Wall clock time and date at job start Sun Mar 7 2021 04:33:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86304 * 109.47349 * 2 1 4 4 C 1.50703 * 109.47055 * 240.00160 * 2 1 3 5 5 C 1.37850 * 119.88862 * 300.00547 * 4 2 1 6 6 C 1.39664 * 119.87577 * 179.97438 * 5 4 2 7 7 C 1.47695 * 120.16722 * 180.02562 * 6 5 4 8 8 O 1.21565 * 120.00030 * 180.02562 * 7 6 5 9 9 N 1.34779 * 119.99836 * 359.97438 * 7 6 5 10 10 C 1.46494 * 120.00109 * 180.02562 * 9 7 6 11 11 H 1.09007 * 112.85031 * 336.19227 * 10 9 7 12 12 C 1.53785 * 113.61570 * 107.49860 * 10 9 7 13 13 C 1.53784 * 87.08038 * 89.11896 * 12 10 9 14 14 H 1.08999 * 113.61290 * 270.88531 * 13 12 10 15 15 C 1.53001 * 113.61443 * 139.98109 * 13 12 10 16 16 N 1.46500 * 109.47100 * 87.50110 * 15 13 12 17 17 C 1.34947 * 126.03283 * 124.99610 * 16 15 13 18 18 C 1.35321 * 107.74063 * 179.97438 * 17 16 15 19 19 C 1.39865 * 107.92245 * 0.02562 * 18 17 16 20 20 N 1.30843 * 108.20083 * 359.74142 * 19 18 17 21 21 C 1.53782 * 113.61492 * 204.99957 * 10 9 7 22 22 C 1.39828 * 119.66750 * 359.97438 * 6 5 4 23 23 F 1.35097 * 120.10756 * 179.97438 * 22 6 5 24 24 C 1.38319 * 119.77800 * 0.02562 * 22 6 5 25 25 C 1.38199 * 120.11582 * 359.74293 * 24 22 6 26 26 H 0.96708 * 114.00101 * 59.99198 * 1 2 3 27 27 H 1.09002 * 109.46984 * 120.00249 * 2 1 3 28 28 H 1.48497 * 110.00028 * 298.68295 * 3 2 1 29 29 H 1.48501 * 109.99652 * 59.99990 * 3 2 1 30 30 H 1.08003 * 120.06559 * 359.94938 * 5 4 2 31 31 H 0.97006 * 119.99861 * 359.97438 * 9 7 6 32 32 H 1.09004 * 113.61032 * 203.66394 * 12 10 9 33 33 H 1.08998 * 113.61219 * 334.56699 * 12 10 9 34 34 H 1.09002 * 109.46718 * 207.50237 * 15 13 12 35 35 H 1.09000 * 109.47013 * 327.50009 * 15 13 12 36 36 H 1.07997 * 126.13068 * 0.02562 * 17 16 15 37 37 H 1.08002 * 126.03900 * 180.02562 * 18 17 16 38 38 H 1.08005 * 125.90040 * 179.97438 * 19 18 17 39 39 H 1.08990 * 113.61367 * 25.42652 * 21 10 9 40 40 H 1.09003 * 113.60980 * 156.25038 * 21 10 9 41 41 H 1.08000 * 119.94078 * 179.97438 * 24 22 6 42 42 H 1.08004 * 119.82859 * 180.25133 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5968 -2.0301 -1.4465 6 6 2.0620 -2.6881 -2.5872 7 6 1.7071 -4.1018 -2.8253 8 8 2.1141 -4.6717 -3.8190 9 7 0.9328 -4.7604 -1.9403 10 6 0.5811 -6.1629 -2.1760 11 1 0.6307 -6.4404 -3.2290 12 6 1.3084 -7.1456 -1.2431 13 6 0.1367 -6.9610 -0.2643 14 1 0.2769 -6.1357 0.4337 15 6 -0.2964 -8.2567 0.4245 16 7 0.5011 -8.4552 1.6373 17 6 0.0180 -8.6403 2.8836 18 6 1.0736 -8.7848 3.7178 19 6 2.2418 -8.6839 2.9552 20 7 1.8997 -8.4915 1.7071 21 6 -0.7232 -6.5954 -1.4858 22 6 2.8646 -2.0013 -3.5033 23 9 3.3200 -2.6292 -4.6095 24 6 3.1917 -0.6772 -3.2727 25 6 2.7224 -0.0337 -2.1433 26 1 -0.3934 0.4418 -0.7650 27 1 1.7923 -0.5139 0.8900 28 1 1.5879 2.4586 -1.2242 29 1 1.5615 2.4678 1.2085 30 1 0.9764 -2.5545 -0.7347 31 1 0.6089 -4.3060 -1.1468 32 1 1.3852 -8.1552 -1.6468 33 1 2.2577 -6.7667 -0.8644 34 1 -1.3516 -8.1917 0.6900 35 1 -0.1432 -9.0969 -0.2527 36 1 -1.0244 -8.6690 3.1647 37 1 1.0231 -8.9490 4.7841 38 1 3.2517 -8.7564 3.3311 39 1 -1.4140 -5.7724 -1.3027 40 1 -1.2025 -7.4537 -1.9566 41 1 3.8118 -0.1444 -3.9783 42 1 2.9773 1.0014 -1.9699 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:23 Heat of formation + Delta-G solvation = 32.693663 kcal Electronic energy + Delta-G solvation = -27753.780485 eV Core-core repulsion = 23618.021539 eV Total energy + Delta-G solvation = -4135.758946 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.132 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -49.86671 -42.08349 -41.51302 -40.50873 -39.23995 -37.70618 -35.14974 -33.74647 -32.54286 -32.25859 -30.92210 -28.61800 -26.82545 -26.77933 -25.72766 -24.33402 -23.14341 -21.92450 -21.75379 -21.55017 -20.40453 -19.29653 -18.45022 -18.42676 -18.13016 -17.39982 -16.93303 -16.83517 -16.51912 -16.33056 -16.09310 -15.91150 -15.72245 -15.57019 -15.14216 -14.92868 -14.82864 -14.52529 -14.38343 -14.34434 -13.79425 -13.66641 -13.62998 -13.48636 -13.26712 -12.94392 -12.85777 -12.42186 -12.31272 -11.86941 -11.71753 -11.55232 -11.32857 -11.11518 -10.75534 -10.43955 -10.29187 -10.10936 -9.87240 -9.46898 -5.11144 -0.53777 -0.13081 1.02564 1.09296 1.44125 1.59021 1.63553 1.82543 1.91908 2.00959 2.44977 2.99248 3.13109 3.20229 3.31731 3.33762 3.38658 3.50203 3.54643 3.69560 3.84863 3.93239 3.95878 3.97715 4.06456 4.24650 4.29221 4.31631 4.42585 4.53402 4.61481 4.63457 4.66414 4.73094 4.78030 4.83364 4.87599 4.93792 5.00077 5.03560 5.07788 5.15699 5.47751 5.52134 5.78719 6.11254 6.19971 6.34129 6.84343 7.10897 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.074 4.074 3 Si 0.685 3.315 4 C -0.139 4.139 5 C -0.031 4.031 6 C -0.175 4.175 7 C 0.562 3.438 8 O -0.517 6.517 9 N -0.708 5.708 10 C 0.119 3.881 11 H 0.108 0.892 12 C -0.133 4.133 13 C -0.122 4.122 14 H 0.094 0.906 15 C 0.142 3.858 16 N -0.372 5.372 17 C 0.050 3.950 18 C -0.275 4.275 19 C 0.041 3.959 20 N -0.289 5.289 21 C -0.138 4.138 22 C 0.168 3.832 23 F -0.110 7.110 24 C -0.156 4.156 25 C -0.059 4.059 26 H 0.378 0.622 27 H 0.123 0.877 28 H -0.257 1.257 29 H -0.254 1.254 30 H 0.138 0.862 31 H 0.400 0.600 32 H 0.094 0.906 33 H 0.076 0.924 34 H 0.098 0.902 35 H 0.088 0.912 36 H 0.172 0.828 37 H 0.146 0.854 38 H 0.182 0.818 39 H 0.079 0.921 40 H 0.102 0.898 41 H 0.150 0.850 42 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.367 2.575 3.773 5.144 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.183 4.183 3 Si 0.585 3.415 4 C -0.139 4.139 5 C -0.050 4.050 6 C -0.179 4.179 7 C 0.349 3.651 8 O -0.393 6.393 9 N -0.360 5.360 10 C 0.013 3.987 11 H 0.126 0.874 12 C -0.172 4.172 13 C -0.141 4.141 14 H 0.112 0.888 15 C 0.021 3.979 16 N -0.154 5.154 17 C -0.096 4.096 18 C -0.304 4.304 19 C -0.145 4.145 20 N -0.111 5.111 21 C -0.176 4.176 22 C 0.147 3.853 23 F -0.088 7.088 24 C -0.175 4.175 25 C -0.077 4.077 26 H 0.226 0.774 27 H 0.141 0.859 28 H -0.182 1.182 29 H -0.178 1.178 30 H 0.155 0.845 31 H 0.236 0.764 32 H 0.112 0.888 33 H 0.095 0.905 34 H 0.116 0.884 35 H 0.106 0.894 36 H 0.189 0.811 37 H 0.164 0.836 38 H 0.199 0.801 39 H 0.097 0.903 40 H 0.120 0.880 41 H 0.168 0.832 42 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -1.864 2.834 2.223 4.056 hybrid contribution -1.481 -0.246 0.700 1.657 sum -3.346 2.588 2.923 5.142 Atomic orbital electron populations 1.86612 1.17444 1.79945 1.49500 1.25029 0.84144 1.11203 0.97958 0.94978 0.91597 0.74147 0.80769 1.20272 1.00735 0.94853 0.98081 1.21008 0.95762 0.93690 0.94521 1.20056 1.04700 0.95171 0.97946 1.17955 0.78570 0.85543 0.83037 1.90874 1.52394 1.68438 1.27589 1.45517 1.52581 1.12207 1.25659 1.21868 0.95354 0.80468 1.00971 0.87373 1.23406 0.98177 1.00029 0.95559 1.22905 0.97988 0.97145 0.96032 0.88761 1.21786 0.93665 0.98440 0.84043 1.48742 1.04751 1.55356 1.06587 1.22606 1.00312 1.01702 0.85030 1.21556 0.91465 1.16279 1.01105 1.23950 1.00095 0.99754 0.90689 1.77404 0.89538 1.23695 1.20418 1.23361 0.96258 1.02366 0.95632 1.17754 0.93600 0.90550 0.83367 1.91634 1.85976 1.82072 1.49129 1.21173 1.03435 0.92913 0.99970 1.21100 0.94520 0.99822 0.92275 0.77429 0.85927 1.18159 1.17831 0.84466 0.76432 0.88780 0.90483 0.88418 0.89416 0.81082 0.83585 0.80126 0.90283 0.87979 0.83181 0.84029 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.61 12.76 -35.23 -0.45 0.16 16 2 C -0.07 0.18 2.82 36.01 0.10 0.28 16 3 Si 0.68 -1.95 29.78 -169.99 -5.06 -7.01 16 4 C -0.14 0.27 5.39 -104.68 -0.56 -0.30 16 5 C -0.03 0.03 9.09 -39.19 -0.36 -0.32 16 6 C -0.17 -0.26 5.88 -104.91 -0.62 -0.88 16 7 C 0.56 1.81 7.77 -12.40 -0.10 1.71 16 8 O -0.52 -3.77 14.94 5.31 0.08 -3.69 16 9 N -0.71 -0.05 5.21 -54.01 -0.28 -0.33 16 10 C 0.12 -0.03 4.32 -67.12 -0.29 -0.32 16 11 H 0.11 0.16 7.46 -51.92 -0.39 -0.23 16 12 C -0.13 0.00 7.43 -25.91 -0.19 -0.19 16 13 C -0.12 0.23 3.71 -89.80 -0.33 -0.10 16 14 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 15 C 0.14 -0.27 6.35 -4.04 -0.03 -0.30 16 16 N -0.37 -0.37 3.68 -61.36 -0.23 -0.60 16 17 C 0.05 0.00 11.45 -17.22 -0.20 -0.19 16 18 C -0.27 -0.24 10.80 -40.01 -0.43 -0.67 16 19 C 0.04 0.08 12.03 -17.36 -0.21 -0.13 16 20 N -0.29 -0.95 12.42 30.63 0.38 -0.57 16 21 C -0.14 0.41 7.39 -25.91 -0.19 0.22 16 22 C 0.17 0.36 7.29 -38.96 -0.28 0.07 16 23 F -0.11 -0.55 15.55 2.25 0.04 -0.51 16 24 C -0.16 0.13 10.01 -39.57 -0.40 -0.26 16 25 C -0.06 0.14 8.66 -39.51 -0.34 -0.21 16 26 H 0.38 -1.42 8.70 45.56 0.40 -1.03 16 27 H 0.12 -0.40 7.96 -51.93 -0.41 -0.81 16 28 H -0.26 0.26 7.10 56.52 0.40 0.66 16 29 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 30 H 0.14 -0.38 6.41 -52.48 -0.34 -0.72 16 31 H 0.40 -0.90 6.73 -40.82 -0.27 -1.18 16 32 H 0.09 -0.01 7.90 -51.93 -0.41 -0.42 16 33 H 0.08 0.17 8.14 -51.93 -0.42 -0.25 16 34 H 0.10 -0.42 8.07 -51.93 -0.42 -0.84 16 35 H 0.09 -0.18 7.84 -51.93 -0.41 -0.59 16 36 H 0.17 -0.55 8.06 -52.49 -0.42 -0.97 16 37 H 0.15 -0.13 8.06 -52.49 -0.42 -0.55 16 38 H 0.18 -0.10 8.06 -52.48 -0.42 -0.52 16 39 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 40 H 0.10 -0.41 8.10 -51.93 -0.42 -0.83 16 41 H 0.15 -0.42 8.06 -52.49 -0.42 -0.84 16 42 H 0.14 -0.64 4.86 -52.48 -0.25 -0.89 16 LS Contribution 359.62 15.07 5.42 5.42 Total: 0.00 -10.15 359.62 -9.61 -19.76 By element: Atomic # 1 Polarization: -5.96 SS G_CDS: -5.08 Total: -11.04 kcal Atomic # 6 Polarization: 2.85 SS G_CDS: -4.43 Total: -1.58 kcal Atomic # 7 Polarization: -1.37 SS G_CDS: -0.13 Total: -1.50 kcal Atomic # 8 Polarization: -3.17 SS G_CDS: -0.37 Total: -3.54 kcal Atomic # 9 Polarization: -0.55 SS G_CDS: 0.04 Total: -0.51 kcal Atomic # 14 Polarization: -1.95 SS G_CDS: -5.06 Total: -7.01 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -10.15 -9.61 -19.76 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.454 kcal (2) G-P(sol) polarization free energy of solvation -10.146 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.308 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.614 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.760 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.694 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds