Wall clock time and date at job start Sun Mar 7 2021 04:35:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.38053 * 119.80725 * 300.00041 * 4 2 1 6 6 C 1.38710 * 120.08619 * 180.02562 * 5 4 2 7 7 O 1.35652 * 120.14943 * 180.02562 * 6 5 4 8 8 C 1.40136 * 119.69885 * 359.97438 * 6 5 4 9 9 C 1.47538 * 120.19079 * 180.02562 * 8 6 5 10 10 O 1.21590 * 120.00225 * 0.02562 * 9 8 6 11 11 N 1.34781 * 120.00125 * 179.97438 * 9 8 6 12 12 C 1.46500 * 120.00191 * 180.02562 * 11 9 8 13 13 H 1.08998 * 112.84717 * 23.80665 * 12 11 9 14 14 C 1.53777 * 113.61267 * 155.00375 * 12 11 9 15 15 C 1.53783 * 87.08135 * 89.11796 * 14 12 11 16 16 H 1.09003 * 113.60813 * 270.88191 * 15 14 12 17 17 C 1.52999 * 113.61364 * 140.06564 * 15 14 12 18 18 N 1.46500 * 109.46945 * 174.99916 * 17 15 14 19 19 C 1.34945 * 126.03713 * 125.00141 * 18 17 15 20 20 C 1.35317 * 107.74405 * 179.97438 * 19 18 17 21 21 C 1.39864 * 107.92256 * 359.97438 * 20 19 18 22 22 N 1.30839 * 108.20143 * 359.74264 * 21 20 19 23 23 C 1.53775 * 87.08062 * 25.42868 * 15 14 12 24 24 C 1.39705 * 119.62077 * 0.02562 * 8 6 5 25 25 C 1.37792 * 119.90559 * 359.74539 * 24 8 6 26 26 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 27 27 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 28 28 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 29 29 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 30 30 H 1.07999 * 119.95707 * 0.02562 * 5 4 2 31 31 H 0.96689 * 114.00743 * 90.00151 * 7 6 5 32 32 H 0.96998 * 119.99686 * 0.02562 * 11 9 8 33 33 H 1.09001 * 113.61124 * 203.66836 * 14 12 11 34 34 H 1.09001 * 113.61546 * 334.56180 * 14 12 11 35 35 H 1.09000 * 109.47119 * 294.99628 * 17 15 14 36 36 H 1.09001 * 109.47006 * 54.99446 * 17 15 14 37 37 H 1.07996 * 126.12565 * 359.97438 * 19 18 17 38 38 H 1.07997 * 126.03809 * 179.97438 * 20 19 18 39 39 H 1.07997 * 125.89915 * 179.97438 * 21 20 19 40 40 H 1.09003 * 113.61853 * 220.02023 * 23 15 14 41 41 H 1.09002 * 113.61522 * 89.11875 * 23 15 14 42 42 H 1.08002 * 120.05044 * 179.97438 * 24 8 6 43 43 H 1.07993 * 119.85268 * 180.24954 * 25 24 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.5954 -2.0322 -1.4449 6 6 2.0550 -2.6919 -2.5752 7 8 1.7253 -3.9905 -2.7874 8 6 2.8606 -2.0104 -3.4973 9 6 3.3551 -2.7014 -4.7035 10 8 3.0633 -3.8653 -4.9000 11 7 4.1293 -2.0422 -5.5882 12 6 4.6197 -2.7281 -6.7861 13 1 3.9984 -3.5767 -7.0722 14 6 4.9398 -1.7782 -7.9522 15 6 6.3588 -1.6679 -7.3696 16 1 6.4692 -0.8676 -6.6378 17 6 7.4587 -1.6566 -8.4330 18 7 8.7560 -1.4297 -7.7912 19 6 9.8455 -2.2182 -7.9024 20 6 10.8329 -1.6641 -7.1614 21 6 10.3298 -0.4968 -6.5779 22 7 9.0867 -0.3521 -6.9594 23 6 6.1226 -3.0505 -6.7395 24 6 3.1930 -0.6730 -3.2680 25 6 2.7237 -0.0319 -2.1422 26 1 -0.3934 0.4417 -0.7651 27 1 1.7923 -0.5139 0.8900 28 1 1.5879 2.4585 -1.2243 29 1 1.5615 2.4679 1.2085 30 1 0.9739 -2.5532 -0.7317 31 1 0.9089 -4.1118 -3.2911 32 1 4.3617 -1.1136 -5.4316 33 1 4.9053 -2.2595 -8.9296 34 1 4.3805 -0.8431 -7.9199 35 1 7.4727 -2.6153 -8.9515 36 1 7.2632 -0.8588 -9.1495 37 1 9.9165 -3.1283 -8.4794 38 1 11.8328 -2.0543 -7.0417 39 1 10.8746 0.1719 -5.9279 40 1 6.5182 -3.1428 -5.7279 41 1 6.4115 -3.8798 -7.3852 42 1 3.8138 -0.1413 -3.9739 43 1 2.9778 1.0032 -1.9678 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:35:38 Heat of formation + Delta-G solvation = 35.579653 kcal Electronic energy + Delta-G solvation = -27317.876990 eV Core-core repulsion = 23333.014974 eV Total energy + Delta-G solvation = -3984.862017 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.11306 -41.71838 -40.70525 -39.24425 -38.37219 -37.25145 -35.07755 -33.71881 -32.46446 -31.14826 -30.96325 -28.72809 -27.47007 -26.89845 -24.58729 -23.97672 -23.41769 -22.06024 -21.75250 -21.61959 -20.26453 -19.45130 -18.81419 -18.31608 -18.18452 -17.36276 -16.90355 -16.54745 -16.38886 -16.31660 -16.08823 -15.82839 -15.62208 -15.37738 -15.21806 -14.92175 -14.60701 -14.43685 -14.24592 -13.94886 -13.76180 -13.66643 -13.57183 -13.28175 -13.02593 -12.85759 -12.43847 -12.34054 -12.12849 -11.75380 -11.65413 -11.56769 -11.43125 -10.90867 -10.69383 -10.29604 -10.21047 -10.06223 -9.82926 -9.45991 -5.05851 -0.44525 0.07237 1.01545 1.14038 1.48921 1.57887 1.72451 1.86729 1.97025 2.00039 2.54101 3.04249 3.24182 3.26451 3.33950 3.37021 3.40953 3.57665 3.63930 3.72063 3.86514 3.95140 3.95579 4.04721 4.17536 4.28951 4.33110 4.35129 4.50880 4.52013 4.54356 4.64292 4.66911 4.69446 4.87043 4.89106 4.92669 4.93250 5.03895 5.09768 5.15544 5.16205 5.47326 5.50209 5.77622 6.10566 6.26118 6.39431 6.67960 6.82052 7.17393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.081 4.081 3 Si 0.689 3.311 4 C -0.074 4.074 5 C -0.129 4.129 6 C 0.173 3.827 7 O -0.476 6.476 8 C -0.165 4.165 9 C 0.562 3.438 10 O -0.516 6.516 11 N -0.712 5.712 12 C 0.124 3.876 13 H 0.108 0.892 14 C -0.138 4.138 15 C -0.123 4.123 16 H 0.105 0.895 17 C 0.143 3.857 18 N -0.370 5.370 19 C 0.053 3.947 20 C -0.275 4.275 21 C 0.044 3.956 22 N -0.297 5.297 23 C -0.146 4.146 24 C -0.064 4.064 25 C -0.135 4.135 26 H 0.377 0.623 27 H 0.124 0.876 28 H -0.258 1.258 29 H -0.255 1.255 30 H 0.141 0.859 31 H 0.398 0.602 32 H 0.400 0.600 33 H 0.101 0.899 34 H 0.079 0.921 35 H 0.098 0.902 36 H 0.086 0.914 37 H 0.172 0.828 38 H 0.147 0.853 39 H 0.182 0.818 40 H 0.073 0.927 41 H 0.093 0.907 42 H 0.133 0.867 43 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.716 2.697 -2.979 4.370 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.191 4.191 3 Si 0.589 3.411 4 C -0.075 4.075 5 C -0.148 4.148 6 C 0.127 3.873 7 O -0.287 6.287 8 C -0.169 4.169 9 C 0.350 3.650 10 O -0.391 6.391 11 N -0.364 5.364 12 C 0.018 3.982 13 H 0.126 0.874 14 C -0.176 4.176 15 C -0.142 4.142 16 H 0.123 0.877 17 C 0.021 3.979 18 N -0.153 5.153 19 C -0.094 4.094 20 C -0.305 4.305 21 C -0.142 4.142 22 N -0.119 5.119 23 C -0.185 4.185 24 C -0.083 4.083 25 C -0.153 4.153 26 H 0.225 0.775 27 H 0.142 0.858 28 H -0.182 1.182 29 H -0.179 1.179 30 H 0.159 0.841 31 H 0.256 0.744 32 H 0.236 0.764 33 H 0.119 0.881 34 H 0.098 0.902 35 H 0.116 0.884 36 H 0.105 0.895 37 H 0.189 0.811 38 H 0.164 0.836 39 H 0.199 0.801 40 H 0.092 0.908 41 H 0.111 0.889 42 H 0.151 0.849 43 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.685 2.930 -2.273 3.771 hybrid contribution -0.402 -0.213 -0.804 0.924 sum 0.283 2.718 -3.077 4.115 Atomic orbital electron populations 1.86630 1.17321 1.79970 1.49350 1.25159 0.84261 1.11372 0.98259 0.94889 0.91630 0.73991 0.80575 1.20399 0.96524 0.94263 0.96271 1.21344 1.01167 0.93944 0.98309 1.18502 0.93427 0.83588 0.91801 1.84759 1.47400 1.19525 1.77033 1.20396 1.04835 0.94844 0.96776 1.18043 0.78257 0.86291 0.82445 1.90837 1.57000 1.15753 1.75540 1.45578 1.52401 1.15510 1.22921 1.21760 0.95259 0.96413 0.84747 0.87435 1.23356 0.95134 1.00599 0.98528 1.22974 0.93557 0.99465 0.98236 0.87731 1.21783 0.78716 1.02940 0.94426 1.48707 1.10312 1.18274 1.37971 1.22593 0.87529 0.97865 1.01378 1.21556 1.01527 1.00085 1.07311 1.23916 0.92369 0.97887 1.00011 1.77305 1.16193 1.07701 1.10654 1.23521 0.96127 0.96605 1.02248 1.21145 0.97508 0.92608 0.97046 1.20953 0.99399 1.00243 0.94674 0.77532 0.85845 1.18240 1.17937 0.84115 0.74363 0.76436 0.88098 0.90185 0.88398 0.89530 0.81076 0.83560 0.80073 0.90847 0.88895 0.84879 0.84619 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.11 12.76 -35.23 -0.45 -0.56 16 2 C -0.08 0.10 2.81 36.01 0.10 0.20 16 3 Si 0.69 -1.40 29.77 -169.99 -5.06 -6.46 16 4 C -0.07 0.06 5.39 -104.57 -0.56 -0.51 16 5 C -0.13 -0.08 9.53 -39.47 -0.38 -0.45 16 6 C 0.17 0.32 6.72 -38.69 -0.26 0.06 16 7 O -0.48 -1.34 11.58 -40.53 -0.47 -1.81 16 8 C -0.16 -0.19 5.89 -104.85 -0.62 -0.80 16 9 C 0.56 1.35 7.76 -12.47 -0.10 1.26 16 10 O -0.52 -3.08 14.76 -16.59 -0.24 -3.33 16 11 N -0.71 0.43 5.21 -54.06 -0.28 0.15 16 12 C 0.12 -0.13 4.32 -67.12 -0.29 -0.42 16 13 H 0.11 0.05 7.46 -51.93 -0.39 -0.34 16 14 C -0.14 0.47 7.39 -25.92 -0.19 0.27 16 15 C -0.12 0.28 3.74 -89.81 -0.34 -0.06 16 16 H 0.10 -0.08 7.97 -51.93 -0.41 -0.50 16 17 C 0.14 -0.31 6.35 -4.04 -0.03 -0.34 16 18 N -0.37 -0.29 3.68 -61.37 -0.23 -0.52 16 19 C 0.05 0.00 11.45 -17.22 -0.20 -0.19 16 20 C -0.28 -0.22 10.80 -40.01 -0.43 -0.65 16 21 C 0.04 0.07 12.03 -17.37 -0.21 -0.14 16 22 N -0.30 -0.85 12.28 30.62 0.38 -0.48 16 23 C -0.15 0.18 7.43 -25.92 -0.19 -0.01 16 24 C -0.06 0.09 9.54 -39.20 -0.37 -0.28 16 25 C -0.14 0.24 8.65 -39.63 -0.34 -0.10 16 26 H 0.38 -1.04 8.70 45.56 0.40 -0.64 16 27 H 0.12 -0.21 7.96 -51.93 -0.41 -0.63 16 28 H -0.26 0.11 7.11 56.52 0.40 0.51 16 29 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 30 H 0.14 0.05 8.06 -52.49 -0.42 -0.37 16 31 H 0.40 -0.36 9.06 45.56 0.41 0.05 16 32 H 0.40 -1.14 6.73 -40.82 -0.27 -1.42 16 33 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 34 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 35 H 0.10 -0.42 7.78 -51.93 -0.40 -0.82 16 36 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 37 H 0.17 -0.53 8.06 -52.49 -0.42 -0.95 16 38 H 0.15 -0.13 8.06 -52.49 -0.42 -0.56 16 39 H 0.18 -0.19 8.06 -52.49 -0.42 -0.61 16 40 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 41 H 0.09 -0.20 7.90 -51.93 -0.41 -0.61 16 42 H 0.13 -0.56 6.40 -52.49 -0.34 -0.89 16 43 H 0.14 -0.51 4.85 -52.49 -0.25 -0.77 16 LS Contribution 363.62 15.07 5.48 5.48 Total: 0.00 -10.86 363.62 -9.94 -20.81 By element: Atomic # 1 Polarization: -6.45 SS G_CDS: -4.66 Total: -11.11 kcal Atomic # 6 Polarization: 2.23 SS G_CDS: -4.40 Total: -2.17 kcal Atomic # 7 Polarization: -0.72 SS G_CDS: -0.13 Total: -0.85 kcal Atomic # 8 Polarization: -4.53 SS G_CDS: -1.16 Total: -5.69 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.06 Total: -6.46 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -10.86 -9.94 -20.81 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.385 kcal (2) G-P(sol) polarization free energy of solvation -10.863 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.522 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.942 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.805 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.580 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds