Wall clock time and date at job start Sun Mar 7 2021 04:34:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86295 * 109.46915 * 2 1 4 4 C 1.50698 * 109.47321 * 239.99522 * 2 1 3 5 5 C 1.38409 * 119.82460 * 119.72167 * 4 2 1 6 6 C 1.37882 * 120.16839 * 179.76599 * 5 4 2 7 7 C 1.39836 * 119.82983 * 0.53342 * 6 5 4 8 8 C 1.47200 * 120.17373 * 179.70142 * 7 6 5 9 9 C 1.34810 * 120.00057 * 0.02562 * 8 7 6 10 10 C 1.46425 * 120.00181 * 180.02562 * 9 8 7 11 11 O 1.21698 * 120.00020 * 0.02562 * 10 9 8 12 12 N 1.34780 * 120.00077 * 180.02562 * 10 9 8 13 13 C 1.46494 * 119.99903 * 180.02562 * 12 10 9 14 14 H 1.09001 * 112.85080 * 336.19163 * 13 12 10 15 15 C 1.53784 * 113.61798 * 107.50068 * 13 12 10 16 16 C 1.53785 * 87.08062 * 89.11577 * 15 13 12 17 17 H 1.09006 * 113.68982 * 270.87848 * 16 15 13 18 18 C 1.52995 * 113.61614 * 139.98679 * 16 15 13 19 19 N 1.46499 * 109.47229 * 87.49910 * 18 16 15 20 20 C 1.34953 * 126.03340 * 124.71714 * 19 18 16 21 21 C 1.35321 * 107.74260 * 179.83903 * 20 19 18 22 22 C 1.39872 * 107.91829 * 0.42546 * 21 20 19 23 23 N 1.30839 * 108.20463 * 359.73530 * 22 21 20 24 24 C 1.53785 * 113.61516 * 205.00018 * 13 12 10 25 25 C 1.39843 * 119.65846 * 359.72417 * 7 6 5 26 26 C 1.37893 * 119.82453 * 0.02562 * 25 7 6 27 27 H 0.96696 * 114.00036 * 60.00219 * 1 2 3 28 28 H 1.09001 * 109.47103 * 119.99412 * 2 1 3 29 29 H 1.48496 * 110.00262 * 59.99721 * 3 2 1 30 30 H 1.48497 * 109.99780 * 181.31712 * 3 2 1 31 31 H 1.08000 * 119.91241 * 0.02652 * 5 4 2 32 32 H 1.07998 * 120.08951 * 180.25860 * 6 5 4 33 33 H 1.08006 * 120.00433 * 180.02562 * 8 7 6 34 34 H 1.07997 * 119.99737 * 0.02562 * 9 8 7 35 35 H 0.97000 * 120.00217 * 359.97438 * 12 10 9 36 36 H 1.08994 * 113.61506 * 203.66120 * 15 13 12 37 37 H 1.08999 * 113.60960 * 334.57019 * 15 13 12 38 38 H 1.09001 * 109.47038 * 207.50427 * 18 16 15 39 39 H 1.09003 * 109.46613 * 327.50133 * 18 16 15 40 40 H 1.07991 * 126.12976 * 0.02562 * 20 19 18 41 41 H 1.07996 * 126.04132 * 180.16045 * 21 20 19 42 42 H 1.08002 * 125.89521 * 179.76311 * 22 21 20 43 43 H 1.09005 * 113.61429 * 25.42848 * 24 13 12 44 44 H 1.08999 * 113.62033 * 156.33498 * 24 13 12 45 45 H 1.07996 * 120.08750 * 180.02562 * 25 7 6 46 46 H 1.07993 * 119.91365 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7222 -0.0327 -2.1420 6 6 3.1897 -0.6773 -3.2677 7 6 2.8537 -2.0159 -3.4928 8 6 3.3433 -2.7094 -4.6953 9 6 4.1180 -2.0542 -5.5829 10 6 4.6045 -2.7439 -6.7795 11 8 4.3090 -3.9085 -6.9729 12 7 5.3795 -2.0889 -7.6666 13 6 5.8657 -2.7788 -8.8640 14 1 5.9032 -3.8615 -8.7428 15 6 5.1730 -2.3258 -10.1601 16 6 6.2639 -1.2477 -10.2733 17 1 6.0121 -0.3152 -9.7681 18 6 6.7669 -1.0325 -11.7020 19 7 5.9192 -0.0450 -12.3746 20 6 6.3412 1.0926 -12.9655 21 6 5.2552 1.7224 -13.4705 22 6 4.1300 0.9480 -13.1696 23 7 4.5268 -0.1117 -12.5127 24 6 7.1596 -2.1781 -9.4384 25 6 2.0499 -2.6922 -2.5697 26 6 1.5944 -2.0354 -1.4461 27 1 -0.3933 0.4417 -0.7650 28 1 1.7924 -0.5137 0.8900 29 1 1.5614 2.4679 1.2084 30 1 3.5345 1.7703 -0.0321 31 1 2.9771 1.0024 -1.9690 32 1 3.8100 -0.1484 -3.9761 33 1 3.0818 -3.7433 -4.8666 34 1 4.3798 -1.0206 -5.4114 35 1 5.6147 -1.1606 -7.5126 36 1 5.2089 -3.0685 -10.9569 37 1 4.1735 -1.9206 -10.0023 38 1 7.7948 -0.6706 -11.6747 39 1 6.7282 -1.9758 -12.2468 40 1 7.3629 1.4369 -13.0273 41 1 5.2564 2.6598 -14.0069 42 1 3.1098 1.1838 -13.4342 43 1 7.7638 -1.6538 -8.6980 44 1 7.7385 -2.8805 -10.0380 45 1 1.7866 -3.7262 -2.7364 46 1 0.9733 -2.5562 -0.7325 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:34:06 Heat of formation + Delta-G solvation = 87.060837 kcal Electronic energy + Delta-G solvation = -27190.401241 eV Core-core repulsion = 23242.690049 eV Total energy + Delta-G solvation = -3947.711192 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.157 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.06943 -41.23895 -40.67850 -39.43492 -37.81849 -35.12165 -34.98983 -33.42769 -32.28942 -31.29963 -30.91798 -28.69608 -27.18600 -26.80567 -24.83508 -24.11717 -23.59705 -22.17522 -21.92117 -21.60163 -20.51857 -20.30310 -18.92146 -18.29723 -18.03628 -17.30259 -16.89606 -16.66335 -16.41444 -16.22564 -16.02960 -15.75859 -15.59680 -15.21673 -15.07633 -14.92839 -14.72129 -14.64724 -14.40743 -14.15814 -13.90833 -13.74077 -13.60790 -13.47894 -13.33545 -13.04284 -12.91561 -12.30520 -12.28696 -12.06056 -11.77195 -11.70680 -11.55312 -11.37621 -11.31501 -10.93766 -10.50098 -10.29488 -10.07767 -10.06487 -9.47293 -9.30296 -5.10474 -0.59415 0.30298 0.87468 1.02100 1.22045 1.56177 1.59114 1.91014 2.00424 2.10809 2.26700 2.75366 3.21365 3.35486 3.36581 3.48800 3.55942 3.58550 3.70344 3.74725 3.80910 3.93353 3.96331 4.06738 4.08844 4.13978 4.24737 4.25065 4.32571 4.36918 4.44572 4.54865 4.62643 4.71936 4.73625 4.76267 4.87544 4.88502 4.93730 5.00763 5.06789 5.07806 5.09805 5.15199 5.30980 5.40049 5.53862 5.56650 5.78282 5.80869 6.10911 6.48107 6.49780 6.83924 7.23841 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.071 4.071 3 Si 0.689 3.311 4 C -0.108 4.108 5 C -0.120 4.120 6 C -0.095 4.095 7 C -0.073 4.073 8 C -0.014 4.014 9 C -0.215 4.215 10 C 0.551 3.449 11 O -0.541 6.541 12 N -0.709 5.709 13 C 0.118 3.882 14 H 0.106 0.894 15 C -0.133 4.133 16 C -0.121 4.121 17 H 0.094 0.906 18 C 0.142 3.858 19 N -0.372 5.372 20 C 0.049 3.951 21 C -0.275 4.275 22 C 0.041 3.959 23 N -0.289 5.289 24 C -0.138 4.138 25 C -0.092 4.092 26 C -0.095 4.095 27 H 0.380 0.620 28 H 0.115 0.885 29 H -0.254 1.254 30 H -0.258 1.258 31 H 0.130 0.870 32 H 0.131 0.869 33 H 0.138 0.862 34 H 0.130 0.870 35 H 0.401 0.599 36 H 0.092 0.908 37 H 0.076 0.924 38 H 0.097 0.903 39 H 0.087 0.913 40 H 0.172 0.828 41 H 0.146 0.854 42 H 0.182 0.818 43 H 0.078 0.922 44 H 0.100 0.900 45 H 0.132 0.868 46 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.353 4.716 -1.703 6.032 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.182 4.182 3 Si 0.591 3.409 4 C -0.108 4.108 5 C -0.137 4.137 6 C -0.113 4.113 7 C -0.073 4.073 8 C -0.034 4.034 9 C -0.236 4.236 10 C 0.341 3.659 11 O -0.419 6.419 12 N -0.360 5.360 13 C 0.013 3.987 14 H 0.124 0.876 15 C -0.172 4.172 16 C -0.140 4.140 17 H 0.112 0.888 18 C 0.020 3.980 19 N -0.154 5.154 20 C -0.097 4.097 21 C -0.304 4.304 22 C -0.145 4.145 23 N -0.110 5.110 24 C -0.177 4.177 25 C -0.110 4.110 26 C -0.113 4.113 27 H 0.227 0.773 28 H 0.133 0.867 29 H -0.179 1.179 30 H -0.183 1.183 31 H 0.147 0.853 32 H 0.149 0.851 33 H 0.156 0.844 34 H 0.148 0.852 35 H 0.236 0.764 36 H 0.111 0.889 37 H 0.095 0.905 38 H 0.116 0.884 39 H 0.106 0.894 40 H 0.189 0.811 41 H 0.164 0.836 42 H 0.199 0.801 43 H 0.097 0.903 44 H 0.119 0.881 45 H 0.150 0.850 46 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 3.468 2.976 -0.229 4.575 hybrid contribution 0.586 0.803 -0.319 1.044 sum 4.054 3.778 -0.548 5.569 Atomic orbital electron populations 1.86515 1.16921 1.81697 1.49289 1.25103 0.85391 1.10202 0.97493 0.94706 0.80926 0.77961 0.87305 1.20532 0.98291 0.95230 0.96743 1.20952 0.98627 0.99535 0.94590 1.21351 0.98979 0.93775 0.97215 1.19065 0.99252 0.93970 0.95050 1.22416 0.91101 0.99628 0.90215 1.22867 1.03671 1.01111 0.95913 1.18328 0.78082 0.86412 0.83115 1.90839 1.57402 1.16712 1.76950 1.45527 1.52389 1.15466 1.22598 1.21833 0.94227 0.98308 0.84365 0.87574 1.23397 0.98954 0.97639 0.97207 1.22900 0.98008 0.98945 0.94185 0.88754 1.21794 0.92293 0.91599 0.92280 1.48750 1.05504 1.17588 1.43586 1.22605 1.00518 0.88547 0.98003 1.21557 0.91707 1.04746 1.12399 1.23952 1.00276 0.92588 0.97702 1.77404 0.89053 1.22618 1.21954 1.23360 0.96271 0.98892 0.99140 1.21473 0.95984 1.00112 0.93392 1.20993 0.99007 0.93810 0.97453 0.77281 0.86734 1.17891 1.18275 0.85279 0.85090 0.84415 0.85211 0.76434 0.88936 0.90540 0.88446 0.89439 0.81088 0.83587 0.80128 0.90322 0.88141 0.85024 0.85120 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.06 12.76 -35.23 -0.45 -0.39 16 2 C -0.07 0.05 2.82 36.00 0.10 0.15 16 3 Si 0.69 -1.03 29.77 -169.99 -5.06 -6.09 16 4 C -0.11 0.04 5.40 -104.50 -0.56 -0.53 16 5 C -0.12 0.13 8.65 -39.65 -0.34 -0.21 16 6 C -0.10 0.09 9.41 -39.11 -0.37 -0.28 16 7 C -0.07 0.00 5.87 -105.06 -0.62 -0.62 16 8 C -0.01 -0.01 9.46 -37.16 -0.35 -0.36 16 9 C -0.21 0.03 9.41 -37.50 -0.35 -0.32 16 10 C 0.55 1.16 7.74 -12.96 -0.10 1.06 16 11 O -0.54 -3.35 15.83 5.19 0.08 -3.27 16 12 N -0.71 0.39 5.26 -54.40 -0.29 0.10 16 13 C 0.12 -0.06 4.32 -67.12 -0.29 -0.35 16 14 H 0.11 0.14 7.46 -51.93 -0.39 -0.25 16 15 C -0.13 0.03 7.43 -25.91 -0.19 -0.16 16 16 C -0.12 0.26 3.70 -89.81 -0.33 -0.07 16 17 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 18 C 0.14 -0.30 6.35 -4.04 -0.03 -0.32 16 19 N -0.37 -0.31 3.68 -61.37 -0.23 -0.53 16 20 C 0.05 -0.01 11.45 -17.22 -0.20 -0.20 16 21 C -0.27 -0.19 10.80 -40.01 -0.43 -0.62 16 22 C 0.04 0.07 12.03 -17.36 -0.21 -0.14 16 23 N -0.29 -0.91 12.42 30.63 0.38 -0.53 16 24 C -0.14 0.44 7.39 -25.91 -0.19 0.25 16 25 C -0.09 0.00 9.80 -39.11 -0.38 -0.38 16 26 C -0.09 -0.01 9.59 -39.65 -0.38 -0.39 16 27 H 0.38 -1.49 8.70 45.56 0.40 -1.09 16 28 H 0.12 -0.02 7.96 -51.93 -0.41 -0.44 16 29 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 30 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 31 H 0.13 -0.38 4.85 -52.49 -0.25 -0.63 16 32 H 0.13 -0.41 6.17 -52.49 -0.32 -0.73 16 33 H 0.14 0.15 7.52 -52.48 -0.39 -0.24 16 34 H 0.13 -0.38 6.07 -52.49 -0.32 -0.70 16 35 H 0.40 -1.24 8.68 -40.82 -0.35 -1.59 16 36 H 0.09 -0.02 7.90 -51.93 -0.41 -0.43 16 37 H 0.08 0.16 8.14 -51.93 -0.42 -0.27 16 38 H 0.10 -0.43 8.07 -51.93 -0.42 -0.85 16 39 H 0.09 -0.19 7.84 -51.93 -0.41 -0.60 16 40 H 0.17 -0.58 8.06 -52.49 -0.42 -1.00 16 41 H 0.15 -0.16 8.06 -52.49 -0.42 -0.58 16 42 H 0.18 -0.13 8.06 -52.49 -0.42 -0.55 16 43 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 44 H 0.10 -0.42 8.10 -51.93 -0.42 -0.84 16 45 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 46 H 0.13 -0.05 8.06 -52.49 -0.42 -0.48 16 LS Contribution 389.58 15.07 5.87 5.87 Total: 0.00 -10.14 389.58 -11.21 -21.34 By element: Atomic # 1 Polarization: -6.72 SS G_CDS: -6.29 Total: -13.00 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -5.23 Total: -3.50 kcal Atomic # 7 Polarization: -0.83 SS G_CDS: -0.13 Total: -0.96 kcal Atomic # 8 Polarization: -3.29 SS G_CDS: -0.37 Total: -3.66 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: -5.06 Total: -6.09 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -10.14 -11.21 -21.34 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.402 kcal (2) G-P(sol) polarization free energy of solvation -10.136 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 98.267 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.206 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.341 kcal (6) G-S(sol) free energy of system = (1) + (5) 87.061 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds