Wall clock time and date at job start Sun Mar 7 2021 04:34:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.39282 * 121.03205 * 2 1 4 4 C 1.46503 * 134.19655 * 0.02562 * 3 2 1 5 5 C 1.50705 * 126.59874 * 359.97438 * 4 3 2 6 6 O 1.42897 * 109.47031 * 285.00463 * 5 4 3 7 7 Si 1.86301 * 109.46772 * 165.00149 * 5 4 3 8 8 C 1.34183 * 106.79972 * 179.97438 * 4 3 2 9 9 N 1.36946 * 109.94991 * 359.97438 * 8 4 3 10 10 C 1.37144 * 110.11916 * 0.02562 * 9 8 4 11 11 N 1.32824 * 132.97037 * 179.97438 * 10 9 8 12 12 C 1.31306 * 121.89427 * 179.97438 * 11 10 9 13 13 C 1.39747 * 121.03157 * 180.02562 * 2 1 3 14 14 C 1.47664 * 120.45838 * 359.97438 * 13 2 1 15 15 O 1.21578 * 119.99328 * 6.05009 * 14 13 2 16 16 N 1.34769 * 120.00736 * 186.03913 * 14 13 2 17 17 C 1.46496 * 120.00669 * 180.02562 * 16 14 13 18 18 H 1.09007 * 112.84845 * 336.20170 * 17 16 14 19 19 C 1.53781 * 113.61659 * 107.50579 * 17 16 14 20 20 C 1.53774 * 87.07903 * 89.11966 * 19 17 16 21 21 H 1.09000 * 113.69213 * 270.87038 * 20 19 17 22 22 C 1.53008 * 113.61309 * 139.98405 * 20 19 17 23 23 N 1.46497 * 109.47212 * 87.50039 * 22 20 19 24 24 C 1.34942 * 126.03922 * 124.99943 * 23 22 20 25 25 C 1.35316 * 107.74797 * 179.97438 * 24 23 22 26 26 C 1.39868 * 107.92039 * 0.02562 * 25 24 23 27 27 N 1.30840 * 108.20344 * 359.73560 * 26 25 24 28 28 C 1.53776 * 87.08626 * 25.43525 * 20 19 17 29 29 H 1.08996 * 109.47557 * 96.42241 * 1 2 3 30 30 H 1.09009 * 109.47052 * 216.42184 * 1 2 3 31 31 H 1.08998 * 109.47218 * 336.41419 * 1 2 3 32 32 H 1.09003 * 109.46591 * 45.00564 * 5 4 3 33 33 H 0.96705 * 113.99444 * 180.02562 * 6 5 4 34 34 H 1.48494 * 109.99916 * 60.00282 * 7 5 4 35 35 H 1.48500 * 109.99893 * 181.31998 * 7 5 4 36 36 H 1.08000 * 125.01957 * 179.73123 * 8 4 3 37 37 H 0.97007 * 124.93633 * 179.97438 * 9 8 4 38 38 H 1.07996 * 119.31468 * 180.02562 * 12 11 10 39 39 H 0.97004 * 119.99942 * 0.02562 * 16 14 13 40 40 H 1.09003 * 113.61430 * 203.67304 * 19 17 16 41 41 H 1.08998 * 113.61167 * 334.56793 * 19 17 16 42 42 H 1.09001 * 109.47035 * 207.49691 * 22 20 19 43 43 H 1.09003 * 109.46838 * 327.50095 * 22 20 19 44 44 H 1.08003 * 126.12751 * 359.97438 * 24 23 22 45 45 H 1.08004 * 126.04279 * 180.02562 * 25 24 23 46 46 H 1.08002 * 125.90189 * 180.02562 * 26 25 24 47 47 H 1.09000 * 113.61810 * 220.02380 * 28 20 19 48 48 H 1.08999 * 113.61661 * 89.11343 * 28 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8514 2.6101 0.0005 5 6 0.4524 3.1704 0.0006 6 8 -0.1193 3.0242 -1.3008 7 14 0.5069 4.9761 0.4558 8 6 2.9947 3.3126 0.0008 9 7 4.0667 2.4605 0.0011 10 6 3.6348 1.1589 0.0005 11 7 4.2720 -0.0065 0.0000 12 6 3.6267 -1.1501 -0.0001 13 6 2.2274 -1.1975 -0.0005 14 6 1.5225 -2.4950 -0.0005 15 8 0.3123 -2.5293 -0.1111 16 7 2.2207 -3.6413 0.1217 17 6 1.5215 -4.9286 0.1211 18 1 0.4788 -4.8441 0.4276 19 6 1.7221 -5.7380 -1.1709 20 6 2.9625 -6.3518 -0.5006 21 1 3.8776 -5.7841 -0.6696 22 6 3.1316 -7.8472 -0.7767 23 7 3.8854 -8.0323 -2.0191 24 6 5.0176 -8.7527 -2.1609 25 6 5.3967 -8.6742 -3.4575 26 6 4.4646 -7.8781 -4.1310 27 7 3.5552 -7.4972 -3.2709 28 6 2.2883 -6.0465 0.8473 29 1 -0.3634 -0.1149 -1.0211 30 1 -0.3634 -0.8270 0.6102 31 1 -0.3633 0.9418 0.4112 32 1 -0.1550 2.6307 0.7272 33 1 -1.0215 3.3647 -1.3745 34 1 1.3322 5.7230 -0.5271 35 1 -0.8694 5.5329 0.4906 36 1 3.0596 4.3907 -0.0030 37 1 4.9964 2.7374 0.0010 38 1 4.1869 -2.0734 0.0000 39 1 3.1863 -3.6139 0.2101 40 1 0.9273 -6.4591 -1.3623 41 1 1.9548 -5.1226 -2.0399 42 1 3.6723 -8.3102 0.0488 43 1 2.1503 -8.3118 -0.8743 44 1 5.5295 -9.2948 -1.3795 45 1 6.2656 -9.1434 -3.8951 46 1 4.4884 -7.6257 -5.1809 47 1 2.9781 -5.6801 1.6076 48 1 1.6484 -6.8520 1.2077 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:34:39 Heat of formation + Delta-G solvation = 126.402173 kcal Electronic energy + Delta-G solvation = -32451.464349 eV Core-core repulsion = 28090.843544 eV Total energy + Delta-G solvation = -4360.620805 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.80041 -42.03338 -41.23305 -39.74355 -38.49923 -37.80701 -35.33133 -34.75819 -33.52523 -32.00363 -31.06393 -30.76801 -28.89866 -28.39616 -26.76854 -26.46959 -24.94184 -24.25652 -23.61515 -21.98638 -21.87776 -21.54888 -20.43551 -20.29527 -19.17992 -18.69889 -18.49852 -18.13560 -17.56044 -17.12010 -16.65539 -16.48324 -16.35391 -15.82401 -15.73132 -15.48806 -15.31451 -15.11197 -14.92200 -14.77467 -14.65383 -14.42566 -14.05660 -13.99729 -13.72257 -13.63873 -13.56611 -13.46494 -13.41429 -13.19335 -12.90748 -12.82767 -12.63546 -12.24394 -11.99176 -11.64777 -11.51758 -11.27919 -11.09498 -10.99769 -10.36921 -10.25994 -10.20610 -10.02087 -9.54343 -9.43877 -9.08649 -5.01730 -0.19202 -0.01037 1.05515 1.22351 1.39034 1.52121 1.62570 1.65796 1.89882 1.94895 2.03724 2.07667 2.87237 3.24445 3.28716 3.36644 3.40303 3.58721 3.59747 3.70178 3.74127 3.77319 3.83080 3.96744 3.99889 4.10645 4.10991 4.14390 4.28122 4.32064 4.36478 4.39637 4.58738 4.66386 4.68277 4.75367 4.77306 4.82828 4.91266 4.96672 4.98720 5.08727 5.10632 5.13493 5.18383 5.25157 5.37767 5.51906 5.62657 5.80969 5.81517 6.14338 6.14417 6.48557 6.48971 6.87245 6.89228 7.26897 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C 0.086 3.914 3 C -0.148 4.148 4 C -0.133 4.133 5 C -0.044 4.044 6 O -0.533 6.533 7 Si 0.681 3.319 8 C 0.072 3.928 9 N -0.569 5.569 10 C 0.309 3.691 11 N -0.503 5.503 12 C 0.180 3.820 13 C -0.234 4.234 14 C 0.576 3.424 15 O -0.528 6.528 16 N -0.711 5.711 17 C 0.121 3.879 18 H 0.108 0.892 19 C -0.134 4.134 20 C -0.122 4.122 21 H 0.094 0.906 22 C 0.142 3.858 23 N -0.371 5.371 24 C 0.049 3.951 25 C -0.275 4.275 26 C 0.041 3.959 27 N -0.288 5.288 28 C -0.138 4.138 29 H 0.086 0.914 30 H 0.097 0.903 31 H 0.067 0.933 32 H 0.078 0.922 33 H 0.378 0.622 34 H -0.253 1.253 35 H -0.258 1.258 36 H 0.184 0.816 37 H 0.426 0.574 38 H 0.161 0.839 39 H 0.398 0.602 40 H 0.092 0.908 41 H 0.076 0.924 42 H 0.097 0.903 43 H 0.087 0.913 44 H 0.172 0.828 45 H 0.146 0.854 46 H 0.181 0.819 47 H 0.079 0.921 48 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.825 0.285 5.320 6.030 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.077 3.923 3 C -0.155 4.155 4 C -0.140 4.140 5 C -0.154 4.154 6 O -0.340 6.340 7 Si 0.581 3.419 8 C -0.055 4.055 9 N -0.175 5.175 10 C 0.076 3.924 11 N -0.216 5.216 12 C 0.012 3.988 13 C -0.241 4.241 14 C 0.364 3.636 15 O -0.405 6.405 16 N -0.363 5.363 17 C 0.016 3.984 18 H 0.126 0.874 19 C -0.173 4.173 20 C -0.141 4.141 21 H 0.113 0.887 22 C 0.021 3.979 23 N -0.154 5.154 24 C -0.097 4.097 25 C -0.304 4.304 26 C -0.145 4.145 27 N -0.110 5.110 28 C -0.177 4.177 29 H 0.104 0.896 30 H 0.116 0.884 31 H 0.085 0.915 32 H 0.096 0.904 33 H 0.226 0.774 34 H -0.177 1.177 35 H -0.182 1.182 36 H 0.201 0.799 37 H 0.265 0.735 38 H 0.178 0.822 39 H 0.234 0.766 40 H 0.111 0.889 41 H 0.095 0.905 42 H 0.116 0.884 43 H 0.105 0.895 44 H 0.189 0.811 45 H 0.164 0.836 46 H 0.198 0.802 47 H 0.097 0.903 48 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 2.213 1.668 5.189 5.882 hybrid contribution 0.307 -0.777 -1.013 1.313 sum 2.520 0.891 4.176 4.958 Atomic orbital electron populations 1.21161 0.88914 1.03496 1.04257 1.19878 0.97078 0.89159 0.86172 1.19462 0.92863 0.93512 1.09670 1.19428 0.93141 0.90556 1.10911 1.24166 0.92088 1.11175 0.87978 1.86650 1.33657 1.83879 1.29795 0.95264 0.83407 0.74075 0.89139 1.21722 0.84997 0.95938 1.02812 1.41483 1.09581 1.02669 1.63728 1.18467 0.89270 0.85892 0.98817 1.66429 1.40539 0.95988 1.18648 1.22472 0.90071 0.94404 0.91889 1.20391 0.94745 0.93647 1.15366 1.17849 0.86805 0.83156 0.75776 1.90755 1.13554 1.86989 1.49199 1.45540 1.10436 1.05105 1.75202 1.21823 0.97828 0.81802 0.96991 0.87415 1.23404 0.96988 0.99177 0.97689 1.22908 0.99422 0.94602 0.97196 0.88730 1.21795 0.97034 0.97266 0.81855 1.48750 1.19907 1.38814 1.07936 1.22599 0.89973 0.97976 0.99113 1.21552 1.05242 1.10036 0.93599 1.23946 0.93055 0.97626 0.99911 1.77410 1.23436 1.21172 0.88970 1.23363 0.99691 0.98574 0.96038 0.89586 0.88443 0.91459 0.90431 0.77389 1.17712 1.18233 0.79906 0.73519 0.82244 0.76617 0.88920 0.90513 0.88447 0.89464 0.81086 0.83616 0.80172 0.90261 0.88109 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.36 8.68 36.00 0.31 -0.05 16 2 C 0.09 0.31 5.98 -103.67 -0.62 -0.31 16 3 C -0.15 -0.51 6.16 -105.13 -0.65 -1.16 16 4 C -0.13 -0.20 5.61 -102.72 -0.58 -0.77 16 5 C -0.04 0.01 2.05 36.01 0.07 0.08 16 6 O -0.53 -0.66 12.86 -35.23 -0.45 -1.11 16 7 Si 0.68 -1.28 30.80 -169.99 -5.24 -6.51 16 8 C 0.07 -0.04 10.43 -16.70 -0.17 -0.21 16 9 N -0.57 -0.04 6.04 -12.12 -0.07 -0.11 16 10 C 0.31 0.95 8.42 -155.72 -1.31 -0.36 16 11 N -0.50 -1.63 10.37 -11.96 -0.12 -1.76 16 12 C 0.18 0.30 10.67 -17.11 -0.18 0.12 16 13 C -0.23 -0.66 5.89 -104.82 -0.62 -1.27 16 14 C 0.58 1.65 7.72 -12.41 -0.10 1.55 16 15 O -0.53 -2.99 13.10 5.30 0.07 -2.92 16 16 N -0.71 0.10 5.21 -54.02 -0.28 -0.18 16 17 C 0.12 -0.07 4.32 -67.12 -0.29 -0.36 16 18 H 0.11 0.09 7.46 -51.92 -0.39 -0.29 16 19 C -0.13 0.01 7.43 -25.92 -0.19 -0.18 16 20 C -0.12 0.24 3.71 -89.81 -0.33 -0.09 16 21 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 22 C 0.14 -0.27 6.35 -4.04 -0.03 -0.30 16 23 N -0.37 -0.42 3.68 -61.36 -0.23 -0.64 16 24 C 0.05 0.01 11.45 -17.23 -0.20 -0.19 16 25 C -0.27 -0.30 10.80 -40.01 -0.43 -0.73 16 26 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 27 N -0.29 -1.02 12.42 30.63 0.38 -0.64 16 28 C -0.14 0.44 7.39 -25.92 -0.19 0.25 16 29 H 0.09 0.34 8.14 -51.93 -0.42 -0.09 16 30 H 0.10 0.37 5.97 -51.92 -0.31 0.06 16 31 H 0.07 0.10 5.05 -51.93 -0.26 -0.16 16 32 H 0.08 -0.09 6.05 -51.93 -0.31 -0.41 16 33 H 0.38 -1.02 8.74 45.56 0.40 -0.62 16 34 H -0.25 -0.12 7.04 56.52 0.40 0.28 16 35 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 36 H 0.18 -0.67 6.31 -52.49 -0.33 -1.00 16 37 H 0.43 -1.14 8.96 -40.82 -0.37 -1.50 16 38 H 0.16 -0.29 6.43 -52.49 -0.34 -0.63 16 39 H 0.40 -0.95 6.78 -40.82 -0.28 -1.23 16 40 H 0.09 -0.01 7.90 -51.93 -0.41 -0.42 16 41 H 0.08 0.18 8.14 -51.93 -0.42 -0.25 16 42 H 0.10 -0.42 8.07 -51.93 -0.42 -0.84 16 43 H 0.09 -0.18 7.84 -51.93 -0.41 -0.59 16 44 H 0.17 -0.53 8.06 -52.48 -0.42 -0.95 16 45 H 0.15 -0.09 8.06 -52.48 -0.42 -0.52 16 46 H 0.18 -0.03 8.06 -52.49 -0.42 -0.45 16 47 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 48 H 0.10 -0.43 8.10 -51.93 -0.42 -0.85 16 LS Contribution 394.11 15.07 5.94 5.94 Total: 0.00 -11.74 394.11 -11.72 -23.45 By element: Atomic # 1 Polarization: -5.40 SS G_CDS: -6.00 Total: -11.41 kcal Atomic # 6 Polarization: 1.60 SS G_CDS: -5.71 Total: -4.11 kcal Atomic # 7 Polarization: -3.01 SS G_CDS: -0.32 Total: -3.33 kcal Atomic # 8 Polarization: -3.65 SS G_CDS: -0.38 Total: -4.04 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.24 Total: -6.51 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -11.74 -11.72 -23.45 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 149.855 kcal (2) G-P(sol) polarization free energy of solvation -11.736 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 138.120 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.718 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.453 kcal (6) G-S(sol) free energy of system = (1) + (5) 126.402 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds