Wall clock time and date at job start Sun Mar 7 2021 04:34:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86297 * 109.46638 * 2 1 4 4 C 1.50696 * 109.47284 * 119.99970 * 2 1 3 5 5 C 1.38194 * 119.84177 * 255.02493 * 4 2 1 6 6 C 1.38310 * 120.14341 * 179.74254 * 5 4 2 7 7 F 1.35103 * 120.08462 * 180.27211 * 6 5 4 8 8 C 1.39798 * 119.83353 * 0.48846 * 6 5 4 9 9 C 1.47694 * 120.15770 * 179.76247 * 8 6 5 10 10 O 1.21571 * 119.99819 * 359.72761 * 9 8 6 11 11 N 1.34776 * 120.00379 * 179.72168 * 9 8 6 12 12 C 1.46501 * 119.99996 * 179.97438 * 11 9 8 13 13 H 1.08998 * 112.85219 * 23.81145 * 12 11 9 14 14 C 1.53789 * 113.61291 * 155.00249 * 12 11 9 15 15 C 1.53780 * 87.07896 * 89.20051 * 14 12 11 16 16 H 1.09000 * 113.61752 * 270.80252 * 15 14 12 17 17 C 1.52999 * 113.61294 * 139.97876 * 15 14 12 18 18 N 1.46504 * 109.47110 * 174.99939 * 17 15 14 19 19 C 1.34951 * 126.03463 * 125.02908 * 18 17 15 20 20 C 1.35320 * 107.74569 * 180.02562 * 19 18 17 21 21 C 1.39866 * 107.91898 * 359.97438 * 20 19 18 22 22 N 1.30844 * 108.20609 * 0.02562 * 21 20 19 23 23 C 1.53777 * 113.69423 * 252.53684 * 12 11 9 24 24 C 1.39657 * 119.68949 * 359.49033 * 8 6 5 25 25 C 1.38071 * 119.85309 * 0.27917 * 24 8 6 26 26 F 1.35092 * 119.91615 * 180.02562 * 25 24 8 27 27 H 0.96697 * 113.99744 * 299.99607 * 1 2 3 28 28 H 1.09002 * 109.46993 * 240.00301 * 2 1 3 29 29 H 1.48504 * 110.00307 * 299.99833 * 3 2 1 30 30 H 1.48497 * 110.00329 * 61.32214 * 3 2 1 31 31 H 1.08000 * 119.92502 * 0.02562 * 5 4 2 32 32 H 0.96998 * 120.00155 * 0.02562 * 11 9 8 33 33 H 1.08998 * 113.61052 * 334.65487 * 14 12 11 34 34 H 1.08989 * 113.61467 * 203.74776 * 14 12 11 35 35 H 1.09001 * 109.46735 * 55.00412 * 17 15 14 36 36 H 1.08995 * 109.47484 * 295.00057 * 17 15 14 37 37 H 1.07996 * 126.12664 * 359.95494 * 19 18 17 38 38 H 1.07992 * 126.03988 * 180.02562 * 20 19 18 39 39 H 1.08004 * 125.89910 * 179.97438 * 21 20 19 40 40 H 1.09001 * 113.61651 * 156.32736 * 23 12 11 41 41 H 1.09003 * 113.61238 * 25.42698 * 23 12 11 42 42 H 1.08001 * 120.07517 * 180.25261 * 24 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4527 0.0199 2.2815 6 6 2.9106 -0.6253 3.4159 7 9 3.4149 0.0902 4.4450 8 6 2.8545 -2.0200 3.4932 9 6 3.3464 -2.7167 4.6990 10 8 3.8059 -2.0774 5.6254 11 7 3.2856 -4.0611 4.7726 12 6 3.7741 -4.7521 5.9685 13 1 3.7707 -4.1178 6.8549 14 6 3.1250 -6.1280 6.1932 15 6 4.2549 -6.7143 5.3304 16 1 4.0235 -6.7386 4.2655 17 6 4.7951 -8.0475 5.8516 18 7 5.7773 -8.5804 4.9041 19 6 7.0472 -8.9346 5.1921 20 6 7.6217 -9.3759 4.0492 21 6 6.6701 -9.2889 3.0278 22 7 5.5641 -8.8120 3.5391 23 6 5.0998 -5.5004 5.7516 24 6 2.3259 -2.7512 2.4272 25 6 1.8680 -2.0935 1.3028 26 9 1.3560 -2.7995 0.2711 27 1 -0.3933 0.4416 0.7651 28 1 1.7924 -0.5138 -0.8900 29 1 1.5614 2.4679 -1.2085 30 1 1.5878 2.4586 1.2242 31 1 2.4983 1.0971 2.2187 32 1 2.9192 -4.5712 4.0334 33 1 2.1371 -6.2235 5.7425 34 1 3.1516 -6.4591 7.2312 35 1 3.9732 -8.7553 5.9594 36 1 5.2711 -7.8931 6.8199 37 1 7.5206 -8.8753 6.1610 38 1 8.6355 -9.7330 3.9443 39 1 6.8222 -9.5666 1.9952 40 1 5.6664 -5.6600 6.6691 41 1 5.7063 -5.0893 4.9445 42 1 2.2758 -3.8286 2.4819 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:34:11 Heat of formation + Delta-G solvation = -7.925662 kcal Electronic energy + Delta-G solvation = -30052.155662 eV Core-core repulsion = 25445.181354 eV Total energy + Delta-G solvation = -4606.974308 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.123 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -50.10928 -50.01329 -42.12914 -41.57556 -40.46510 -39.35277 -37.80949 -35.26213 -33.93370 -32.88920 -31.43729 -30.98563 -28.83433 -27.76713 -26.94867 -24.77927 -24.48552 -23.65481 -22.19120 -21.93460 -21.65343 -20.34303 -19.80652 -18.89946 -18.58096 -18.26397 -17.95449 -17.41015 -17.12364 -16.91444 -16.61565 -16.46350 -16.31037 -16.04397 -15.91341 -15.74201 -15.63995 -15.49583 -15.18907 -14.68542 -14.61533 -14.32367 -14.19174 -14.01490 -13.79883 -13.70302 -13.59997 -13.23618 -13.08218 -12.88460 -12.47179 -12.39148 -11.97213 -11.79532 -11.60101 -11.47085 -11.18556 -10.87512 -10.66992 -10.32812 -10.23910 -9.85075 -9.47757 -5.13115 -0.86777 -0.38050 0.99821 1.01224 1.35892 1.40426 1.56162 1.74577 1.79302 1.98478 2.20932 2.73008 2.77965 3.00693 3.09611 3.19549 3.29477 3.32378 3.35718 3.43830 3.60434 3.66088 3.83430 3.93878 4.01041 4.03677 4.24267 4.26557 4.27853 4.32646 4.42471 4.47179 4.48564 4.59565 4.62517 4.64184 4.67922 4.83229 4.84088 4.90267 4.97556 5.14016 5.31254 5.37183 5.76003 6.08842 6.17164 6.20030 6.80459 6.94986 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.519 6.519 2 C -0.080 4.080 3 Si 0.697 3.303 4 C -0.097 4.097 5 C -0.139 4.139 6 C 0.160 3.840 7 F -0.104 7.104 8 C -0.141 4.141 9 C 0.563 3.437 10 O -0.511 6.511 11 N -0.706 5.706 12 C 0.122 3.878 13 H 0.110 0.890 14 C -0.137 4.137 15 C -0.124 4.124 16 H 0.105 0.895 17 C 0.143 3.857 18 N -0.371 5.371 19 C 0.053 3.947 20 C -0.275 4.275 21 C 0.044 3.956 22 N -0.297 5.297 23 C -0.146 4.146 24 C -0.093 4.093 25 C 0.112 3.888 26 F -0.120 7.120 27 H 0.378 0.622 28 H 0.128 0.872 29 H -0.248 1.248 30 H -0.254 1.254 31 H 0.159 0.841 32 H 0.401 0.599 33 H 0.081 0.919 34 H 0.102 0.898 35 H 0.087 0.913 36 H 0.098 0.902 37 H 0.172 0.828 38 H 0.147 0.853 39 H 0.182 0.818 40 H 0.094 0.906 41 H 0.073 0.927 42 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.535 -1.806 0.874 2.526 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.189 4.189 3 Si 0.596 3.404 4 C -0.098 4.098 5 C -0.158 4.158 6 C 0.140 3.860 7 F -0.082 7.082 8 C -0.146 4.146 9 C 0.350 3.650 10 O -0.386 6.386 11 N -0.358 5.358 12 C 0.017 3.983 13 H 0.128 0.872 14 C -0.176 4.176 15 C -0.143 4.143 16 H 0.123 0.877 17 C 0.021 3.979 18 N -0.153 5.153 19 C -0.094 4.094 20 C -0.304 4.304 21 C -0.142 4.142 22 N -0.119 5.119 23 C -0.184 4.184 24 C -0.113 4.113 25 C 0.092 3.908 26 F -0.098 7.098 27 H 0.226 0.774 28 H 0.145 0.855 29 H -0.173 1.173 30 H -0.179 1.179 31 H 0.176 0.824 32 H 0.237 0.763 33 H 0.099 0.901 34 H 0.121 0.879 35 H 0.105 0.895 36 H 0.116 0.884 37 H 0.189 0.811 38 H 0.165 0.835 39 H 0.199 0.801 40 H 0.113 0.887 41 H 0.092 0.908 42 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.430 -0.419 0.889 1.073 hybrid contribution -0.277 -0.937 0.308 1.025 sum 0.152 -1.356 1.197 1.815 Atomic orbital electron populations 1.86693 1.16674 1.79944 1.49243 1.25118 0.84699 1.11790 0.97311 0.94721 0.91336 0.73388 0.80911 1.20433 0.99313 0.92605 0.97479 1.21074 1.00973 1.01825 0.91898 1.17478 0.95279 0.87912 0.85372 1.91657 1.83561 1.77092 1.55908 1.19842 1.05719 0.92549 0.96441 1.17813 0.78792 0.82222 0.86195 1.90893 1.44122 1.65724 1.37904 1.45521 1.64060 1.06068 1.20200 1.21819 0.94597 0.93114 0.88783 0.87178 1.23359 0.98398 0.94334 1.01476 1.22991 0.97109 0.92836 1.01398 0.87697 1.21781 0.91189 0.95081 0.89811 1.48711 1.09824 1.49518 1.07252 1.22596 0.85895 1.00130 1.00738 1.21558 1.02256 1.14244 0.92385 1.23924 0.90863 0.98900 1.00496 1.77314 1.23588 1.22103 0.88854 1.23525 0.96736 0.95559 1.02604 1.21186 0.97651 1.01095 0.91363 1.17210 0.98831 0.88842 0.85879 1.91588 1.84173 1.78005 1.56044 0.77410 0.85470 1.17269 1.17876 0.82395 0.76253 0.90083 0.87932 0.89495 0.88356 0.81057 0.83546 0.80077 0.88712 0.90782 0.83143 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.11 12.88 -35.23 -0.45 -0.56 16 2 C -0.08 0.11 2.44 36.00 0.09 0.19 16 3 Si 0.70 -1.62 30.24 -169.99 -5.14 -6.76 16 4 C -0.10 0.10 5.27 -104.49 -0.55 -0.45 16 5 C -0.14 0.15 8.62 -39.57 -0.34 -0.20 16 6 C 0.16 0.17 7.28 -38.97 -0.28 -0.11 16 7 F -0.10 -0.37 15.55 2.25 0.04 -0.33 16 8 C -0.14 -0.07 5.88 -104.92 -0.62 -0.68 16 9 C 0.56 1.03 7.77 -12.40 -0.10 0.94 16 10 O -0.51 -2.90 14.94 5.30 0.08 -2.82 16 11 N -0.71 0.79 5.22 -54.00 -0.28 0.51 16 12 C 0.12 -0.19 4.32 -67.11 -0.29 -0.48 16 13 H 0.11 -0.01 7.46 -51.93 -0.39 -0.40 16 14 C -0.14 0.51 7.39 -25.91 -0.19 0.31 16 15 C -0.12 0.32 3.75 -89.81 -0.34 -0.02 16 16 H 0.10 -0.11 7.96 -51.93 -0.41 -0.52 16 17 C 0.14 -0.34 6.35 -4.04 -0.03 -0.37 16 18 N -0.37 -0.24 3.68 -61.36 -0.23 -0.46 16 19 C 0.05 -0.01 11.45 -17.22 -0.20 -0.20 16 20 C -0.27 -0.19 10.80 -40.01 -0.43 -0.62 16 21 C 0.04 0.07 12.03 -17.36 -0.21 -0.14 16 22 N -0.30 -0.84 12.27 30.63 0.38 -0.47 16 23 C -0.15 0.26 7.43 -25.92 -0.19 0.07 16 24 C -0.09 0.13 9.51 -39.11 -0.37 -0.24 16 25 C 0.11 -0.04 7.23 -39.49 -0.29 -0.32 16 26 F -0.12 -0.14 16.73 2.25 0.04 -0.10 16 27 H 0.38 -1.13 8.70 45.56 0.40 -0.74 16 28 H 0.13 -0.22 7.89 -51.93 -0.41 -0.63 16 29 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 30 H -0.25 0.23 6.68 56.52 0.38 0.61 16 31 H 0.16 -0.40 4.83 -52.49 -0.25 -0.65 16 32 H 0.40 -1.34 6.74 -40.82 -0.27 -1.61 16 33 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 34 H 0.10 -0.50 8.10 -51.94 -0.42 -0.92 16 35 H 0.09 -0.23 8.14 -51.93 -0.42 -0.66 16 36 H 0.10 -0.45 7.77 -51.93 -0.40 -0.85 16 37 H 0.17 -0.56 8.06 -52.49 -0.42 -0.99 16 38 H 0.15 -0.15 8.06 -52.49 -0.42 -0.57 16 39 H 0.18 -0.18 8.06 -52.48 -0.42 -0.60 16 40 H 0.09 -0.26 7.90 -51.93 -0.41 -0.67 16 41 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 42 H 0.15 -0.58 6.41 -52.49 -0.34 -0.92 16 LS Contribution 365.15 15.07 5.50 5.50 Total: 0.00 -9.85 365.15 -9.08 -18.92 By element: Atomic # 1 Polarization: -6.44 SS G_CDS: -4.67 Total: -11.11 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -4.33 Total: -2.32 kcal Atomic # 7 Polarization: -0.29 SS G_CDS: -0.13 Total: -0.42 kcal Atomic # 8 Polarization: -3.01 SS G_CDS: -0.37 Total: -3.38 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.07 Total: -0.43 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.14 Total: -6.76 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -9.85 -9.08 -18.92 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.997 kcal (2) G-P(sol) polarization free energy of solvation -9.847 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.150 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.075 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.922 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.926 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds