438 * 3 2 1 5 5 C 1.38726 * 120.03057 * 180.02562 * 4 3 2 6 6 O 1.35705 * 119.86483 * 179.97438 * 5 4 3 7 7 C 1.42911 * 116.99674 * 0.02562 * 6 5 4 8 8 C 1.39153 * 120.27204 * 0.02562 * 5 4 3 9 9 C 1.50695 * 119.87553 * 180.02562 * 8 5 4 10 10 O 1.42902 * 109.47368 * 75.00175 * 9 8 5 11 11 Si 1.86302 * 109.46734 * 195.00030 * 9 8 5 12 12 C 1.37583 * 120.23887 * 359.74093 * 8 5 4 13 13 C 1.39816 * 119.96580 * 0.51085 * 12 8 5 14 14 C 1.47296 * 120.13208 * 179.76894 * 13 12 8 15 15 O 1.21629 * 119.99866 * 179.72128 * 14 13 12 16 16 N 1.34774 * 120.00531 * 359.72496 * 14 13 12 17 17 C 1.46496 * 120.00183 * 180.02562 * 16 14 13 18 18 H 1.08998 * 112.91182 * 336.24567 * 17 16 14 19 19 C 1.53948 * 113.54045 * 107.50295 * 17 16 14 20 20 C 1.53779 * 87.02296 * 89.18746 * 19 17 16 21 21 H 1.09001 * 113.61578 * 270.77167 * 20 19 17 22 22 C 1.52995 * 113.61758 * 139.95215 * 20 19 17 23 23 N 1.46506 * 109.47276 * 85.86437 * 22 20 19 24 24 C 1.34948 * 126.03813 * 124.71394 * 23 22 20 25 25 C 1.35318 * 107.74290 * 179.84379 * 24 23 22 26 26 C 1.39870 * 107.92236 * 0.42279 * 25 24 23 27 27 N 1.30841 * 108.19742 * 359.73723 * 26 25 24 28 28 C 1.53780 * 87.17218 * 25.36302 * 20 19 17 29 29 H 1.08997 * 109.46937 * 60.00087 * 1 2 3 30 30 H 1.09003 * 109.47270 * 180.02562 * 1 2 3 31 31 H 1.09005 * 109.47278 * 299.99971 * 1 2 3 32 32 H 1.07997 * 119.98169 * 0.02562 * 4 3 2 33 33 H 1.09001 * 109.46826 * 180.02562 * 7 6 5 34 34 H 1.08997 * 109.46643 * 299.99534 * 7 6 5 35 35 H 1.08995 * 109.47003 * 59.99961 * 7 6 5 36 36 H 1.09005 * 109.47485 * 314.99641 * 9 8 5 37 37 H 0.96694 * 114.00295 * 59.99209 * 10 9 8 38 38 H 1.48495 * 110.00167 * 58.68246 * 11 9 8 39 39 H 1.48505 * 109.99917 * 180.02562 * 11 9 8 40 40 H 1.07997 * 120.01525 * 180.26107 * 12 8 5 41 41 H 0.97006 * 119.99672 * 359.97438 * 16 14 13 42 42 H 1.09000 * 113.66966 * 334.65843 * 19 17 16 43 43 H 1.09003 * 113.61434 * 203.70510 * 19 17 16 44 44 H 1.08997 * 109.47344 * 325.86209 * 22 20 19 45 45 H 1.08998 * 109.47310 * 205.86235 * 22 20 19 46 46 H 1.08002 * 126.12338 * 359.97438 * 24 23 22 47 47 H 1.08000 * 126.03532 * 180.16268 * 25 24 23 48 48 H 1.07995 * 125.90010 * 179.72385 * 26 25 24 49 49 H 1.08996 * 113.61727 * 89.16153 * 28 20 19 50 50 H 1.09002 * 113.61574 * 220.06698 * 28 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2935 2.3711 -0.0005 5 6 1.9252 3.6062 -0.0011 6 8 1.1851 4.7437 -0.0021 7 6 -0.2360 4.5930 -0.0021 8 6 3.3145 3.6834 -0.0016 9 6 3.9915 5.0298 -0.0016 10 8 3.8945 5.6118 1.2999 11 14 5.7860 4.8225 -0.4570 12 6 4.0724 2.5351 0.0038 13 6 3.4461 1.2851 -0.0010 14 6 4.2539 0.0534 -0.0004 15 8 3.7066 -1.0328 0.0005 16 7 5.5995 0.1298 -0.0009 17 6 6.4028 -1.0952 -0.0009 18 1 5.8672 -1.9539 0.4039 19 6 7.0945 -1.3769 -1.3471 20 6 8.2746 -0.5410 -0.8243 21 1 8.1901 0.5222 -1.0489 22 6 9.6438 -1.1182 -1.1891 23 7 10.0343 -0.6454 -2.5197 24 6 11.1764 0.0040 -2.8279 25 6 11.1582 0.2626 -4.1560 26 6 9.9598 -0.2377 -4.6755 27 7 9.2853 -0.7821 -3.6955 28 6 7.8088 -0.9099 0.5941 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3634 0.5138 0.8900 32 1 0.2149 2.3164 -0.0005 33 1 -0.7056 5.5767 -0.0034 34 1 -0.5430 4.0431 -0.8916 35 1 -0.5432 4.0446 0.8884 36 1 3.5052 5.6810 -0.7280 37 1 4.3069 5.0850 1.9981 38 1 5.9006 4.1890 -1.7951 39 1 6.4651 6.1432 -0.4600 40 1 5.1504 2.5993 0.0076 41 1 6.0360 0.9961 -0.0020 42 1 6.5872 -0.9295 -2.2018 43 1 7.3384 -2.4281 -1.5011 44 1 9.5902 -2.2069 -1.1917 45 1 10.3823 -0.7925 -0.4566 46 1 11.9647 0.2680 -2.1384 47 1 11.9306 0.7696 -4.7152 48 1 9.6454 -0.1836 -5.7073 49 1 8.2482 -1.8331 0.9718 50 1 7.8771 -0.0859 1.3043 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:19 Heat of formation + Delta-G solvation = 9.429583 kcal Electronic energy + Delta-G solvation = -34580.887755 eV Core-core repulsion = 29965.134357 eV Total energy + Delta-G solvation = -4615.753399 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.13164 -41.96613 -40.95798 -40.08256 -39.10800 -38.40625 -36.94147 -34.94804 -33.46207 -32.21715 -31.61038 -30.87466 -29.09178 -28.66694 -28.09990 -26.73330 -26.12915 -24.99699 -23.98504 -22.78157 -21.88879 -21.64330 -21.50758 -20.31843 -19.97556 -18.86209 -18.21675 -18.03825 -17.87557 -17.22813 -17.06489 -16.61555 -16.53625 -16.39370 -16.22973 -15.85589 -15.77507 -15.70945 -15.48711 -15.38650 -15.00371 -14.86634 -14.51761 -14.39389 -14.19402 -14.00323 -13.76045 -13.63105 -13.46195 -13.40900 -13.30646 -12.85024 -12.76166 -12.62037 -12.55568 -12.24682 -12.22611 -11.97984 -11.67680 -11.59972 -11.50649 -11.24640 -10.70240 -10.41106 -10.25411 -9.97585 -9.90072 -9.43516 -9.13812 -5.16278 -0.21167 0.11109 1.05978 1.23462 1.57492 1.63362 1.85691 1.94067 2.03868 2.04206 2.12289 2.15567 2.69435 3.27665 3.39127 3.43966 3.47161 3.60063 3.62294 3.71955 3.76633 3.83217 3.97376 3.98129 4.01558 4.04674 4.07797 4.12595 4.13278 4.13641 4.22721 4.29451 4.38803 4.42175 4.49573 4.53429 4.61876 4.69711 4.76336 4.76920 4.79509 4.91664 4.94066 5.01274 5.02519 5.14865 5.17175 5.18612 5.28987 5.64872 5.81743 6.00066 6.15022 6.28509 6.57365 6.61821 6.87720 7.38685 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.235 3.765 4 C -0.314 4.314 5 C 0.223 3.777 6 O -0.296 6.296 7 C 0.021 3.979 8 C -0.199 4.199 9 C -0.048 4.048 10 O -0.535 6.535 11 Si 0.669 3.331 12 C -0.004 4.004 13 C -0.209 4.209 14 C 0.569 3.431 15 O -0.515 6.515 16 N -0.715 5.715 17 C 0.122 3.878 18 H 0.107 0.893 19 C -0.134 4.134 20 C -0.124 4.124 21 H 0.094 0.906 22 C 0.142 3.858 23 N -0.371 5.371 24 C 0.050 3.950 25 C -0.275 4.275 26 C 0.040 3.960 27 N -0.288 5.288 28 C -0.137 4.137 29 H 0.057 0.943 30 H 0.107 0.893 31 H 0.058 0.942 32 H 0.145 0.855 33 H 0.107 0.893 34 H 0.058 0.942 35 H 0.060 0.940 36 H 0.115 0.885 37 H 0.375 0.625 38 H -0.252 1.252 39 H -0.249 1.249 40 H 0.138 0.862 41 H 0.396 0.604 42 H 0.075 0.925 43 H 0.092 0.908 44 H 0.087 0.913 45 H 0.098 0.902 46 H 0.172 0.828 47 H 0.146 0.854 48 H 0.181 0.819 49 H 0.100 0.900 50 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.469 1.191 3.307 3.810 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.183 6.183 3 C 0.185 3.815 4 C -0.334 4.334 5 C 0.175 3.825 6 O -0.207 6.207 7 C -0.073 4.073 8 C -0.200 4.200 9 C -0.159 4.159 10 O -0.340 6.340 11 Si 0.570 3.430 12 C -0.022 4.022 13 C -0.213 4.213 14 C 0.357 3.643 15 O -0.391 6.391 16 N -0.368 5.368 17 C 0.016 3.984 18 H 0.125 0.875 19 C -0.173 4.173 20 C -0.143 4.143 21 H 0.113 0.887 22 C 0.020 3.980 23 N -0.154 5.154 24 C -0.096 4.096 25 C -0.305 4.305 26 C -0.146 4.146 27 N -0.110 5.110 28 C -0.176 4.176 29 H 0.076 0.924 30 H 0.126 0.874 31 H 0.076 0.924 32 H 0.163 0.837 33 H 0.125 0.875 34 H 0.077 0.923 35 H 0.079 0.921 36 H 0.132 0.868 37 H 0.222 0.778 38 H -0.176 1.176 39 H -0.174 1.174 40 H 0.155 0.845 41 H 0.231 0.769 42 H 0.094 0.906 43 H 0.110 0.890 44 H 0.105 0.895 45 H 0.116 0.884 46 H 0.189 0.811 47 H 0.164 0.836 48 H 0.198 0.802 49 H 0.119 0.881 50 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 0.399 0.391 2.882 2.936 hybrid contribution -0.083 1.089 -0.575 1.235 sum 0.317 1.481 2.307 2.759 Atomic orbital electron populations 1.23248 0.78196 1.04884 1.01336 1.86403 1.21204 1.24993 1.85743 1.18711 0.90609 0.84424 0.87709 1.21308 1.01157 0.91493 1.19407 1.18710 0.90432 0.84709 0.88646 1.86161 1.19478 1.28497 1.86555 1.23219 0.77802 1.04666 1.01653 1.19442 0.90870 0.96374 1.13310 1.24805 1.09582 0.92258 0.89253 1.86553 1.82061 1.49297 1.16073 0.95510 0.77387 0.84636 0.85486 1.20664 0.98374 0.90041 0.93136 1.19023 0.90673 0.93508 1.18086 1.17769 0.81633 0.88576 0.76283 1.90855 1.71296 1.28647 1.48284 1.45532 1.05774 1.08902 1.76585 1.21835 0.90896 0.88458 0.97172 0.87461 1.23431 0.95526 1.00632 0.97706 1.22919 0.93599 1.00801 0.96944 0.88735 1.21799 0.97300 1.00068 0.78793 1.48758 1.14424 1.44483 1.07707 1.22599 0.91460 0.97942 0.97641 1.21551 1.01710 1.13042 0.94174 1.23940 0.93740 0.97814 0.99105 1.77407 1.19061 1.23727 0.90756 1.23358 0.95273 1.03321 0.95658 0.92415 0.87428 0.92357 0.83741 0.87497 0.92292 0.92132 0.86780 0.77790 1.17595 1.17354 0.84484 0.76897 0.90574 0.88981 0.89462 0.88409 0.81065 0.83648 0.80219 0.88141 0.90121 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.27 -1.00 8.56 -40.60 -0.35 -1.35 16 3 C 0.24 0.66 6.70 -38.73 -0.26 0.40 16 4 C -0.31 -0.33 8.01 -39.34 -0.31 -0.64 16 5 C 0.22 0.35 6.67 -39.06 -0.26 0.09 16 6 O -0.30 -0.46 9.80 -18.82 -0.18 -0.65 16 7 C 0.02 -0.04 9.80 101.05 0.99 0.95 16 8 C -0.20 -0.15 5.27 -104.52 -0.55 -0.70 16 9 C -0.05 -0.02 2.37 36.00 0.09 0.07 16 10 O -0.54 -0.39 12.88 -35.23 -0.45 -0.84 16 11 Si 0.67 -0.78 29.91 -169.99 -5.08 -5.87 16 12 C 0.00 0.00 8.14 -39.23 -0.32 -0.32 16 13 C -0.21 -0.47 5.89 -104.84 -0.62 -1.09 16 14 C 0.57 1.94 7.76 -12.58 -0.10 1.84 16 15 O -0.52 -3.74 14.75 -16.67 -0.25 -3.99 16 16 N -0.72 -0.01 5.21 -54.04 -0.28 -0.29 16 17 C 0.12 -0.05 4.33 -67.03 -0.29 -0.34 16 18 H 0.11 0.14 7.46 -51.93 -0.39 -0.25 16 19 C -0.13 0.00 7.44 -25.83 -0.19 -0.20 16 20 C -0.12 0.26 3.69 -89.81 -0.33 -0.07 16 21 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 22 C 0.14 -0.30 6.33 -4.04 -0.03 -0.32 16 23 N -0.37 -0.36 3.68 -61.36 -0.23 -0.59 16 24 C 0.05 0.00 11.45 -17.22 -0.20 -0.20 16 25 C -0.28 -0.28 10.80 -40.01 -0.43 -0.71 16 26 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 27 N -0.29 -0.99 12.42 30.62 0.38 -0.61 16 28 C -0.14 0.47 7.39 -25.92 -0.19 0.28 16 29 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 30 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 31 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 32 H 0.15 -0.17 4.50 -52.49 -0.24 -0.41 16 33 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 34 H 0.06 -0.17 7.65 -51.93 -0.40 -0.57 16 35 H 0.06 -0.17 7.65 -51.93 -0.40 -0.57 16 36 H 0.11 0.18 7.82 -51.93 -0.41 -0.23 16 37 H 0.38 -1.29 8.70 45.56 0.40 -0.90 16 38 H -0.25 -0.33 7.11 56.52 0.40 0.08 16 39 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 40 H 0.14 -0.45 3.44 -52.49 -0.18 -0.63 16 41 H 0.40 -1.06 6.72 -40.82 -0.27 -1.34 16 42 H 0.08 0.19 8.14 -51.93 -0.42 -0.23 16 43 H 0.09 0.01 7.92 -51.93 -0.41 -0.41 16 44 H 0.09 -0.19 7.87 -51.93 -0.41 -0.60 16 45 H 0.10 -0.45 8.07 -51.93 -0.42 -0.87 16 46 H 0.17 -0.57 8.06 -52.49 -0.42 -0.99 16 47 H 0.15 -0.10 8.06 -52.49 -0.42 -0.53 16 48 H 0.18 -0.03 8.06 -52.49 -0.42 -0.46 16 49 H 0.10 -0.44 8.10 -51.93 -0.42 -0.86 16 50 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 LS Contribution 411.38 15.07 6.20 6.20 Total: 0.00 -12.32 411.38 -9.38 -21.70 By element: Atomic # 1 Polarization: -6.70 SS G_CDS: -6.92 Total: -13.62 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: -2.22 Total: -0.10 kcal Atomic # 7 Polarization: -1.36 SS G_CDS: -0.13 Total: -1.48 kcal Atomic # 8 Polarization: -5.60 SS G_CDS: -1.23 Total: -6.83 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.08 Total: -5.87 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -12.32 -9.38 -21.70 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.132 kcal (2) G-P(sol) polarization free energy of solvation -12.321 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.812 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.382 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.703 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.430 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds