Wall clock time and date at job start Sun Mar 7 2021 04:33:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86304 * 109.46528 * 2 1 4 4 C 1.50700 * 109.47110 * 119.99856 * 2 1 3 5 5 C 1.34451 * 126.48104 * 254.97247 * 4 2 1 6 6 N 1.36563 * 109.98426 * 180.02562 * 5 4 2 7 7 C 1.37831 * 109.86026 * 0.02562 * 6 5 4 8 8 C 1.38643 * 133.38160 * 179.97438 * 7 6 5 9 9 C 1.39320 * 119.66991 * 180.02562 * 8 7 6 10 10 C 1.47572 * 119.83257 * 179.97438 * 9 8 7 11 11 O 1.21591 * 120.00557 * 359.97438 * 10 9 8 12 12 N 1.34781 * 119.99679 * 180.02562 * 10 9 8 13 13 C 1.46504 * 119.99665 * 179.97438 * 12 10 9 14 14 H 1.08999 * 112.85136 * 336.19533 * 13 12 10 15 15 C 1.53779 * 113.61484 * 107.49929 * 13 12 10 16 16 C 1.53785 * 87.08093 * 89.11287 * 15 13 12 17 17 H 1.09002 * 113.61570 * 270.88522 * 16 15 13 18 18 C 1.52995 * 113.69093 * 139.99088 * 16 15 13 19 19 N 1.46500 * 109.47108 * 85.93603 * 18 16 15 20 20 C 1.34957 * 126.03656 * 124.71979 * 19 18 16 21 21 C 1.35318 * 107.74253 * 179.83870 * 20 19 18 22 22 C 1.39864 * 107.92189 * 0.42193 * 21 20 19 23 23 N 1.30845 * 108.20544 * 359.73636 * 22 21 20 24 24 C 1.53781 * 87.08241 * 25.43228 * 16 15 13 25 25 C 1.40199 * 120.33084 * 0.25766 * 9 8 7 26 26 C 1.36234 * 120.38146 * 359.45639 * 25 9 8 27 27 C 1.39878 * 119.95850 * 0.56288 * 26 25 9 28 28 H 0.96694 * 113.99976 * 60.00119 * 1 2 3 29 29 H 1.08995 * 109.47033 * 240.00406 * 2 1 3 30 30 H 1.48492 * 110.00233 * 60.00185 * 3 2 1 31 31 H 1.48506 * 109.99278 * 181.32123 * 3 2 1 32 32 H 1.07998 * 125.01146 * 0.06741 * 5 4 2 33 33 H 0.96999 * 125.07491 * 180.02562 * 6 5 4 34 34 H 1.08007 * 120.16522 * 0.02744 * 8 7 6 35 35 H 0.96996 * 120.00382 * 359.97438 * 12 10 9 36 36 H 1.09003 * 113.61775 * 334.57164 * 15 13 12 37 37 H 1.08996 * 113.61960 * 203.65890 * 15 13 12 38 38 H 1.09005 * 109.47501 * 205.93599 * 18 16 15 39 39 H 1.09004 * 109.47494 * 325.93611 * 18 16 15 40 40 H 1.07997 * 126.12591 * 359.97438 * 20 19 18 41 41 H 1.07997 * 126.03611 * 180.15339 * 21 20 19 42 42 H 1.07996 * 125.89869 * 179.75774 * 22 21 20 43 43 H 1.09005 * 113.61302 * 89.11252 * 24 16 15 44 44 H 1.08996 * 113.61527 * 219.93415 * 24 16 15 45 45 H 1.07999 * 119.80666 * 179.72439 * 25 9 8 46 46 H 1.07999 * 120.01907 * 180.23538 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.4621 -0.1363 2.3243 6 7 2.8043 -1.0946 3.2350 7 6 2.4958 -2.3431 2.7392 8 6 2.6330 -3.6279 3.2418 9 6 2.2157 -4.7156 2.4777 10 6 2.3606 -6.0848 3.0090 11 8 2.8435 -6.2615 4.1108 12 7 1.9585 -7.1394 2.2724 13 6 2.1028 -8.4987 2.7997 14 1 2.8825 -8.5783 3.5571 15 6 0.7698 -9.1431 3.2151 16 6 0.6587 -9.6580 1.7702 17 1 0.1566 -8.9636 1.0966 18 6 0.1156 -11.0845 1.6660 19 7 -1.3489 -11.0496 1.6527 20 6 -2.1473 -11.5890 0.7078 21 6 -3.4300 -11.3443 1.0629 22 6 -3.4146 -10.6227 2.2609 23 7 -2.1677 -10.4455 2.6155 24 6 2.1931 -9.5768 1.7068 25 6 1.6643 -4.5163 1.2042 26 6 1.5206 -3.2569 0.7051 27 6 1.9352 -2.1548 1.4600 28 1 -0.3933 0.4417 -0.7650 29 1 1.7924 -0.5137 -0.8900 30 1 1.5614 2.4679 1.2084 31 1 3.5345 1.7704 -0.0322 32 1 2.5972 0.9262 2.4627 33 1 3.2048 -0.9225 4.1015 34 1 3.0612 -3.7848 4.2209 35 1 1.5735 -6.9986 1.3933 36 1 -0.0009 -8.4195 3.4811 37 1 0.8799 -9.9366 3.9541 38 1 0.4765 -11.5444 0.7460 39 1 0.4574 -11.6669 2.5217 40 1 -1.8211 -12.1223 -0.1728 41 1 -4.3098 -11.6484 0.5155 42 1 -4.2822 -10.2725 2.8004 43 1 2.6924 -10.4890 2.0336 44 1 2.5716 -9.2049 0.7547 45 1 1.3477 -5.3659 0.6174 46 1 1.0916 -3.1099 -0.2751 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:31 Heat of formation + Delta-G solvation = 110.268779 kcal Electronic energy + Delta-G solvation = -29651.931584 eV Core-core repulsion = 25511.574712 eV Total energy + Delta-G solvation = -4140.356872 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.153 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.49241 -42.03235 -41.19495 -39.54613 -37.78597 -37.45016 -35.03889 -33.45592 -33.35060 -30.96748 -30.78027 -30.55369 -28.51075 -26.77047 -26.48880 -25.19154 -23.83666 -23.63077 -21.89381 -21.63389 -21.52931 -20.61039 -20.32063 -19.29411 -18.40515 -18.30166 -18.05737 -17.35525 -17.03687 -16.49652 -16.14343 -15.90461 -15.65496 -15.54957 -15.35421 -15.06851 -15.01743 -14.87865 -14.77853 -14.69916 -14.53991 -14.29682 -13.82775 -13.72430 -13.58793 -13.44017 -13.23546 -12.92973 -12.60731 -12.57149 -12.25914 -12.08577 -11.91288 -11.66131 -11.51743 -11.28022 -10.90585 -10.75988 -10.26157 -10.23699 -10.04049 -9.44024 -9.35824 -8.82655 -5.05217 -0.26436 0.39331 1.05420 1.26432 1.31907 1.61995 1.62473 1.84803 1.92620 2.01165 2.03780 2.20135 2.92792 3.25094 3.38357 3.51560 3.56602 3.58991 3.69030 3.73098 3.79404 3.96389 3.98423 3.99836 4.07873 4.10364 4.23085 4.28102 4.35154 4.37848 4.45531 4.56015 4.58206 4.66125 4.70874 4.75821 4.79313 4.91237 4.97640 4.98798 5.09539 5.13376 5.18348 5.23734 5.42553 5.45454 5.59134 5.60099 5.81545 5.97482 6.14236 6.34318 6.49959 6.69564 6.87287 7.25417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.034 4.034 3 Si 0.685 3.315 4 C -0.163 4.163 5 C 0.072 3.928 6 N -0.583 5.583 7 C 0.083 3.917 8 C -0.055 4.055 9 C -0.120 4.120 10 C 0.567 3.433 11 O -0.536 6.536 12 N -0.709 5.709 13 C 0.119 3.881 14 H 0.107 0.893 15 C -0.133 4.133 16 C -0.122 4.122 17 H 0.094 0.906 18 C 0.142 3.858 19 N -0.372 5.372 20 C 0.049 3.951 21 C -0.275 4.275 22 C 0.041 3.959 23 N -0.288 5.288 24 C -0.138 4.138 25 C -0.113 4.113 26 C -0.070 4.070 27 C -0.062 4.062 28 H 0.379 0.621 29 H 0.071 0.929 30 H -0.253 1.253 31 H -0.256 1.256 32 H 0.170 0.830 33 H 0.423 0.577 34 H 0.137 0.863 35 H 0.401 0.599 36 H 0.076 0.924 37 H 0.093 0.907 38 H 0.097 0.903 39 H 0.087 0.913 40 H 0.172 0.828 41 H 0.146 0.854 42 H 0.182 0.818 43 H 0.101 0.899 44 H 0.079 0.921 45 H 0.126 0.874 46 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.360 1.099 -7.146 7.239 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.145 4.145 3 Si 0.585 3.415 4 C -0.171 4.171 5 C -0.057 4.057 6 N -0.185 5.185 7 C -0.024 4.024 8 C -0.076 4.076 9 C -0.125 4.125 10 C 0.355 3.645 11 O -0.413 6.413 12 N -0.360 5.360 13 C 0.013 3.987 14 H 0.125 0.875 15 C -0.172 4.172 16 C -0.141 4.141 17 H 0.112 0.888 18 C 0.021 3.979 19 N -0.154 5.154 20 C -0.097 4.097 21 C -0.304 4.304 22 C -0.145 4.145 23 N -0.110 5.110 24 C -0.176 4.176 25 C -0.133 4.133 26 C -0.088 4.088 27 C -0.067 4.067 28 H 0.226 0.774 29 H 0.089 0.911 30 H -0.178 1.178 31 H -0.180 1.180 32 H 0.187 0.813 33 H 0.261 0.739 34 H 0.155 0.845 35 H 0.237 0.763 36 H 0.095 0.905 37 H 0.111 0.889 38 H 0.116 0.884 39 H 0.105 0.895 40 H 0.189 0.811 41 H 0.164 0.836 42 H 0.198 0.802 43 H 0.119 0.881 44 H 0.097 0.903 45 H 0.143 0.857 46 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 2.305 1.769 -4.371 5.249 hybrid contribution -0.649 -0.742 -0.559 1.133 sum 1.656 1.028 -4.930 5.301 Atomic orbital electron populations 1.86544 1.17573 1.81730 1.49423 1.23940 0.85281 1.09208 0.96081 0.95091 0.80831 0.77608 0.87927 1.19614 1.09427 0.91478 0.96564 1.21648 1.00577 0.94123 0.89329 1.41673 1.54801 1.04009 1.18033 1.18071 1.03252 0.86259 0.94794 1.20071 0.99418 0.87954 1.00172 1.19403 1.05029 0.92267 0.95786 1.18126 0.77257 0.84484 0.84588 1.90795 1.44346 1.86107 1.20047 1.45534 1.64215 1.05337 1.20924 1.21847 0.99132 0.80585 0.97100 0.87501 1.23393 0.97437 1.00710 0.95636 1.22904 0.95941 0.95828 0.99448 0.88757 1.21785 0.74272 0.97943 1.03925 1.48749 1.06324 1.42667 1.17679 1.22602 0.91394 1.00114 0.95564 1.21551 0.97031 1.10881 1.00940 1.23948 0.95326 0.98791 0.96466 1.77411 1.01807 1.19065 1.12703 1.23356 0.94960 0.99553 0.99755 1.20667 1.00629 0.97271 0.94703 1.20168 0.98604 0.90360 0.99694 1.19151 1.01008 0.92850 0.93682 0.77356 0.91118 1.17801 1.18039 0.81304 0.73945 0.84504 0.76334 0.90503 0.88898 0.88439 0.89452 0.81088 0.83599 0.80154 0.88092 0.90269 0.85667 0.85121 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.20 12.86 -35.23 -0.45 -0.65 16 2 C -0.03 0.00 3.05 36.01 0.11 0.11 16 3 Si 0.68 -1.18 30.79 -169.99 -5.23 -6.42 16 4 C -0.16 -0.40 5.61 -102.74 -0.58 -0.98 16 5 C 0.07 0.10 10.43 -16.78 -0.17 -0.08 16 6 N -0.58 -0.58 6.07 -10.68 -0.06 -0.65 16 7 C 0.08 0.25 7.26 -84.00 -0.61 -0.36 16 8 C -0.05 -0.18 9.61 -39.03 -0.37 -0.55 16 9 C -0.12 -0.35 5.87 -104.95 -0.62 -0.96 16 10 C 0.57 2.11 7.76 -12.45 -0.10 2.02 16 11 O -0.54 -3.88 15.91 5.29 0.08 -3.79 16 12 N -0.71 -0.46 5.21 -54.04 -0.28 -0.74 16 13 C 0.12 0.02 4.32 -67.11 -0.29 -0.27 16 14 H 0.11 0.19 7.46 -51.93 -0.39 -0.20 16 15 C -0.13 -0.06 7.43 -25.92 -0.19 -0.25 16 16 C -0.12 0.20 3.70 -89.81 -0.33 -0.14 16 17 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 18 C 0.14 -0.24 6.34 -4.04 -0.03 -0.27 16 19 N -0.37 -0.47 3.68 -61.36 -0.23 -0.70 16 20 C 0.05 0.01 11.45 -17.22 -0.20 -0.18 16 21 C -0.27 -0.31 10.80 -40.01 -0.43 -0.74 16 22 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 23 N -0.29 -1.05 12.42 30.62 0.38 -0.67 16 24 C -0.14 0.37 7.39 -25.92 -0.19 0.18 16 25 C -0.11 -0.12 9.46 -39.57 -0.37 -0.49 16 26 C -0.07 -0.13 10.03 -39.69 -0.40 -0.53 16 27 C -0.06 -0.21 6.35 -105.05 -0.67 -0.87 16 28 H 0.38 -1.82 8.74 45.56 0.40 -1.42 16 29 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 30 H -0.25 -0.23 7.04 56.52 0.40 0.17 16 31 H -0.26 -0.22 7.11 56.52 0.40 0.19 16 32 H 0.17 -0.12 6.30 -52.49 -0.33 -0.45 16 33 H 0.42 -0.83 8.96 -40.82 -0.37 -1.19 16 34 H 0.14 0.41 7.62 -52.48 -0.40 0.01 16 35 H 0.40 -0.66 6.69 -40.82 -0.27 -0.93 16 36 H 0.08 0.22 8.14 -51.93 -0.42 -0.21 16 37 H 0.09 0.03 7.92 -51.93 -0.41 -0.38 16 38 H 0.10 -0.40 8.07 -51.93 -0.42 -0.82 16 39 H 0.09 -0.16 7.88 -51.93 -0.41 -0.57 16 40 H 0.17 -0.52 8.06 -52.49 -0.42 -0.94 16 41 H 0.15 -0.09 8.06 -52.49 -0.42 -0.52 16 42 H 0.18 -0.02 8.06 -52.49 -0.42 -0.45 16 43 H 0.10 -0.39 8.10 -51.93 -0.42 -0.81 16 44 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 45 H 0.13 -0.23 6.36 -52.49 -0.33 -0.57 16 46 H 0.13 0.01 8.06 -52.49 -0.42 -0.42 16 LS Contribution 388.69 15.07 5.86 5.86 Total: 0.00 -11.94 388.69 -11.51 -23.45 By element: Atomic # 1 Polarization: -5.28 SS G_CDS: -5.93 Total: -11.21 kcal Atomic # 6 Polarization: 1.17 SS G_CDS: -5.65 Total: -4.48 kcal Atomic # 7 Polarization: -2.57 SS G_CDS: -0.19 Total: -2.76 kcal Atomic # 8 Polarization: -4.08 SS G_CDS: -0.37 Total: -4.45 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.23 Total: -6.42 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -11.94 -11.51 -23.45 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 133.722 kcal (2) G-P(sol) polarization free energy of solvation -11.941 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 121.782 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.454 kcal (6) G-S(sol) free energy of system = (1) + (5) 110.269 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds