Wall clock time and date at job start Sun Mar 7 2021 04:33:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.37930 * 119.92455 * 64.72440 * 4 2 1 6 6 C 1.39605 * 119.87201 * 179.72784 * 5 4 2 7 7 C 1.47851 * 120.13892 * 180.27247 * 6 5 4 8 8 O 1.21560 * 120.00002 * 0.25079 * 7 6 5 9 9 N 1.34773 * 120.00354 * 180.24785 * 7 6 5 10 10 C 1.46493 * 120.00642 * 180.02562 * 9 7 6 11 11 H 1.09002 * 112.84561 * 334.67062 * 10 9 7 12 12 C 1.53774 * 113.61846 * 105.86159 * 10 9 7 13 13 C 1.54050 * 86.98613 * 89.16447 * 12 10 9 14 14 H 1.09009 * 113.61265 * 270.88684 * 13 12 10 15 15 C 1.53001 * 113.69618 * 139.99360 * 13 12 10 16 16 N 1.46503 * 109.47427 * 87.46791 * 15 13 12 17 17 C 1.34942 * 126.03820 * 124.99844 * 16 15 13 18 18 C 1.35318 * 107.74572 * 179.97438 * 17 16 15 19 19 C 1.39864 * 107.92065 * 359.97438 * 18 17 16 20 20 N 1.30838 * 108.20121 * 359.74741 * 19 18 17 21 21 C 1.53776 * 87.07630 * 25.43168 * 13 12 10 22 22 C 1.39534 * 119.72142 * 0.52212 * 6 5 4 23 23 C 1.38073 * 119.84326 * 359.75157 * 22 6 5 24 24 Br 1.89102 * 119.93924 * 179.97438 * 23 22 6 25 25 C 1.38364 * 119.91781 * 244.99566 * 4 2 1 26 26 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 27 27 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 28 28 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 29 29 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 30 30 H 1.07999 * 120.06466 * 359.97438 * 5 4 2 31 31 H 0.97003 * 119.99364 * 0.02562 * 9 7 6 32 32 H 1.09002 * 113.62214 * 203.66928 * 12 10 9 33 33 H 1.09004 * 113.61636 * 334.57440 * 12 10 9 34 34 H 1.08998 * 109.46917 * 207.46569 * 15 13 12 35 35 H 1.08997 * 109.47027 * 327.46455 * 15 13 12 36 36 H 1.07997 * 126.12570 * 0.02562 * 17 16 15 37 37 H 1.08001 * 126.03647 * 180.02562 * 18 17 16 38 38 H 1.07996 * 125.89855 * 179.97438 * 19 18 17 39 39 H 1.08997 * 113.61783 * 220.01966 * 21 13 12 40 40 H 1.09000 * 113.61343 * 89.12075 * 21 13 12 41 41 H 1.08003 * 120.08382 * 179.72960 * 22 6 5 42 42 H 1.08008 * 119.86350 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 1.6795 -2.0561 1.3988 6 6 2.1502 -2.7146 2.5363 7 6 1.8888 -4.1581 2.7200 8 8 1.2668 -4.7752 1.8774 9 7 2.3403 -4.7899 3.8215 10 6 2.0818 -6.2204 4.0033 11 1 1.1962 -6.5619 3.4674 12 6 3.3193 -7.1040 3.7743 13 6 3.6302 -6.9157 5.2713 14 1 4.2459 -6.0413 5.4827 15 6 4.1432 -8.1835 5.9570 16 7 5.5986 -8.2639 5.8094 17 6 6.4925 -8.3912 6.8122 18 6 7.7278 -8.4296 6.2612 19 6 7.5838 -8.3226 4.8741 20 7 6.3075 -8.2290 4.6017 21 6 2.1252 -6.6724 5.4726 22 6 2.8640 -2.0034 3.5016 23 6 3.1046 -0.6555 3.3238 24 35 4.0709 0.3111 4.6307 25 6 2.6393 -0.0102 2.1910 26 1 -0.3934 0.4418 -0.7650 27 1 1.7923 -0.5137 -0.8901 28 1 1.5616 2.4678 1.2086 29 1 3.5346 1.7703 -0.0322 30 1 1.1226 -2.6002 0.6503 31 1 2.8364 -4.2974 4.4940 32 1 3.0779 -8.1322 3.5045 33 1 4.0603 -6.6548 3.1132 34 1 3.8867 -8.1530 7.0160 35 1 3.6825 -9.0574 5.4966 36 1 6.2630 -8.4524 7.8658 37 1 8.6601 -8.5266 6.7977 38 1 8.3871 -8.3216 4.1523 39 1 1.9027 -5.8749 6.1815 40 1 1.5578 -7.5827 5.6663 41 1 3.2271 -2.5060 4.3859 42 1 2.8297 1.0444 2.0565 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:58 Heat of formation + Delta-G solvation = 80.578563 kcal Electronic energy + Delta-G solvation = -26991.835496 eV Core-core repulsion = 22987.788967 eV Total energy + Delta-G solvation = -4004.046528 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.052 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.10943 -41.67423 -40.59834 -39.21690 -37.70614 -35.22477 -33.88113 -33.71127 -32.72966 -30.94219 -30.55533 -28.68414 -27.06952 -26.85288 -25.73902 -24.01127 -22.74059 -21.93857 -21.70853 -21.58586 -20.43643 -18.96517 -18.55694 -18.22822 -17.76972 -17.46382 -16.72769 -16.53875 -16.19822 -16.06085 -15.75677 -15.32876 -15.22519 -15.00503 -14.84896 -14.80795 -14.47215 -14.33737 -14.16888 -13.77642 -13.67445 -13.60014 -13.50153 -12.94539 -12.72132 -12.45839 -12.34259 -12.12515 -11.94395 -11.75549 -11.57083 -11.55390 -11.34957 -11.08742 -10.55046 -10.33172 -10.29925 -10.12641 -9.96457 -9.48148 -5.10434 -0.56182 -0.21995 0.33228 1.01254 1.11632 1.48846 1.56372 1.58374 1.82115 1.89360 1.99738 2.43966 3.06497 3.17369 3.26676 3.31957 3.50766 3.54998 3.63122 3.68894 3.81187 3.91281 3.91843 3.94510 4.04497 4.05014 4.21188 4.23736 4.30001 4.40398 4.50723 4.59211 4.64629 4.68702 4.72108 4.84542 4.87734 4.91736 4.98170 5.03761 5.05507 5.14528 5.31627 5.45928 5.77403 6.09975 6.29587 6.49550 6.82976 7.04495 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.073 4.073 3 Si 0.682 3.318 4 C -0.073 4.073 5 C -0.013 4.013 6 C -0.126 4.126 7 C 0.566 3.434 8 O -0.523 6.523 9 N -0.708 5.708 10 C 0.118 3.882 11 H 0.108 0.892 12 C -0.133 4.133 13 C -0.122 4.122 14 H 0.094 0.906 15 C 0.142 3.858 16 N -0.372 5.372 17 C 0.050 3.950 18 C -0.274 4.274 19 C 0.041 3.959 20 N -0.289 5.289 21 C -0.137 4.137 22 C -0.054 4.054 23 C -0.093 4.093 24 Br -0.032 7.032 25 C -0.070 4.070 26 H 0.386 0.614 27 H 0.082 0.918 28 H -0.246 1.246 29 H -0.250 1.250 30 H 0.151 0.849 31 H 0.400 0.600 32 H 0.094 0.906 33 H 0.076 0.924 34 H 0.098 0.902 35 H 0.088 0.912 36 H 0.172 0.828 37 H 0.146 0.854 38 H 0.182 0.818 39 H 0.079 0.921 40 H 0.103 0.897 41 H 0.139 0.861 42 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.055 1.372 1.437 1.988 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.183 4.183 3 Si 0.582 3.418 4 C -0.075 4.075 5 C -0.032 4.032 6 C -0.130 4.130 7 C 0.353 3.647 8 O -0.399 6.399 9 N -0.360 5.360 10 C 0.013 3.987 11 H 0.126 0.874 12 C -0.171 4.171 13 C -0.141 4.141 14 H 0.112 0.888 15 C 0.021 3.979 16 N -0.155 5.155 17 C -0.096 4.096 18 C -0.304 4.304 19 C -0.145 4.145 20 N -0.111 5.111 21 C -0.176 4.176 22 C -0.074 4.074 23 C -0.173 4.173 24 Br 0.054 6.946 25 C -0.089 4.089 26 H 0.234 0.766 27 H 0.100 0.900 28 H -0.170 1.170 29 H -0.174 1.174 30 H 0.168 0.832 31 H 0.235 0.765 32 H 0.113 0.887 33 H 0.095 0.905 34 H 0.116 0.884 35 H 0.106 0.894 36 H 0.189 0.811 37 H 0.164 0.836 38 H 0.199 0.801 39 H 0.098 0.902 40 H 0.121 0.879 41 H 0.156 0.844 42 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -0.604 1.677 1.418 2.278 hybrid contribution 0.924 -0.581 1.079 1.535 sum 0.320 1.097 2.497 2.746 Atomic orbital electron populations 1.86494 1.16633 1.81931 1.49920 1.24661 0.86254 1.10582 0.96818 0.95039 0.81106 0.77947 0.87703 1.19324 0.98755 0.93876 0.95499 1.21284 0.93238 0.93012 0.95714 1.19945 1.02564 0.93764 0.96769 1.18038 0.78819 0.86168 0.81664 1.90824 1.39732 1.67124 1.42218 1.45554 1.57590 1.09902 1.22913 1.21878 0.99715 0.79957 0.97132 0.87352 1.23447 0.97480 1.00690 0.95527 1.22959 0.96176 0.97662 0.97346 0.88778 1.21781 0.74970 0.99035 1.02136 1.48743 1.06455 1.56154 1.04108 1.22602 0.89956 1.01933 0.95143 1.21557 0.97946 1.16492 0.94401 1.23947 0.94362 0.99866 0.96315 1.77400 1.05304 1.23843 1.04509 1.23353 0.95244 1.02742 0.96236 1.21255 0.95625 0.92196 0.98333 1.21584 1.04101 0.95137 0.96440 1.96832 1.72331 1.73700 1.51780 1.21106 0.96204 0.99547 0.92048 0.76550 0.89977 1.17049 1.17442 0.83178 0.76450 0.88737 0.90486 0.88398 0.89403 0.81075 0.83580 0.80138 0.90240 0.87905 0.84352 0.84812 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.13 12.80 -35.23 -0.45 -0.32 16 2 C -0.07 0.04 2.79 36.00 0.10 0.14 16 3 Si 0.68 -1.07 29.84 -169.99 -5.07 -6.14 16 4 C -0.07 -0.13 5.38 -104.69 -0.56 -0.70 16 5 C -0.01 -0.03 9.22 -39.18 -0.36 -0.39 16 6 C -0.13 -0.25 5.87 -104.97 -0.62 -0.86 16 7 C 0.57 1.58 7.77 -12.33 -0.10 1.49 16 8 O -0.52 -3.28 15.97 5.31 0.08 -3.19 16 9 N -0.71 0.07 5.21 -53.97 -0.28 -0.21 16 10 C 0.12 -0.07 4.29 -67.13 -0.29 -0.35 16 11 H 0.11 0.10 7.50 -51.93 -0.39 -0.29 16 12 C -0.13 0.03 7.45 -25.78 -0.19 -0.16 16 13 C -0.12 0.25 3.72 -89.67 -0.33 -0.09 16 14 H 0.09 -0.11 8.14 -51.92 -0.42 -0.53 16 15 C 0.14 -0.29 6.35 -4.04 -0.03 -0.31 16 16 N -0.37 -0.37 3.68 -61.37 -0.23 -0.60 16 17 C 0.05 0.00 11.45 -17.23 -0.20 -0.19 16 18 C -0.27 -0.26 10.80 -40.01 -0.43 -0.69 16 19 C 0.04 0.08 12.03 -17.37 -0.21 -0.13 16 20 N -0.29 -0.96 12.42 30.62 0.38 -0.58 16 21 C -0.14 0.44 7.38 -25.92 -0.19 0.25 16 22 C -0.05 -0.03 9.28 -39.16 -0.36 -0.39 16 23 C -0.09 -0.14 6.22 -39.57 -0.25 -0.39 16 24 Br -0.03 -0.04 33.69 -68.01 -2.29 -2.33 16 25 C -0.07 -0.14 8.40 -39.47 -0.33 -0.47 16 26 H 0.39 -2.05 8.74 45.56 0.40 -1.65 16 27 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 28 H -0.25 -0.34 7.05 56.52 0.40 0.06 16 29 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 30 H 0.15 0.40 7.65 -52.49 -0.40 -0.01 16 31 H 0.40 -0.91 6.74 -40.82 -0.28 -1.19 16 32 H 0.09 -0.03 7.91 -51.93 -0.41 -0.44 16 33 H 0.08 0.16 8.14 -51.93 -0.42 -0.26 16 34 H 0.10 -0.43 8.07 -51.93 -0.42 -0.85 16 35 H 0.09 -0.19 7.85 -51.93 -0.41 -0.60 16 36 H 0.17 -0.54 8.06 -52.49 -0.42 -0.97 16 37 H 0.15 -0.11 8.06 -52.49 -0.42 -0.54 16 38 H 0.18 -0.07 8.06 -52.49 -0.42 -0.50 16 39 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 40 H 0.10 -0.44 8.10 -51.93 -0.42 -0.86 16 41 H 0.14 -0.27 6.41 -52.48 -0.34 -0.61 16 42 H 0.13 0.21 4.85 -52.48 -0.25 -0.05 16 LS Contribution 376.56 15.07 5.67 5.67 Total: 0.00 -9.74 376.56 -11.60 -21.34 By element: Atomic # 1 Polarization: -5.33 SS G_CDS: -5.07 Total: -10.40 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -4.35 Total: -3.25 kcal Atomic # 7 Polarization: -1.26 SS G_CDS: -0.13 Total: -1.39 kcal Atomic # 8 Polarization: -3.14 SS G_CDS: -0.37 Total: -3.51 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.07 Total: -6.14 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.29 Total: -2.33 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -9.74 -11.60 -21.34 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 101.920 kcal (2) G-P(sol) polarization free energy of solvation -9.745 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.175 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.597 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.341 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.579 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds