Wall clock time and date at job start Sun Mar 7 2021 04:34:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86303 * 109.47319 * 2 1 4 4 C 1.50702 * 109.47236 * 239.99556 * 2 1 3 5 5 C 1.38629 * 119.93704 * 74.97711 * 4 2 1 6 6 F 1.35106 * 119.88409 * 0.02562 * 5 4 2 7 7 C 1.38679 * 120.24075 * 179.97438 * 5 4 2 8 8 C 1.37824 * 120.11363 * 359.78776 * 7 5 4 9 9 C 1.39673 * 119.87850 * 0.49040 * 8 7 5 10 10 C 1.47720 * 120.11698 * 179.76244 * 9 8 7 11 11 O 1.21564 * 120.00433 * 179.72280 * 10 9 8 12 12 N 1.34776 * 119.99963 * 359.72716 * 10 9 8 13 13 C 1.46508 * 120.00098 * 179.97438 * 12 10 9 14 14 H 1.09000 * 112.84745 * 336.19733 * 13 12 10 15 15 C 1.53781 * 113.68939 * 107.46253 * 13 12 10 16 16 C 1.53776 * 87.08175 * 89.12540 * 15 13 12 17 17 H 1.09000 * 113.69626 * 270.87394 * 16 15 13 18 18 C 1.53006 * 113.61198 * 139.97780 * 16 15 13 19 19 N 1.46498 * 109.47010 * 87.51033 * 18 16 15 20 20 C 1.34941 * 126.03980 * 125.00325 * 19 18 16 21 21 C 1.35325 * 107.74555 * 180.02562 * 20 19 18 22 22 C 1.39868 * 107.91737 * 0.26206 * 21 20 19 23 23 N 1.30842 * 108.20327 * 359.55203 * 22 21 20 24 24 C 1.53781 * 113.61475 * 204.99758 * 13 12 10 25 25 C 1.37855 * 119.93901 * 255.00462 * 4 2 1 26 26 H 0.96694 * 113.99824 * 59.99906 * 1 2 3 27 27 H 1.09008 * 109.46781 * 119.99851 * 2 1 3 28 28 H 1.48498 * 109.99680 * 298.68042 * 3 2 1 29 29 H 1.48496 * 110.00015 * 59.99996 * 3 2 1 30 30 H 1.07990 * 119.94486 * 180.02562 * 7 5 4 31 31 H 1.08002 * 120.05904 * 180.24985 * 8 7 5 32 32 H 0.97003 * 120.00447 * 359.97438 * 12 10 9 33 33 H 1.09003 * 113.61303 * 334.57918 * 15 13 12 34 34 H 1.09002 * 113.61367 * 203.67582 * 15 13 12 35 35 H 1.08992 * 109.47371 * 327.50222 * 18 16 15 36 36 H 1.09010 * 109.46873 * 207.50310 * 18 16 15 37 37 H 1.07997 * 126.13283 * 0.03046 * 20 19 18 38 38 H 1.08002 * 126.03725 * 179.97438 * 21 20 19 39 39 H 1.08007 * 125.89524 * 179.73435 * 22 21 20 40 40 H 1.08991 * 113.61285 * 156.25004 * 24 13 12 41 41 H 1.09000 * 113.61189 * 25.34517 * 24 13 12 42 42 H 1.07995 * 120.06270 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.8684 -0.0838 -2.4654 6 9 1.3571 1.1630 -2.5622 7 6 2.3294 -0.7316 -3.6016 8 6 2.8570 -2.0014 -3.5076 9 6 2.9174 -2.6397 -2.2667 10 6 3.4770 -4.0027 -2.1608 11 8 3.5332 -4.5543 -1.0790 12 7 3.9253 -4.6347 -3.2635 13 6 4.4808 -5.9863 -3.1583 14 1 4.8586 -6.2122 -2.1612 15 6 3.5619 -7.0782 -3.7310 16 6 4.2543 -6.8415 -5.0834 17 1 3.7789 -6.0706 -5.6899 18 6 4.5280 -8.1279 -5.8653 19 7 3.3585 -8.4611 -6.6822 20 6 3.3545 -8.6682 -8.0156 21 6 2.0835 -8.9494 -8.3855 22 6 1.2825 -8.9070 -7.2397 23 7 2.0468 -8.6204 -6.2171 24 6 5.4675 -6.3361 -4.2848 25 6 2.4521 -1.9826 -1.1259 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5139 0.8901 28 1 1.5880 2.4585 -1.2242 29 1 1.5616 2.4679 1.2085 30 1 2.2784 -0.2388 -4.5612 31 1 3.2194 -2.5035 -4.3925 32 1 3.8802 -4.1947 -4.1268 33 1 2.5062 -6.8066 -3.7275 34 1 3.7467 -8.0679 -3.3131 35 1 4.7279 -8.9414 -5.1679 36 1 5.3935 -7.9829 -6.5120 37 1 4.2119 -8.6184 -8.6704 38 1 1.7464 -9.1638 -9.3889 39 1 0.2176 -9.0836 -7.2046 40 1 6.1732 -7.1227 -4.0183 41 1 5.9502 -5.4654 -4.7285 42 1 2.4999 -2.4702 -0.1635 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:34:19 Heat of formation + Delta-G solvation = 39.980775 kcal Electronic energy + Delta-G solvation = -27385.524867 eV Core-core repulsion = 23250.081914 eV Total energy + Delta-G solvation = -4135.442953 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.132 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -50.49218 -42.11758 -41.59119 -40.40625 -39.13010 -37.76125 -35.20907 -33.74861 -32.81608 -31.89833 -30.94573 -28.65424 -27.04550 -26.85971 -25.46672 -23.98322 -23.60779 -21.95216 -21.73688 -21.60378 -20.46431 -19.32110 -18.94236 -18.25720 -17.93910 -17.86643 -17.20097 -17.00360 -16.57485 -16.23048 -16.11274 -15.77657 -15.60637 -15.44971 -15.12735 -14.99527 -14.88391 -14.69307 -14.49279 -14.08691 -13.85871 -13.74119 -13.65334 -13.52551 -13.39092 -13.05061 -12.89102 -12.37501 -12.34811 -11.75774 -11.58326 -11.36528 -11.27023 -11.13326 -10.84865 -10.32347 -10.24838 -10.17782 -9.88944 -9.49615 -4.95543 -0.58481 -0.08995 0.99679 1.20431 1.54506 1.57117 1.63119 1.90050 1.98215 2.01017 2.49988 2.88212 3.16755 3.18274 3.29340 3.39598 3.44688 3.47036 3.51255 3.66620 3.78351 3.90225 3.93231 4.01772 4.03062 4.21218 4.24348 4.29384 4.49647 4.49910 4.58355 4.64717 4.67973 4.70665 4.75395 4.83793 4.89864 4.90608 4.97292 5.01985 5.04794 5.13095 5.42941 5.50339 5.75938 6.08541 6.27881 6.31786 6.81505 7.07154 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.523 6.523 2 C -0.074 4.074 3 Si 0.676 3.324 4 C -0.151 4.151 5 C 0.119 3.881 6 F -0.123 7.123 7 C -0.152 4.152 8 C -0.055 4.055 9 C -0.143 4.143 10 C 0.565 3.435 11 O -0.526 6.526 12 N -0.709 5.709 13 C 0.118 3.882 14 H 0.109 0.891 15 C -0.134 4.134 16 C -0.122 4.122 17 H 0.094 0.906 18 C 0.142 3.858 19 N -0.372 5.372 20 C 0.049 3.951 21 C -0.274 4.274 22 C 0.041 3.959 23 N -0.289 5.289 24 C -0.137 4.137 25 C -0.009 4.009 26 H 0.375 0.625 27 H 0.125 0.875 28 H -0.231 1.231 29 H -0.259 1.259 30 H 0.147 0.853 31 H 0.137 0.863 32 H 0.400 0.600 33 H 0.076 0.924 34 H 0.094 0.906 35 H 0.088 0.912 36 H 0.098 0.902 37 H 0.172 0.828 38 H 0.146 0.854 39 H 0.182 0.818 40 H 0.102 0.898 41 H 0.079 0.921 42 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.471 0.110 -5.894 8.042 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.183 4.183 3 Si 0.575 3.425 4 C -0.152 4.152 5 C 0.100 3.900 6 F -0.101 7.101 7 C -0.171 4.171 8 C -0.074 4.074 9 C -0.147 4.147 10 C 0.352 3.648 11 O -0.403 6.403 12 N -0.360 5.360 13 C 0.013 3.987 14 H 0.127 0.873 15 C -0.172 4.172 16 C -0.141 4.141 17 H 0.112 0.888 18 C 0.020 3.980 19 N -0.155 5.155 20 C -0.096 4.096 21 C -0.304 4.304 22 C -0.145 4.145 23 N -0.111 5.111 24 C -0.176 4.176 25 C -0.028 4.028 26 H 0.223 0.777 27 H 0.143 0.857 28 H -0.154 1.154 29 H -0.184 1.184 30 H 0.164 0.836 31 H 0.155 0.845 32 H 0.235 0.765 33 H 0.095 0.905 34 H 0.112 0.888 35 H 0.106 0.894 36 H 0.116 0.884 37 H 0.189 0.811 38 H 0.164 0.836 39 H 0.199 0.801 40 H 0.120 0.880 41 H 0.098 0.902 42 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 5.552 0.507 -3.216 6.436 hybrid contribution -1.255 -0.024 -2.180 2.515 sum 4.296 0.483 -5.396 6.914 Atomic orbital electron populations 1.86660 1.17085 1.79905 1.49267 1.25002 0.84302 1.11476 0.97538 0.95461 0.91423 0.74645 0.81001 1.20272 1.04072 0.96412 0.94483 1.17906 0.97231 0.80489 0.94388 1.91580 1.84455 1.37647 1.96418 1.21094 1.01757 0.95989 0.98252 1.21167 0.95654 0.93801 0.96759 1.19979 1.04980 0.95217 0.94488 1.18091 0.77469 0.85109 0.84101 1.90823 1.55151 1.67167 1.27158 1.45545 1.63533 1.16698 1.10239 1.21869 0.94708 0.81576 1.00535 0.87324 1.23406 1.00321 0.99241 0.94263 1.22909 0.98197 0.96797 0.96207 0.88791 1.21792 0.84052 0.97589 0.94533 1.48746 1.07214 1.53902 1.05607 1.22604 0.99928 1.01469 0.85649 1.21562 0.92633 1.15673 1.00530 1.23955 1.00323 0.99651 0.90568 1.77406 0.87587 1.22922 1.23137 1.23361 0.96238 1.02056 0.95934 1.21046 0.91297 0.91279 0.99133 0.77700 0.85736 1.15450 1.18436 0.83554 0.84542 0.76470 0.90502 0.88782 0.89414 0.88410 0.81068 0.83582 0.80136 0.87980 0.90249 0.83131 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -1.08 12.88 -35.23 -0.45 -1.53 16 2 C -0.07 -0.02 2.80 36.01 0.10 0.08 16 3 Si 0.68 -0.12 30.81 -169.99 -5.24 -5.36 16 4 C -0.15 -0.02 4.78 -104.62 -0.50 -0.52 16 5 C 0.12 -0.02 6.63 -39.27 -0.26 -0.28 16 6 F -0.12 -0.10 12.57 2.25 0.03 -0.08 16 7 C -0.15 0.27 10.01 -39.57 -0.40 -0.13 16 8 C -0.06 0.12 9.54 -39.20 -0.37 -0.25 16 9 C -0.14 0.00 5.87 -104.97 -0.62 -0.62 16 10 C 0.56 0.82 7.77 -12.39 -0.10 0.72 16 11 O -0.53 -2.77 15.94 5.31 0.08 -2.68 16 12 N -0.71 0.98 5.22 -54.00 -0.28 0.69 16 13 C 0.12 -0.17 4.32 -67.11 -0.29 -0.46 16 14 H 0.11 0.02 7.46 -51.93 -0.39 -0.36 16 15 C -0.13 0.11 7.43 -25.92 -0.19 -0.08 16 16 C -0.12 0.34 3.71 -89.80 -0.33 0.00 16 17 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 18 C 0.14 -0.36 6.35 -4.04 -0.03 -0.39 16 19 N -0.37 -0.19 3.68 -61.36 -0.23 -0.41 16 20 C 0.05 -0.02 11.45 -17.22 -0.20 -0.22 16 21 C -0.27 -0.14 10.80 -40.01 -0.43 -0.58 16 22 C 0.04 0.07 12.03 -17.36 -0.21 -0.14 16 23 N -0.29 -0.84 12.42 30.63 0.38 -0.46 16 24 C -0.14 0.55 7.39 -25.92 -0.19 0.36 16 25 C -0.01 0.00 9.21 -39.20 -0.36 -0.37 16 26 H 0.38 -0.17 8.41 45.56 0.38 0.22 16 27 H 0.12 -0.09 7.77 -51.92 -0.40 -0.50 16 28 H -0.23 -0.38 5.27 56.52 0.30 -0.08 16 29 H -0.26 -0.80 7.11 56.52 0.40 -0.40 16 30 H 0.15 -0.53 8.06 -52.49 -0.42 -0.96 16 31 H 0.14 -0.71 6.40 -52.49 -0.34 -1.04 16 32 H 0.40 -1.56 6.73 -40.82 -0.27 -1.83 16 33 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 34 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 35 H 0.09 -0.23 7.84 -51.93 -0.41 -0.64 16 36 H 0.10 -0.48 8.07 -51.92 -0.42 -0.90 16 37 H 0.17 -0.63 8.06 -52.49 -0.42 -1.05 16 38 H 0.15 -0.17 8.06 -52.49 -0.42 -0.59 16 39 H 0.18 -0.14 8.06 -52.48 -0.42 -0.56 16 40 H 0.10 -0.51 8.10 -51.93 -0.42 -0.93 16 41 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 42 H 0.15 0.11 7.58 -52.49 -0.40 -0.29 16 LS Contribution 358.89 15.07 5.41 5.41 Total: 0.00 -9.39 358.89 -10.01 -19.40 By element: Atomic # 1 Polarization: -6.79 SS G_CDS: -5.33 Total: -12.12 kcal Atomic # 6 Polarization: 1.52 SS G_CDS: -4.37 Total: -2.85 kcal Atomic # 7 Polarization: -0.05 SS G_CDS: -0.13 Total: -0.18 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -0.37 Total: -4.22 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.03 Total: -0.08 kcal Atomic # 14 Polarization: -0.12 SS G_CDS: -5.24 Total: -5.36 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -9.39 -10.01 -19.40 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 59.378 kcal (2) G-P(sol) polarization free energy of solvation -9.392 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.986 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.005 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.397 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.981 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds