Wall clock time and date at job start Sun Mar 7 2021 04:35:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.36412 * 125.79972 * 2 1 4 4 C 1.47382 * 127.19183 * 359.97438 * 3 2 1 5 5 O 1.21610 * 120.00318 * 359.70903 * 4 3 2 6 6 N 1.34783 * 119.99647 * 179.71019 * 4 3 2 7 7 C 1.46502 * 119.99683 * 179.97438 * 6 4 3 8 8 H 1.09007 * 112.90475 * 23.75266 * 7 6 4 9 9 C 1.53779 * 113.61301 * 154.99921 * 7 6 4 10 10 C 1.53787 * 87.07963 * 89.11687 * 9 7 6 11 11 H 1.08994 * 113.61447 * 270.88515 * 10 9 7 12 12 C 1.52997 * 113.61251 * 139.97890 * 10 9 7 13 13 N 1.46498 * 109.47070 * 175.00109 * 12 10 9 14 14 C 1.34951 * 126.03669 * 125.00221 * 13 12 10 15 15 C 1.35322 * 107.74580 * 179.97438 * 14 13 12 16 16 C 1.39861 * 107.91998 * 359.97438 * 15 14 13 17 17 N 1.30843 * 108.20504 * 359.74453 * 16 15 14 18 18 C 1.53779 * 113.61564 * 252.49989 * 7 6 4 19 19 C 1.47025 * 105.61479 * 179.73606 * 3 2 1 20 20 C 1.34179 * 105.95385 * 0.25829 * 19 3 2 21 21 C 1.50696 * 125.43688 * 180.02562 * 20 19 3 22 22 O 1.42900 * 109.47039 * 65.00063 * 21 20 19 23 23 Si 1.86301 * 109.46987 * 185.00185 * 21 20 19 24 24 O 1.33654 * 125.80152 * 180.18590 * 2 1 3 25 25 H 1.09002 * 109.47136 * 90.00384 * 1 2 3 26 26 H 1.09002 * 109.47088 * 210.00219 * 1 2 3 27 27 H 1.08993 * 109.47081 * 330.00412 * 1 2 3 28 28 H 0.96996 * 119.99920 * 0.02562 * 6 4 3 29 29 H 1.08997 * 113.61646 * 334.57319 * 9 7 6 30 30 H 1.09000 * 113.61527 * 203.66590 * 9 7 6 31 31 H 1.08998 * 109.47573 * 295.00161 * 12 10 9 32 32 H 1.09003 * 109.47157 * 55.00680 * 12 10 9 33 33 H 1.08004 * 126.12827 * 359.95637 * 14 13 12 34 34 H 1.08002 * 126.03531 * 180.02562 * 15 14 13 35 35 H 1.08003 * 125.90094 * 180.02562 * 16 15 14 36 36 H 1.09002 * 113.61557 * 156.33711 * 18 7 6 37 37 H 1.09004 * 113.61501 * 25.43131 * 18 7 6 38 38 H 1.08001 * 127.02284 * 180.27953 * 19 3 2 39 39 H 1.08998 * 109.47328 * 304.99914 * 21 20 19 40 40 H 0.96708 * 113.99733 * 179.97438 * 22 21 20 41 41 H 1.48504 * 109.99754 * 299.99994 * 23 21 20 42 42 H 1.48501 * 110.00318 * 61.31701 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8739 2.5158 -0.0005 5 8 0.6889 2.7892 -0.0064 6 7 2.7930 3.5016 0.0055 7 6 2.3645 4.9025 0.0044 8 1 1.3593 5.0390 0.4034 9 6 3.4021 5.8645 0.6065 10 6 3.9921 5.9884 -0.8083 11 1 4.7559 5.2430 -1.0297 12 6 4.4257 7.4106 -1.1691 13 7 5.0795 7.4040 -2.4801 14 6 4.7336 8.1592 -3.5437 15 6 5.5799 7.8585 -4.5558 16 6 6.4740 6.8868 -4.0948 17 7 6.1787 6.6178 -2.8489 18 6 2.5969 5.6168 -1.3375 19 6 3.6849 0.5991 0.0065 20 6 3.5860 -0.7390 0.0039 21 6 4.7459 -1.7010 0.0092 22 8 5.4690 -1.5686 1.2346 23 14 4.1079 -3.4441 -0.1503 24 8 2.2889 -1.0840 -0.0035 25 1 -0.3633 -0.0001 -1.0277 26 1 -0.3633 -0.8900 0.5139 27 1 -0.3633 0.8900 0.5137 28 1 3.7381 3.2834 0.0097 29 1 4.0753 5.3897 1.3202 30 1 2.9709 6.7923 0.9825 31 1 3.5507 8.0597 -1.2028 32 1 5.1231 7.7797 -0.4172 33 1 3.9257 8.8750 -3.5806 34 1 5.5677 8.2928 -5.5445 35 1 7.2734 6.4393 -4.6669 36 1 1.9455 6.4768 -1.4929 37 1 2.6200 4.9418 -2.1932 38 1 4.5928 1.1840 0.0125 39 1 5.4067 -1.4780 -0.8285 40 1 6.2311 -2.1595 1.3074 41 1 3.2056 -3.7605 0.9860 42 1 3.3811 -3.6034 -1.4355 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:35:29 Heat of formation + Delta-G solvation = 60.992459 kcal Electronic energy + Delta-G solvation = -26028.753081 eV Core-core repulsion = 22173.219187 eV Total energy + Delta-G solvation = -3855.533894 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.141 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -43.75416 -42.06898 -41.11339 -39.31666 -38.00926 -35.09432 -34.19362 -33.43264 -33.00946 -30.96559 -29.57199 -28.56990 -26.87508 -25.96639 -24.70964 -23.76720 -22.36362 -21.94616 -21.60610 -20.69016 -20.11907 -18.82647 -18.49844 -18.15537 -17.29280 -17.15779 -16.97590 -16.49423 -16.06182 -15.84689 -15.65420 -15.56111 -15.34903 -14.75032 -14.59866 -14.33436 -14.23252 -14.10888 -14.08599 -13.96609 -13.79743 -13.62694 -13.55220 -13.12738 -12.87267 -12.58089 -12.31628 -12.10421 -11.71487 -11.55439 -11.41553 -10.99968 -10.88019 -10.55684 -10.28342 -10.09438 -9.55910 -9.45214 -5.14395 0.28299 0.81606 1.02379 1.08861 1.48316 1.59081 1.62685 1.98115 2.00534 2.09852 2.33027 3.17176 3.27639 3.37119 3.41618 3.50460 3.66581 3.71695 3.75670 3.89275 3.96049 4.06706 4.09069 4.16341 4.30636 4.36906 4.39703 4.52764 4.53100 4.55261 4.60999 4.67088 4.71315 4.82007 4.89040 4.90306 4.95130 5.06041 5.12588 5.15997 5.20905 5.52942 5.78206 5.92280 6.11508 6.39924 6.47366 6.82930 7.21693 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.095 3.905 3 C -0.253 4.253 4 C 0.598 3.402 5 O -0.537 6.537 6 N -0.706 5.706 7 C 0.124 3.876 8 H 0.108 0.892 9 C -0.138 4.138 10 C -0.123 4.123 11 H 0.104 0.896 12 C 0.143 3.857 13 N -0.370 5.370 14 C 0.052 3.948 15 C -0.276 4.276 16 C 0.044 3.956 17 N -0.297 5.297 18 C -0.146 4.146 19 C -0.142 4.142 20 C -0.014 4.014 21 C -0.035 4.035 22 O -0.543 6.543 23 Si 0.709 3.291 24 O -0.175 6.175 25 H 0.093 0.907 26 H 0.080 0.920 27 H 0.113 0.887 28 H 0.402 0.598 29 H 0.080 0.920 30 H 0.101 0.899 31 H 0.098 0.902 32 H 0.087 0.913 33 H 0.172 0.828 34 H 0.147 0.853 35 H 0.182 0.818 36 H 0.093 0.907 37 H 0.072 0.928 38 H 0.160 0.840 39 H 0.096 0.904 40 H 0.391 0.609 41 H -0.249 1.249 42 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.291 -0.292 -0.521 3.345 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C 0.042 3.958 3 C -0.257 4.257 4 C 0.387 3.613 5 O -0.416 6.416 6 N -0.357 5.357 7 C 0.018 3.982 8 H 0.126 0.874 9 C -0.176 4.176 10 C -0.142 4.142 11 H 0.122 0.878 12 C 0.021 3.979 13 N -0.152 5.152 14 C -0.094 4.094 15 C -0.305 4.305 16 C -0.142 4.142 17 N -0.118 5.118 18 C -0.185 4.185 19 C -0.161 4.161 20 C -0.061 4.061 21 C -0.145 4.145 22 O -0.351 6.351 23 Si 0.608 3.392 24 O -0.073 6.073 25 H 0.111 0.889 26 H 0.099 0.901 27 H 0.131 0.869 28 H 0.237 0.763 29 H 0.099 0.901 30 H 0.119 0.881 31 H 0.116 0.884 32 H 0.105 0.895 33 H 0.189 0.811 34 H 0.164 0.836 35 H 0.199 0.801 36 H 0.111 0.889 37 H 0.091 0.909 38 H 0.177 0.823 39 H 0.113 0.887 40 H 0.240 0.760 41 H -0.173 1.173 42 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges 1.410 -1.132 0.681 1.932 hybrid contribution 0.470 1.258 -0.931 1.634 sum 1.880 0.126 -0.250 1.901 Atomic orbital electron populations 1.20714 0.83236 1.05476 1.04798 1.22945 0.94083 0.82770 0.95968 1.21083 0.93204 0.93710 1.17693 1.17113 0.85351 0.83584 0.75254 1.90772 1.16479 1.83932 1.50393 1.45418 1.09728 1.05056 1.75513 1.21766 0.99675 0.79893 0.96844 0.87383 1.23355 0.98097 1.00188 0.95983 1.22973 0.97773 0.96649 0.96835 0.87752 1.21790 0.97022 0.98040 0.81007 1.48716 1.24428 1.31227 1.10852 1.22598 1.01003 0.97868 0.87917 1.21554 1.01343 1.06233 1.01376 1.23916 1.00099 0.97648 0.92577 1.77318 1.02512 1.16759 1.15239 1.23528 0.95957 1.00951 0.98067 1.22547 0.96464 0.93257 1.03865 1.21053 0.82091 0.94183 1.08782 1.23799 0.91793 1.08364 0.90543 1.86463 1.46290 1.66276 1.36064 0.95265 0.85169 0.77415 0.81332 1.83696 1.16500 1.35349 1.71741 0.88905 0.90069 0.86892 0.76286 0.90136 0.88075 0.88377 0.89506 0.81063 0.83561 0.80096 0.88882 0.90933 0.82268 0.88677 0.75994 1.17298 1.17698 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.14 9.88 36.01 0.36 0.22 16 2 C 0.10 0.36 7.37 -34.96 -0.26 0.11 16 3 C -0.25 -0.93 6.31 -103.27 -0.65 -1.58 16 4 C 0.60 2.30 7.81 -12.54 -0.10 2.20 16 5 O -0.54 -3.39 14.45 5.27 0.08 -3.31 16 6 N -0.71 -0.69 5.26 -54.10 -0.28 -0.97 16 7 C 0.12 -0.02 4.32 -67.12 -0.29 -0.31 16 8 H 0.11 0.13 7.47 -51.93 -0.39 -0.26 16 9 C -0.14 0.33 7.39 -25.92 -0.19 0.14 16 10 C -0.12 0.18 3.75 -89.80 -0.34 -0.16 16 11 H 0.10 0.03 7.97 -51.93 -0.41 -0.38 16 12 C 0.14 -0.23 6.34 -4.04 -0.03 -0.25 16 13 N -0.37 -0.49 3.68 -61.36 -0.23 -0.71 16 14 C 0.05 0.02 11.45 -17.22 -0.20 -0.17 16 15 C -0.28 -0.32 10.80 -40.01 -0.43 -0.75 16 16 C 0.04 0.09 12.02 -17.37 -0.21 -0.12 16 17 N -0.30 -1.03 12.28 30.62 0.38 -0.65 16 18 C -0.15 0.09 7.43 -25.92 -0.19 -0.10 16 19 C -0.14 -0.33 10.48 -37.45 -0.39 -0.73 16 20 C -0.01 -0.04 6.22 -35.74 -0.22 -0.26 16 21 C -0.04 0.02 2.96 36.00 0.11 0.12 16 22 O -0.54 0.34 12.86 -35.23 -0.45 -0.11 16 23 Si 0.71 -0.69 32.09 -169.99 -5.46 -6.15 16 24 O -0.18 -0.76 8.90 7.64 0.07 -0.69 16 25 H 0.09 0.05 8.14 -51.93 -0.42 -0.37 16 26 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 27 H 0.11 0.27 6.49 -51.93 -0.34 -0.07 16 28 H 0.40 -0.28 7.87 -40.82 -0.32 -0.60 16 29 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.10 -0.39 8.10 -51.93 -0.42 -0.81 16 31 H 0.10 -0.38 7.77 -51.93 -0.40 -0.78 16 32 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.17 -0.47 8.06 -52.48 -0.42 -0.90 16 34 H 0.15 -0.09 8.06 -52.49 -0.42 -0.51 16 35 H 0.18 -0.10 8.06 -52.48 -0.42 -0.53 16 36 H 0.09 -0.16 7.90 -51.93 -0.41 -0.57 16 37 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 38 H 0.16 -0.02 7.74 -52.49 -0.41 -0.42 16 39 H 0.10 -0.28 7.96 -51.93 -0.41 -0.69 16 40 H 0.39 -2.38 8.74 45.56 0.40 -1.98 16 41 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 42 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 LS Contribution 361.18 15.07 5.44 5.44 Total: 0.00 -10.85 361.18 -9.18 -20.04 By element: Atomic # 1 Polarization: -5.55 SS G_CDS: -5.70 Total: -11.24 kcal Atomic # 6 Polarization: 1.40 SS G_CDS: -3.03 Total: -1.64 kcal Atomic # 7 Polarization: -2.20 SS G_CDS: -0.13 Total: -2.34 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -0.31 Total: -4.11 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.46 Total: -6.15 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -10.85 -9.18 -20.04 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.029 kcal (2) G-P(sol) polarization free energy of solvation -10.852 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 70.177 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.185 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.037 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.992 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds