Wall clock time and date at job start Sun Mar 7 2021 04:35:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86293 * 109.47499 * 2 1 4 4 C 1.50704 * 109.46719 * 119.99673 * 2 1 3 5 5 C 1.38365 * 120.35004 * 65.29196 * 4 2 1 6 6 C 1.40021 * 118.28720 * 180.25679 * 5 4 2 7 7 C 1.47844 * 120.55782 * 179.75538 * 6 5 4 8 8 O 1.21551 * 119.99656 * 359.97438 * 7 6 5 9 9 N 1.34768 * 120.00060 * 179.97438 * 7 6 5 10 10 C 1.46503 * 120.00003 * 180.02562 * 9 7 6 11 11 H 1.08995 * 112.84551 * 334.65604 * 10 9 7 12 12 C 1.53783 * 113.61671 * 105.86183 * 10 9 7 13 13 C 1.54053 * 86.98548 * 89.15933 * 12 10 9 14 14 H 1.09000 * 113.68951 * 270.87025 * 13 12 10 15 15 C 1.53003 * 113.61631 * 139.97882 * 13 12 10 16 16 N 1.46503 * 109.47022 * 87.50255 * 15 13 12 17 17 C 1.34952 * 126.03463 * 124.71671 * 16 15 13 18 18 C 1.35314 * 107.74187 * 179.84331 * 17 16 15 19 19 C 1.39874 * 107.92443 * 0.41745 * 18 17 16 20 20 N 1.30838 * 108.19487 * 359.74213 * 19 18 17 21 21 C 1.53781 * 87.07837 * 25.42938 * 13 12 10 22 22 C 1.39518 * 118.88264 * 359.73533 * 6 5 4 23 23 N 1.31696 * 120.56562 * 359.97438 * 22 6 5 24 24 C 1.31924 * 121.88228 * 0.02562 * 23 22 6 25 25 H 0.96705 * 113.99432 * 59.99828 * 1 2 3 26 26 H 1.09003 * 109.47218 * 239.99317 * 2 1 3 27 27 H 1.48509 * 109.99832 * 298.67680 * 3 2 1 28 28 H 1.48496 * 110.00216 * 59.99345 * 3 2 1 29 29 H 1.08002 * 120.84920 * 359.97438 * 5 4 2 30 30 H 0.96999 * 120.00236 * 359.97438 * 9 7 6 31 31 H 1.08993 * 113.61283 * 203.66493 * 12 10 9 32 32 H 1.09004 * 113.61164 * 334.56145 * 12 10 9 33 33 H 1.08994 * 109.46679 * 207.50336 * 15 13 12 34 34 H 1.09000 * 109.47123 * 327.50740 * 15 13 12 35 35 H 1.07996 * 126.12244 * 359.97438 * 17 16 15 36 36 H 1.08004 * 126.03833 * 180.16418 * 18 17 16 37 37 H 1.07998 * 125.89921 * 179.71842 * 19 18 17 38 38 H 1.08996 * 113.61201 * 220.02170 * 21 13 12 39 39 H 1.09000 * 113.68717 * 89.13102 * 21 13 12 40 40 H 1.08001 * 119.71609 * 179.97438 * 22 6 5 41 41 H 1.08002 * 119.45755 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 1.6936 -2.0625 1.4032 6 6 2.1751 -2.6778 2.5652 7 6 1.9451 -4.1187 2.8033 8 8 1.3331 -4.7794 1.9870 9 7 2.4139 -4.6995 3.9254 10 6 2.1865 -6.1274 4.1611 11 1 1.3063 -6.5070 3.6423 12 6 3.4416 -6.9928 3.9592 13 6 3.7541 -6.7425 5.4468 14 1 4.3521 -5.8487 5.6244 15 6 4.2961 -7.9742 6.1749 16 7 5.7523 -8.0294 6.0238 17 6 6.6525 -8.0969 7.0269 18 6 7.8861 -8.1342 6.4720 19 6 7.7350 -8.0782 5.0826 20 7 6.4563 -8.0153 4.8129 21 6 2.2450 -6.5236 5.6458 22 6 2.8759 -1.9083 3.4943 23 7 3.0817 -0.6249 3.2819 24 6 2.6399 -0.0187 2.1966 25 1 -0.3932 0.4418 -0.7651 26 1 1.7923 -0.5139 -0.8899 27 1 1.5880 2.4584 -1.2244 28 1 1.5615 2.4679 1.2084 29 1 1.1469 -2.6277 0.6629 30 1 2.9026 -4.1723 4.5766 31 1 3.2210 -8.0349 3.7288 32 1 4.1704 -6.5528 3.2784 33 1 4.0427 -7.9113 7.2332 34 1 3.8522 -8.8734 5.7477 35 1 6.4284 -8.1195 8.0831 36 1 8.8222 -8.1924 7.0075 37 1 8.5356 -8.0852 4.3577 38 1 2.0085 -5.7052 6.3258 39 1 1.6967 -7.4371 5.8759 40 1 3.2529 -2.3690 4.3954 41 1 2.8313 1.0357 2.0621 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:35:25 Heat of formation + Delta-G solvation = 89.061222 kcal Electronic energy + Delta-G solvation = -25043.331656 eV Core-core repulsion = 21314.045055 eV Total energy + Delta-G solvation = -3729.286601 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.137 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.12449 -41.86186 -40.87453 -39.29040 -38.04361 -35.21215 -33.89581 -33.79775 -32.68923 -30.93075 -28.67894 -27.33593 -26.84301 -25.99867 -24.11517 -23.72599 -21.93259 -21.79953 -21.58930 -20.44275 -19.05462 -18.72862 -18.26007 -18.04301 -17.77522 -16.91433 -16.54370 -16.23823 -16.07763 -15.83429 -15.49351 -15.27373 -15.03669 -14.79773 -14.63079 -14.44781 -14.23458 -14.13876 -13.90258 -13.76563 -13.61744 -13.49192 -12.93454 -12.71861 -12.33323 -12.10205 -11.75394 -11.55726 -11.34882 -11.31772 -11.02427 -10.75300 -10.50956 -10.33312 -10.29173 -10.11918 -9.47020 -5.10028 -0.55457 0.00639 1.02342 1.09553 1.46394 1.58971 1.71791 1.81300 1.90906 2.00858 2.59993 2.99522 3.16326 3.20278 3.31867 3.51593 3.52878 3.59666 3.66203 3.69851 3.77123 3.92368 3.95613 4.05629 4.06158 4.18005 4.24445 4.30956 4.39777 4.51904 4.60300 4.66924 4.73139 4.83572 4.87007 4.92565 4.94080 5.01454 5.06368 5.15690 5.30676 5.46626 5.78548 6.11081 6.28666 6.31144 6.64408 6.84102 7.06316 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.073 4.073 3 Si 0.684 3.316 4 C -0.131 4.131 5 C 0.013 3.987 6 C -0.189 4.189 7 C 0.569 3.431 8 O -0.526 6.526 9 N -0.708 5.708 10 C 0.118 3.882 11 H 0.108 0.892 12 C -0.133 4.133 13 C -0.122 4.122 14 H 0.095 0.905 15 C 0.142 3.858 16 N -0.372 5.372 17 C 0.050 3.950 18 C -0.274 4.274 19 C 0.041 3.959 20 N -0.289 5.289 21 C -0.137 4.137 22 C 0.139 3.861 23 N -0.477 5.477 24 C 0.131 3.869 25 H 0.384 0.616 26 H 0.083 0.917 27 H -0.255 1.255 28 H -0.250 1.250 29 H 0.151 0.849 30 H 0.400 0.600 31 H 0.094 0.906 32 H 0.077 0.923 33 H 0.098 0.902 34 H 0.088 0.912 35 H 0.172 0.828 36 H 0.146 0.854 37 H 0.182 0.818 38 H 0.079 0.921 39 H 0.102 0.898 40 H 0.160 0.840 41 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.240 0.765 2.738 3.619 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.183 4.183 3 Si 0.584 3.416 4 C -0.133 4.133 5 C -0.013 4.013 6 C -0.194 4.194 7 C 0.356 3.644 8 O -0.402 6.402 9 N -0.359 5.359 10 C 0.013 3.987 11 H 0.126 0.874 12 C -0.171 4.171 13 C -0.141 4.141 14 H 0.113 0.887 15 C 0.021 3.979 16 N -0.155 5.155 17 C -0.096 4.096 18 C -0.304 4.304 19 C -0.145 4.145 20 N -0.111 5.111 21 C -0.176 4.176 22 C -0.019 4.019 23 N -0.184 5.184 24 C -0.025 4.025 25 H 0.233 0.767 26 H 0.101 0.899 27 H -0.179 1.179 28 H -0.174 1.174 29 H 0.169 0.831 30 H 0.236 0.764 31 H 0.112 0.888 32 H 0.096 0.904 33 H 0.116 0.884 34 H 0.106 0.894 35 H 0.189 0.811 36 H 0.164 0.836 37 H 0.199 0.801 38 H 0.098 0.902 39 H 0.120 0.880 40 H 0.177 0.823 41 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 1.087 1.357 2.433 2.991 hybrid contribution -0.576 -0.486 -0.032 0.754 sum 0.511 0.871 2.402 2.605 Atomic orbital electron populations 1.86589 1.17315 1.80283 1.50035 1.24707 0.84901 1.11264 0.97463 0.95084 0.91390 0.74099 0.81040 1.20294 1.01045 0.94495 0.97514 1.21610 0.91404 0.93329 0.94995 1.20983 1.05031 0.94976 0.98380 1.17976 0.78623 0.86319 0.81494 1.90817 1.40313 1.64465 1.44613 1.45536 1.57851 1.10078 1.22457 1.21876 0.99749 0.80268 0.96781 0.87432 1.23448 0.97299 1.00741 0.95662 1.22963 0.96012 0.97979 0.97166 0.88681 1.21786 0.74867 0.99342 1.01948 1.48746 1.06313 1.56481 1.03933 1.22604 0.89846 1.02046 0.95137 1.21559 0.97962 1.16585 0.94285 1.23951 0.94305 0.99903 0.96325 1.77396 1.05450 1.23816 1.04400 1.23353 0.95163 1.03004 0.96072 1.23005 0.92138 0.89550 0.97241 1.67745 1.19656 1.10456 1.20558 1.22888 0.91669 1.00012 0.87963 0.76734 0.89879 1.17921 1.17422 0.83110 0.76417 0.88791 0.90449 0.88405 0.89422 0.81076 0.83582 0.80129 0.90207 0.87961 0.82265 0.81951 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.34 12.82 -35.23 -0.45 -0.79 16 2 C -0.07 0.06 2.81 36.01 0.10 0.16 16 3 Si 0.68 -1.31 29.87 -169.99 -5.08 -6.39 16 4 C -0.13 -0.12 5.38 -104.53 -0.56 -0.69 16 5 C 0.01 0.03 9.38 -38.87 -0.36 -0.34 16 6 C -0.19 -0.29 5.89 -104.82 -0.62 -0.91 16 7 C 0.57 1.37 7.78 -12.33 -0.10 1.27 16 8 O -0.53 -3.21 16.04 5.32 0.09 -3.13 16 9 N -0.71 0.45 5.22 -53.96 -0.28 0.17 16 10 C 0.12 -0.10 4.30 -67.11 -0.29 -0.39 16 11 H 0.11 0.08 7.50 -51.93 -0.39 -0.31 16 12 C -0.13 0.07 7.45 -25.77 -0.19 -0.12 16 13 C -0.12 0.29 3.72 -89.66 -0.33 -0.04 16 14 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 15 C 0.14 -0.32 6.35 -4.04 -0.03 -0.35 16 16 N -0.37 -0.28 3.68 -61.36 -0.23 -0.50 16 17 C 0.05 -0.01 11.45 -17.22 -0.20 -0.20 16 18 C -0.27 -0.20 10.80 -40.01 -0.43 -0.63 16 19 C 0.04 0.07 12.03 -17.36 -0.21 -0.14 16 20 N -0.29 -0.89 12.42 30.63 0.38 -0.51 16 21 C -0.14 0.48 7.38 -25.92 -0.19 0.29 16 22 C 0.14 0.04 10.71 -17.13 -0.18 -0.15 16 23 N -0.48 -0.79 10.35 -12.91 -0.13 -0.92 16 24 C 0.13 0.10 9.84 -17.47 -0.17 -0.07 16 25 H 0.38 -1.32 8.74 45.56 0.40 -0.92 16 26 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 27 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 28 H -0.25 -0.24 7.05 56.52 0.40 0.16 16 29 H 0.15 0.35 7.74 -52.49 -0.41 -0.05 16 30 H 0.40 -1.24 6.77 -40.82 -0.28 -1.52 16 31 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 32 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 33 H 0.10 -0.45 8.07 -51.93 -0.42 -0.87 16 34 H 0.09 -0.21 7.85 -51.93 -0.41 -0.62 16 35 H 0.17 -0.58 8.06 -52.49 -0.42 -1.00 16 36 H 0.15 -0.15 8.06 -52.48 -0.42 -0.57 16 37 H 0.18 -0.12 8.06 -52.49 -0.42 -0.54 16 38 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 39 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 40 H 0.16 -0.48 6.42 -52.49 -0.34 -0.81 16 41 H 0.16 -0.22 4.87 -52.49 -0.26 -0.48 16 LS Contribution 350.35 15.07 5.28 5.28 Total: 0.00 -10.56 350.35 -9.26 -19.83 By element: Atomic # 1 Polarization: -5.66 SS G_CDS: -5.07 Total: -10.74 kcal Atomic # 6 Polarization: 1.47 SS G_CDS: -3.76 Total: -2.30 kcal Atomic # 7 Polarization: -1.50 SS G_CDS: -0.26 Total: -1.76 kcal Atomic # 8 Polarization: -3.56 SS G_CDS: -0.37 Total: -3.92 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.08 Total: -6.39 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -10.56 -9.26 -19.83 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.889 kcal (2) G-P(sol) polarization free energy of solvation -10.564 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 98.325 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.264 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.828 kcal (6) G-S(sol) free energy of system = (1) + (5) 89.061 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds