Wall clock time and date at job start Sun Mar 7 2021 04:34:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35660 * 117.00006 * 2 1 4 4 C 1.40141 * 120.14907 * 180.02562 * 3 2 1 5 5 C 1.47534 * 120.19507 * 359.97438 * 4 3 2 6 6 O 1.21593 * 119.99836 * 359.97438 * 5 4 3 7 7 N 1.34775 * 120.00497 * 179.97438 * 5 4 3 8 8 C 1.46491 * 120.00169 * 179.97438 * 7 5 4 9 9 H 1.08995 * 112.85316 * 336.19603 * 8 7 5 10 10 C 1.53788 * 113.61335 * 107.50617 * 8 7 5 11 11 C 1.53780 * 87.08270 * 89.11539 * 10 8 7 12 12 H 1.09003 * 113.68807 * 270.87270 * 11 10 8 13 13 C 1.52998 * 113.61534 * 139.98046 * 11 10 8 14 14 N 1.46501 * 109.46620 * 87.50094 * 13 11 10 15 15 C 1.34948 * 126.03269 * 124.72336 * 14 13 11 16 16 C 1.35324 * 107.74546 * 179.83862 * 15 14 13 17 17 C 1.39872 * 107.91819 * 0.41304 * 16 15 14 18 18 N 1.30837 * 108.19909 * 359.74523 * 17 16 15 19 19 C 1.53782 * 113.61662 * 205.00076 * 8 7 5 20 20 C 1.39713 * 119.61496 * 179.97438 * 4 3 2 21 21 C 1.37787 * 119.90582 * 359.97438 * 20 4 3 22 22 C 1.50703 * 119.84676 * 179.97438 * 21 20 4 23 23 O 1.42896 * 109.47055 * 300.00329 * 22 21 20 24 24 Si 1.86304 * 109.46911 * 180.02562 * 22 21 20 25 25 C 1.38549 * 120.30352 * 0.25632 * 21 20 4 26 26 C 1.38055 * 120.38767 * 359.48691 * 25 21 20 27 27 H 1.08999 * 109.46850 * 180.02562 * 1 2 3 28 28 H 1.09001 * 109.46698 * 300.00371 * 1 2 3 29 29 H 1.08998 * 109.47118 * 59.99962 * 1 2 3 30 30 H 0.97002 * 119.99671 * 0.02562 * 7 5 4 31 31 H 1.08999 * 113.61258 * 203.66349 * 10 8 7 32 32 H 1.08999 * 113.61285 * 334.56290 * 10 8 7 33 33 H 1.08997 * 109.47227 * 207.49912 * 13 11 10 34 34 H 1.09004 * 109.47204 * 327.50350 * 13 11 10 35 35 H 1.08001 * 126.13266 * 359.97438 * 15 14 13 36 36 H 1.07994 * 126.03972 * 180.16038 * 16 15 14 37 37 H 1.07990 * 125.89874 * 179.75934 * 17 16 15 38 38 H 1.09001 * 113.61534 * 25.42951 * 19 8 7 39 39 H 1.08997 * 113.61987 * 156.25172 * 19 8 7 40 40 H 1.07995 * 120.04489 * 180.02562 * 20 4 3 41 41 H 1.09002 * 109.47152 * 60.00137 * 22 21 20 42 42 H 0.96708 * 114.00101 * 299.99358 * 23 22 21 43 43 H 1.48501 * 109.99652 * 179.97438 * 24 22 21 44 44 H 1.48494 * 110.00064 * 301.31786 * 24 22 21 45 45 H 1.08001 * 119.80477 * 179.71928 * 25 21 20 46 46 H 1.07997 * 119.96200 * 180.28479 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4441 1.2857 -0.0005 5 6 4.2551 0.0532 -0.0005 6 8 3.7095 -1.0334 0.0004 7 7 5.6005 0.1317 -0.0016 8 6 6.4057 -1.0921 -0.0010 9 1 5.8709 -1.9504 0.4055 10 6 7.0974 -1.3750 -1.3451 11 6 8.2764 -0.5355 -0.8255 12 1 8.1901 0.5275 -1.0508 13 6 9.6463 -1.1109 -1.1905 14 7 10.0519 -0.6091 -2.5058 15 6 11.2001 0.0415 -2.7877 16 6 11.1961 0.3310 -4.1096 17 6 10.0005 -0.1511 -4.6522 18 7 9.3139 -0.7148 -3.6917 19 6 7.8115 -0.9043 0.5933 20 6 4.0668 2.5364 -0.0011 21 6 3.3037 3.6837 -0.0016 22 6 3.9767 5.0321 -0.0016 23 8 4.7918 5.1576 1.1654 24 14 2.6824 6.3721 -0.0016 25 6 1.9206 3.6034 0.0037 26 6 1.2924 2.3740 -0.0010 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 6.0357 0.9987 -0.0020 31 1 7.3432 -2.4260 -1.4969 32 1 6.5882 -0.9305 -2.2002 33 1 10.3792 -0.8060 -0.4435 34 1 9.5876 -2.1990 -1.2189 35 1 11.9830 0.2854 -2.0849 36 1 11.9763 0.8471 -4.6494 37 1 9.6967 -0.0720 -5.6855 38 1 7.8791 -0.0797 1.3029 39 1 8.2520 -1.8263 0.9727 40 1 5.1446 2.6038 -0.0019 41 1 4.5991 5.1276 -0.8914 42 1 4.3030 5.0828 1.9965 43 1 3.3334 7.7069 -0.0010 44 1 1.8079 6.2336 -1.1937 45 1 1.3303 4.5078 0.0079 46 1 0.2138 2.3194 -0.0014 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:34:15 Heat of formation + Delta-G solvation = 42.925889 kcal Electronic energy + Delta-G solvation = -29716.283779 eV Core-core repulsion = 25576.202700 eV Total energy + Delta-G solvation = -4140.081079 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.05807 -41.75601 -40.75220 -39.22829 -39.03501 -37.17971 -34.98300 -33.62623 -32.36966 -31.83163 -30.89213 -28.75813 -28.40882 -26.74832 -26.22797 -25.48418 -24.10294 -22.70094 -21.89319 -21.61115 -21.46957 -20.29718 -19.46609 -18.45282 -18.25119 -18.01115 -17.21565 -16.86184 -16.75230 -16.45929 -16.20060 -15.96209 -15.89813 -15.77571 -15.52690 -15.09116 -14.88000 -14.70107 -14.58787 -14.44474 -14.25638 -13.78093 -13.68463 -13.61673 -13.43110 -13.39983 -13.19502 -12.82641 -12.45384 -12.23837 -12.15891 -12.11167 -11.83942 -11.62986 -11.51250 -11.25840 -10.84649 -10.45456 -10.26079 -10.24168 -9.94255 -9.43906 -9.28479 -5.12839 -0.26240 0.18079 1.05583 1.20368 1.54061 1.62816 1.86083 1.90378 2.03521 2.11859 2.21526 2.72020 3.26418 3.34133 3.40883 3.48666 3.58177 3.60975 3.65209 3.77730 3.94658 3.97200 4.00819 4.05381 4.11839 4.18836 4.19719 4.28842 4.32906 4.37511 4.45837 4.56468 4.60832 4.62560 4.68218 4.76024 4.80081 4.87557 4.91983 4.99571 5.05232 5.13425 5.15207 5.18216 5.21944 5.48242 5.63380 5.81442 6.14485 6.28007 6.47915 6.56228 6.87294 7.35575 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.174 4.174 5 C 0.564 3.436 6 O -0.513 6.513 7 N -0.713 5.713 8 C 0.121 3.879 9 H 0.107 0.893 10 C -0.134 4.134 11 C -0.122 4.122 12 H 0.094 0.906 13 C 0.142 3.858 14 N -0.371 5.371 15 C 0.050 3.950 16 C -0.275 4.275 17 C 0.041 3.959 18 N -0.289 5.289 19 C -0.138 4.138 20 C -0.019 4.019 21 C -0.169 4.169 22 C -0.062 4.062 23 O -0.541 6.541 24 Si 0.686 3.314 25 C -0.047 4.047 26 C -0.213 4.213 27 H 0.105 0.895 28 H 0.059 0.941 29 H 0.058 0.942 30 H 0.398 0.602 31 H 0.092 0.908 32 H 0.075 0.925 33 H 0.097 0.903 34 H 0.088 0.912 35 H 0.172 0.828 36 H 0.146 0.854 37 H 0.181 0.819 38 H 0.078 0.922 39 H 0.101 0.899 40 H 0.134 0.866 41 H 0.114 0.886 42 H 0.380 0.620 43 H -0.253 1.253 44 H -0.257 1.257 45 H 0.134 0.866 46 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.131 3.155 3.775 4.922 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.178 4.178 5 C 0.352 3.648 6 O -0.389 6.389 7 N -0.366 5.366 8 C 0.016 3.984 9 H 0.125 0.875 10 C -0.172 4.172 11 C -0.141 4.141 12 H 0.112 0.888 13 C 0.021 3.979 14 N -0.154 5.154 15 C -0.097 4.097 16 C -0.305 4.305 17 C -0.146 4.146 18 N -0.110 5.110 19 C -0.177 4.177 20 C -0.038 4.038 21 C -0.170 4.170 22 C -0.173 4.173 23 O -0.346 6.346 24 Si 0.588 3.412 25 C -0.065 4.065 26 C -0.232 4.232 27 H 0.124 0.876 28 H 0.078 0.922 29 H 0.077 0.923 30 H 0.233 0.767 31 H 0.111 0.889 32 H 0.094 0.906 33 H 0.116 0.884 34 H 0.106 0.894 35 H 0.189 0.811 36 H 0.164 0.836 37 H 0.198 0.802 38 H 0.097 0.903 39 H 0.119 0.881 40 H 0.152 0.848 41 H 0.132 0.868 42 H 0.227 0.773 43 H -0.178 1.178 44 H -0.182 1.182 45 H 0.151 0.849 46 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.445 2.227 3.359 4.282 hybrid contribution 1.231 0.743 -0.681 1.591 sum -0.214 2.970 2.678 4.005 Atomic orbital electron populations 1.23239 0.78168 1.04784 1.01449 1.86386 1.21218 1.25162 1.86154 1.19088 0.90916 0.85086 0.90476 1.19319 0.90903 0.93830 1.13752 1.17931 0.81738 0.88693 0.76432 1.90848 1.71424 1.28570 1.48015 1.45551 1.05758 1.09028 1.76250 1.21801 0.90884 0.88489 0.97234 0.87511 1.23403 0.95555 1.00598 0.97685 1.22900 0.93586 1.00743 0.96852 0.88816 1.21800 0.97126 0.99696 0.79324 1.48754 1.14330 1.44325 1.07967 1.22606 0.91289 0.97825 0.97929 1.21553 1.01762 1.13005 0.94143 1.23941 0.93632 0.97747 0.99240 1.77403 1.19329 1.23706 0.90580 1.23361 0.95320 1.03265 0.95717 1.20948 0.99837 0.89876 0.93166 1.20120 0.93546 0.96014 1.07275 1.24968 1.01861 0.99253 0.91255 1.86499 1.37322 1.95380 1.15423 0.94804 0.80179 0.77629 0.88547 1.20994 0.93634 0.97343 0.94544 1.21234 1.00761 0.91549 1.09671 0.87643 0.92241 0.92341 0.76657 0.88932 0.90601 0.88433 0.89424 0.81074 0.83611 0.80174 0.90297 0.88107 0.84823 0.86830 0.77284 1.17799 1.18217 0.84883 0.84092 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.28 -1.04 8.57 -40.56 -0.35 -1.39 16 3 C 0.19 0.49 6.70 -38.69 -0.26 0.23 16 4 C -0.17 -0.44 5.89 -104.84 -0.62 -1.06 16 5 C 0.56 2.29 7.76 -12.47 -0.10 2.20 16 6 O -0.51 -4.02 14.76 -16.59 -0.24 -4.27 16 7 N -0.71 -0.68 5.21 -54.06 -0.28 -0.97 16 8 C 0.12 0.05 4.32 -67.12 -0.29 -0.24 16 9 H 0.11 0.22 7.46 -51.93 -0.39 -0.17 16 10 C -0.13 -0.09 7.43 -25.92 -0.19 -0.28 16 11 C -0.12 0.15 3.70 -89.81 -0.33 -0.18 16 12 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 13 C 0.14 -0.20 6.35 -4.04 -0.03 -0.22 16 14 N -0.37 -0.56 3.68 -61.36 -0.23 -0.79 16 15 C 0.05 0.03 11.45 -17.22 -0.20 -0.17 16 16 C -0.28 -0.37 10.80 -40.01 -0.43 -0.80 16 17 C 0.04 0.10 12.03 -17.36 -0.21 -0.11 16 18 N -0.29 -1.11 12.42 30.62 0.38 -0.73 16 19 C -0.14 0.33 7.39 -25.92 -0.19 0.14 16 20 C -0.02 0.00 9.09 -39.20 -0.36 -0.36 16 21 C -0.17 0.10 5.39 -104.67 -0.56 -0.46 16 22 C -0.06 0.08 2.81 36.01 0.10 0.18 16 23 O -0.54 0.57 12.76 -35.23 -0.45 0.12 16 24 Si 0.69 -1.31 29.77 -169.99 -5.06 -6.37 16 25 C -0.05 0.05 8.66 -39.53 -0.34 -0.29 16 26 C -0.21 0.03 9.03 -39.48 -0.36 -0.32 16 27 H 0.11 -0.17 8.14 -51.93 -0.42 -0.59 16 28 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 29 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 30 H 0.40 -0.47 6.73 -40.82 -0.27 -0.74 16 31 H 0.09 0.05 7.90 -51.93 -0.41 -0.36 16 32 H 0.08 0.23 8.14 -51.93 -0.42 -0.19 16 33 H 0.10 -0.37 8.07 -51.93 -0.42 -0.79 16 34 H 0.09 -0.14 7.84 -51.93 -0.41 -0.55 16 35 H 0.17 -0.47 8.06 -52.49 -0.42 -0.90 16 36 H 0.15 -0.06 8.06 -52.49 -0.42 -0.49 16 37 H 0.18 0.00 8.06 -52.49 -0.42 -0.42 16 38 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 39 H 0.10 -0.36 8.10 -51.93 -0.42 -0.78 16 40 H 0.13 -0.18 6.40 -52.49 -0.34 -0.52 16 41 H 0.11 -0.09 7.96 -51.93 -0.41 -0.51 16 42 H 0.38 -1.79 8.70 45.56 0.40 -1.39 16 43 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 44 H -0.26 -0.10 7.11 56.52 0.40 0.30 16 45 H 0.13 -0.44 4.85 -52.49 -0.25 -0.69 16 46 H 0.14 -0.34 6.30 -52.49 -0.33 -0.67 16 LS Contribution 382.37 15.07 5.76 5.76 Total: 0.00 -10.97 382.37 -10.05 -21.01 By element: Atomic # 1 Polarization: -5.39 SS G_CDS: -6.21 Total: -11.60 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: -3.37 Total: -0.77 kcal Atomic # 7 Polarization: -2.36 SS G_CDS: -0.13 Total: -2.49 kcal Atomic # 8 Polarization: -4.50 SS G_CDS: -1.04 Total: -5.54 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.06 Total: -6.37 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -10.97 -10.05 -21.01 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.939 kcal (2) G-P(sol) polarization free energy of solvation -10.965 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.973 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.048 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.013 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.926 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds