Wall clock time and date at job start Sun Mar 7 2021 04:33:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86296 * 109.47175 * 2 1 4 4 C 1.50693 * 109.47052 * 239.99730 * 2 1 3 5 5 C 1.38233 * 120.00207 * 299.99585 * 4 2 1 6 6 C 1.38234 * 120.00037 * 179.72405 * 5 4 2 7 7 C 1.38234 * 120.00240 * 0.26327 * 6 5 4 8 8 C 1.50700 * 120.00260 * 179.97438 * 7 6 5 9 9 C 1.50702 * 109.46901 * 90.00181 * 8 7 6 10 10 O 1.21283 * 120.00178 * 359.97438 * 9 8 7 11 11 N 1.34775 * 119.99907 * 180.02562 * 9 8 7 12 12 C 1.46500 * 120.00054 * 179.97438 * 11 9 8 13 13 H 1.08998 * 112.85137 * 23.80325 * 12 11 9 14 14 C 1.53785 * 113.61294 * 155.00036 * 12 11 9 15 15 C 1.53773 * 87.08162 * 89.11573 * 14 12 11 16 16 H 1.09003 * 113.61479 * 270.79788 * 15 14 12 17 17 C 1.53005 * 113.61700 * 139.98020 * 15 14 12 18 18 N 1.46491 * 109.47350 * 174.99894 * 17 15 14 19 19 C 1.34952 * 126.03985 * 125.00320 * 18 17 15 20 20 C 1.35310 * 107.75037 * 179.97438 * 19 18 17 21 21 C 1.39874 * 107.91853 * 359.97438 * 20 19 18 22 22 N 1.30839 * 108.20211 * 359.74632 * 21 20 19 23 23 C 1.53777 * 87.08466 * 25.43285 * 15 14 12 24 24 C 1.38238 * 119.99693 * 0.02562 * 7 6 5 25 25 C 1.38234 * 120.00063 * 359.97438 * 24 7 6 26 26 H 0.96695 * 113.99708 * 60.00125 * 1 2 3 27 27 H 1.09001 * 109.47057 * 119.99805 * 2 1 3 28 28 H 1.48495 * 110.00434 * 59.99632 * 3 2 1 29 29 H 1.48500 * 110.00121 * 181.31858 * 3 2 1 30 30 H 1.08002 * 120.00157 * 0.02562 * 5 4 2 31 31 H 1.07999 * 120.00009 * 180.28389 * 6 5 4 32 32 H 1.08999 * 109.47240 * 210.00239 * 8 7 6 33 33 H 1.08999 * 109.46861 * 329.99859 * 8 7 6 34 34 H 0.97003 * 120.00087 * 359.97438 * 11 9 8 35 35 H 1.09006 * 113.61041 * 203.66451 * 14 12 11 36 36 H 1.09001 * 113.61413 * 334.48347 * 14 12 11 37 37 H 1.09002 * 109.46793 * 295.00143 * 17 15 14 38 38 H 1.09005 * 109.46654 * 54.99408 * 17 15 14 39 39 H 1.08009 * 126.11962 * 359.97438 * 19 18 17 40 40 H 1.07994 * 126.04074 * 179.97438 * 20 19 18 41 41 H 1.07999 * 125.89666 * 179.97438 * 21 20 19 42 42 H 1.09004 * 113.61544 * 220.02048 * 23 15 14 43 43 H 1.08997 * 113.61976 * 89.11618 * 23 15 14 44 44 H 1.08002 * 119.99673 * 179.97438 * 24 7 6 45 45 H 1.08000 * 120.00005 * 179.97438 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.5975 -2.0339 -1.4491 6 6 2.0535 -2.6839 -2.5806 7 6 2.8480 -2.0121 -3.4908 8 6 3.3456 -2.7209 -4.7240 9 6 2.3509 -2.5421 -5.8419 10 8 1.3374 -1.9026 -5.6554 11 7 2.5871 -3.0939 -7.0487 12 6 1.6198 -2.9206 -8.1353 13 1 0.9958 -2.0359 -8.0094 14 6 2.2399 -3.0428 -9.5373 15 6 1.9502 -4.5503 -9.4482 16 1 2.7608 -5.1250 -9.0000 17 6 1.4469 -5.1564 -10.7598 18 7 1.3147 -6.6074 -10.6083 19 6 0.2008 -7.3320 -10.8433 20 6 0.4906 -8.6288 -10.5876 21 6 1.8277 -8.6992 -10.1831 22 7 2.3243 -7.4889 -10.2007 23 6 0.8250 -4.1961 -8.4617 24 6 3.1868 -0.6903 -3.2691 25 6 2.7307 -0.0403 -2.1375 26 1 -0.3932 0.4417 -0.7650 27 1 1.7923 -0.5138 0.8900 28 1 1.5615 2.4679 1.2084 29 1 3.5346 1.7703 -0.0321 30 1 0.9763 -2.5587 -0.7383 31 1 1.7889 -3.7166 -2.7537 32 1 4.3063 -2.3007 -5.0219 33 1 3.4645 -3.7829 -4.5096 34 1 3.3975 -3.6057 -7.1978 35 1 1.6684 -2.5334 -10.3133 36 1 3.3025 -2.8020 -9.5672 37 1 0.4766 -4.7272 -11.0096 38 1 2.1571 -4.9374 -11.5572 39 1 -0.7516 -6.9459 -11.1759 40 1 -0.1902 -9.4621 -10.6796 41 1 2.3594 -9.5980 -9.9076 42 1 0.7458 -4.8878 -7.6230 43 1 -0.1332 -4.0021 -8.9435 44 1 3.8078 -0.1655 -3.9800 45 1 2.9957 0.9922 -1.9641 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:27 Heat of formation + Delta-G solvation = 67.108716 kcal Electronic energy + Delta-G solvation = -26488.810038 eV Core-core repulsion = 22668.459797 eV Total energy + Delta-G solvation = -3820.350241 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.157 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.10113 -41.40301 -40.54449 -39.34198 -37.55722 -35.05187 -34.09239 -33.33591 -31.90536 -30.99648 -29.88335 -28.45952 -26.90718 -25.85024 -24.25364 -23.77850 -22.48920 -21.98825 -21.63121 -21.37798 -20.23913 -18.49213 -18.34447 -17.99918 -17.37921 -16.90195 -16.75721 -16.34223 -16.28204 -15.94584 -15.85304 -15.47274 -15.42167 -14.87238 -14.70073 -14.61339 -14.43340 -14.31118 -14.05666 -13.93212 -13.69215 -13.59411 -13.25197 -13.21163 -12.85937 -12.77066 -12.34411 -12.19339 -11.90507 -11.74317 -11.64254 -11.57984 -11.44356 -10.92722 -10.38747 -10.30460 -10.11782 -9.82922 -9.57483 -9.47280 -4.99106 0.27396 0.50302 1.00227 1.33953 1.56353 1.61353 1.65695 1.98530 1.99362 2.04082 2.80675 3.24716 3.34120 3.38626 3.49260 3.58368 3.64489 3.77431 3.84695 3.88732 3.91747 3.94246 4.04176 4.05119 4.24493 4.28310 4.34380 4.37562 4.49434 4.50336 4.52463 4.55500 4.64330 4.71039 4.71908 4.86574 4.86831 4.92055 5.01096 5.05994 5.10541 5.14197 5.40971 5.48923 5.58308 5.61451 5.76209 6.03414 6.09405 6.41291 6.62633 6.80739 7.19507 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.068 4.068 3 Si 0.689 3.311 4 C -0.119 4.119 5 C -0.091 4.091 6 C -0.103 4.103 7 C -0.064 4.064 8 C -0.104 4.104 9 C 0.518 3.482 10 O -0.524 6.524 11 N -0.716 5.716 12 C 0.123 3.877 13 H 0.106 0.894 14 C -0.138 4.138 15 C -0.123 4.123 16 H 0.105 0.895 17 C 0.142 3.858 18 N -0.370 5.370 19 C 0.052 3.948 20 C -0.275 4.275 21 C 0.044 3.956 22 N -0.297 5.297 23 C -0.146 4.146 24 C -0.099 4.099 25 C -0.116 4.116 26 H 0.380 0.620 27 H 0.113 0.887 28 H -0.255 1.255 29 H -0.258 1.258 30 H 0.126 0.874 31 H 0.122 0.878 32 H 0.106 0.894 33 H 0.105 0.895 34 H 0.402 0.598 35 H 0.099 0.901 36 H 0.080 0.920 37 H 0.098 0.902 38 H 0.086 0.914 39 H 0.172 0.828 40 H 0.147 0.853 41 H 0.182 0.818 42 H 0.071 0.929 43 H 0.092 0.908 44 H 0.124 0.876 45 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.096 0.092 -4.842 4.965 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.591 3.409 4 C -0.119 4.119 5 C -0.109 4.109 6 C -0.121 4.121 7 C -0.064 4.064 8 C -0.144 4.144 9 C 0.304 3.696 10 O -0.399 6.399 11 N -0.368 5.368 12 C 0.017 3.983 13 H 0.124 0.876 14 C -0.176 4.176 15 C -0.142 4.142 16 H 0.123 0.877 17 C 0.021 3.979 18 N -0.152 5.152 19 C -0.094 4.094 20 C -0.305 4.305 21 C -0.142 4.142 22 N -0.119 5.119 23 C -0.185 4.185 24 C -0.118 4.118 25 C -0.133 4.133 26 H 0.227 0.773 27 H 0.130 0.870 28 H -0.180 1.180 29 H -0.183 1.183 30 H 0.144 0.856 31 H 0.140 0.860 32 H 0.124 0.876 33 H 0.123 0.877 34 H 0.236 0.764 35 H 0.118 0.882 36 H 0.098 0.902 37 H 0.116 0.884 38 H 0.105 0.895 39 H 0.189 0.811 40 H 0.164 0.836 41 H 0.199 0.801 42 H 0.090 0.910 43 H 0.110 0.890 44 H 0.142 0.858 45 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 1.967 1.741 -3.529 4.399 hybrid contribution -0.291 -1.612 -0.243 1.655 sum 1.677 0.130 -3.771 4.129 Atomic orbital electron populations 1.86489 1.17082 1.81754 1.49286 1.25048 0.85293 1.10082 0.97510 0.94615 0.80889 0.78343 0.87073 1.20328 0.99168 0.95304 0.97088 1.20954 0.98757 0.93843 0.97344 1.21017 0.97010 1.00018 0.94099 1.19254 0.98214 0.94264 0.94670 1.20693 0.98881 1.03015 0.91767 1.20581 0.87366 0.78595 0.83052 1.90756 1.27799 1.39485 1.81875 1.45699 1.24417 1.55646 1.11086 1.21752 0.91325 0.99167 0.86037 0.87579 1.23348 1.02471 0.94937 0.96872 1.22967 0.99903 0.96037 0.95272 0.87725 1.21792 1.03176 0.74442 0.98496 1.48711 1.07865 1.06990 1.51678 1.22597 0.92733 0.92530 1.01517 1.21556 0.97757 0.96802 1.14357 1.23921 0.94692 0.95939 0.99675 1.77310 1.12667 1.00066 1.21816 1.23515 0.97680 0.97873 0.99435 1.20905 0.99954 0.93817 0.97076 1.20942 0.98452 0.99259 0.94679 0.77283 0.86986 1.18014 1.18330 0.85616 0.86041 0.87621 0.87707 0.76353 0.88219 0.90178 0.88412 0.89537 0.81064 0.83555 0.80090 0.90982 0.89003 0.85787 0.85647 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.85 12.77 -35.23 -0.45 -1.30 16 2 C -0.07 -0.07 2.82 36.00 0.10 0.04 16 3 Si 0.69 -0.06 29.79 -169.99 -5.06 -5.12 16 4 C -0.12 -0.18 5.39 -104.63 -0.56 -0.75 16 5 C -0.09 -0.18 9.61 -39.58 -0.38 -0.56 16 6 C -0.10 -0.16 9.70 -39.58 -0.38 -0.55 16 7 C -0.06 -0.06 4.37 -104.62 -0.46 -0.52 16 8 C -0.10 0.16 5.83 -29.03 -0.17 -0.01 16 9 C 0.52 0.37 7.82 -10.99 -0.09 0.29 16 10 O -0.52 -2.64 15.63 5.56 0.09 -2.55 16 11 N -0.72 1.17 5.26 -53.01 -0.28 0.89 16 12 C 0.12 -0.18 4.32 -67.11 -0.29 -0.47 16 13 H 0.11 0.03 7.46 -51.93 -0.39 -0.36 16 14 C -0.14 0.49 7.39 -25.92 -0.19 0.30 16 15 C -0.12 0.29 3.75 -89.81 -0.34 -0.04 16 16 H 0.10 -0.09 7.97 -51.93 -0.41 -0.50 16 17 C 0.14 -0.31 6.34 -4.04 -0.03 -0.34 16 18 N -0.37 -0.28 3.68 -61.36 -0.23 -0.51 16 19 C 0.05 0.00 11.45 -17.22 -0.20 -0.20 16 20 C -0.28 -0.21 10.80 -40.01 -0.43 -0.64 16 21 C 0.04 0.07 12.03 -17.36 -0.21 -0.14 16 22 N -0.30 -0.87 12.28 30.63 0.38 -0.49 16 23 C -0.15 0.23 7.43 -25.92 -0.19 0.03 16 24 C -0.10 -0.09 9.70 -39.58 -0.38 -0.47 16 25 C -0.12 -0.11 8.67 -39.58 -0.34 -0.45 16 26 H 0.38 -0.74 8.70 45.56 0.40 -0.34 16 27 H 0.11 0.13 7.96 -51.93 -0.41 -0.28 16 28 H -0.26 -0.77 7.11 56.52 0.40 -0.36 16 29 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 30 H 0.13 0.19 8.06 -52.49 -0.42 -0.23 16 31 H 0.12 0.03 8.06 -52.49 -0.42 -0.39 16 32 H 0.11 -0.39 8.09 -51.93 -0.42 -0.81 16 33 H 0.10 -0.34 8.09 -51.93 -0.42 -0.76 16 34 H 0.40 -1.55 8.70 -40.82 -0.36 -1.91 16 35 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 36 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 37 H 0.10 -0.42 7.77 -51.93 -0.40 -0.83 16 38 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 39 H 0.17 -0.54 8.06 -52.48 -0.42 -0.96 16 40 H 0.15 -0.14 8.06 -52.49 -0.42 -0.56 16 41 H 0.18 -0.17 8.06 -52.49 -0.42 -0.60 16 42 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 43 H 0.09 -0.21 7.90 -51.93 -0.41 -0.62 16 44 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 45 H 0.13 -0.11 4.88 -52.49 -0.26 -0.37 16 LS Contribution 379.45 15.07 5.72 5.72 Total: 0.00 -10.14 379.45 -10.89 -21.02 By element: Atomic # 1 Polarization: -6.66 SS G_CDS: -6.51 Total: -13.17 kcal Atomic # 6 Polarization: 0.05 SS G_CDS: -4.54 Total: -4.49 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -0.13 Total: -0.11 kcal Atomic # 8 Polarization: -3.48 SS G_CDS: -0.36 Total: -3.85 kcal Atomic # 14 Polarization: -0.06 SS G_CDS: -5.06 Total: -5.12 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -10.14 -10.89 -21.02 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.132 kcal (2) G-P(sol) polarization free energy of solvation -10.138 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.994 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.885 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.024 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.109 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds