Wall clock time and date at job start Sun Mar 7 2021 04:35:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.37791 * 119.84639 * 2 1 4 4 C 1.39704 * 119.90541 * 180.25574 * 3 2 1 5 5 C 1.47544 * 120.19022 * 179.78975 * 4 3 2 6 6 O 1.21586 * 119.99894 * 179.72059 * 5 4 3 7 7 N 1.34776 * 119.99842 * 359.72716 * 5 4 3 8 8 C 1.46506 * 119.99955 * 180.02562 * 7 5 4 9 9 H 1.08998 * 112.84797 * 23.79888 * 8 7 5 10 10 C 1.53774 * 113.61271 * 154.99574 * 8 7 5 11 11 C 1.53784 * 87.07996 * 89.11665 * 10 8 7 12 12 H 1.09006 * 113.61085 * 270.79240 * 11 10 8 13 13 C 1.53003 * 113.61593 * 139.98234 * 11 10 8 14 14 N 1.46502 * 109.47267 * 174.99846 * 13 11 10 15 15 C 1.34948 * 126.03993 * 124.99155 * 14 13 11 16 16 C 1.35315 * 107.74520 * 179.97438 * 15 14 13 17 17 C 1.39870 * 107.92205 * 0.02562 * 16 15 14 18 18 N 1.30839 * 108.19862 * 359.97438 * 17 16 15 19 19 C 1.53772 * 87.08248 * 25.42806 * 11 10 8 20 20 C 1.40131 * 119.62234 * 359.51645 * 4 3 2 21 21 O 1.35648 * 120.15656 * 180.27250 * 20 4 3 22 22 C 1.38712 * 119.69562 * 0.25223 * 20 4 3 23 23 C 1.50702 * 119.95863 * 180.02562 * 22 20 4 24 24 O 1.42905 * 109.46669 * 284.99565 * 23 22 20 25 25 Si 1.86297 * 109.47187 * 164.99935 * 23 22 20 26 26 C 1.38055 * 120.08470 * 359.97438 * 22 20 4 27 27 H 1.08999 * 109.47062 * 270.22613 * 1 2 3 28 28 H 1.08992 * 109.47940 * 30.23225 * 1 2 3 29 29 H 1.09009 * 109.46894 * 150.23648 * 1 2 3 30 30 H 1.08005 * 120.04661 * 0.04899 * 3 2 1 31 31 H 0.96996 * 120.00161 * 359.97438 * 7 5 4 32 32 H 1.08995 * 113.62260 * 334.56474 * 10 8 7 33 33 H 1.08997 * 113.68772 * 203.66847 * 10 8 7 34 34 H 1.08994 * 109.47234 * 54.99610 * 13 11 10 35 35 H 1.09001 * 109.46792 * 294.99158 * 13 11 10 36 36 H 1.08007 * 126.12251 * 0.27272 * 15 14 13 37 37 H 1.08001 * 126.03475 * 179.97438 * 16 15 14 38 38 H 1.07997 * 125.89701 * 180.02562 * 17 16 15 39 39 H 1.09000 * 113.61338 * 89.12118 * 19 11 10 40 40 H 1.09003 * 113.61572 * 220.01905 * 19 11 10 41 41 H 0.96707 * 113.99703 * 89.99753 * 21 20 4 42 42 H 1.08996 * 109.46949 * 44.99589 * 23 22 20 43 43 H 0.96702 * 113.99555 * 179.97438 * 24 23 22 44 44 H 1.48495 * 109.99980 * 298.67950 * 25 23 22 45 45 H 1.48504 * 110.00091 * 60.00155 * 25 23 22 46 46 H 1.07994 * 119.80505 * 179.97438 * 26 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1927 1.1951 0.0000 4 6 3.5897 1.1966 -0.0054 5 6 4.3304 2.4727 -0.0101 6 8 5.5462 2.4699 -0.0097 7 7 3.6591 3.6414 -0.0148 8 6 4.3945 4.9085 -0.0200 9 1 5.4018 4.8116 -0.4251 10 6 3.5992 6.0797 -0.6202 11 6 3.0602 6.3371 0.7969 12 1 2.1473 5.7861 1.0235 13 6 2.9626 7.8213 1.1554 14 7 2.3311 7.9658 2.4694 15 6 2.8450 8.6246 3.5291 16 6 1.9578 8.5259 4.5460 17 6 0.8644 7.7808 4.0924 18 7 1.0871 7.4447 2.8476 19 6 4.3372 5.6594 1.3207 20 6 4.2837 -0.0208 -0.0005 21 8 5.6401 -0.0321 -0.0001 22 6 3.5771 -1.2145 0.0043 23 6 4.3174 -2.5272 0.0102 24 8 4.8554 -2.7763 -1.2901 25 14 3.1445 -3.8995 0.4703 26 6 2.1966 -1.2016 0.0049 27 1 -0.3633 0.0041 1.0277 28 1 -0.3635 0.8878 -0.5174 29 1 -0.3633 -0.8922 -0.5102 30 1 1.6510 2.1295 0.0008 31 1 2.6892 3.6436 -0.0154 32 1 2.8321 5.7689 -1.3294 33 1 4.2266 6.8853 -1.0016 34 1 2.3633 8.3376 0.4055 35 1 3.9623 8.2548 1.1832 36 1 3.7924 9.1424 3.5586 37 1 2.0738 8.9473 5.5336 38 1 -0.0125 7.5274 4.6696 39 1 5.1676 6.3493 1.4706 40 1 4.1660 5.0090 2.1786 41 1 6.0332 -0.0319 0.8835 42 1 5.1286 -2.4836 0.7369 43 1 5.3465 -3.6064 -1.3600 44 1 2.6024 -3.6687 1.8333 45 1 2.0338 -3.9694 -0.5130 46 1 1.6511 -2.1336 0.0082 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:35:42 Heat of formation + Delta-G solvation = 32.995349 kcal Electronic energy + Delta-G solvation = -29641.274397 eV Core-core repulsion = 25500.762698 eV Total energy + Delta-G solvation = -4140.511699 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.12584 -41.77001 -40.76143 -39.15044 -38.02694 -37.51465 -35.08144 -33.77387 -33.21232 -32.47297 -30.97454 -28.63939 -27.68926 -26.89955 -26.79683 -25.52590 -23.98344 -22.07110 -21.89537 -21.61910 -21.58184 -20.25214 -19.48110 -18.49948 -18.42544 -18.09203 -17.65357 -16.90672 -16.73635 -16.43923 -16.08431 -15.84134 -15.72668 -15.42559 -15.22526 -14.95035 -14.84922 -14.62673 -14.57715 -14.31488 -14.26453 -13.94386 -13.74968 -13.64742 -13.58067 -13.21465 -13.01172 -12.89992 -12.72376 -12.44216 -12.34357 -11.98688 -11.76515 -11.65402 -11.57360 -11.43048 -10.79926 -10.31549 -10.29412 -10.22605 -10.04980 -9.55842 -9.47297 -5.05264 -0.37793 0.02122 1.00301 1.19266 1.55484 1.56904 1.73094 1.86786 1.98395 1.99392 2.53317 3.11074 3.25120 3.28417 3.34635 3.38845 3.50833 3.54870 3.67420 3.79879 3.86421 3.94258 3.96583 4.03162 4.05854 4.20472 4.28708 4.33039 4.34929 4.51409 4.51732 4.53084 4.54171 4.63168 4.66996 4.72059 4.86567 4.87343 4.88380 4.92409 4.93009 5.04669 5.13607 5.14068 5.26584 5.48366 5.53533 5.76115 6.09412 6.41305 6.64117 6.74073 6.80768 7.19703 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.096 4.096 3 C -0.066 4.066 4 C -0.164 4.164 5 C 0.564 3.436 6 O -0.514 6.514 7 N -0.712 5.712 8 C 0.124 3.876 9 H 0.108 0.892 10 C -0.138 4.138 11 C -0.123 4.123 12 H 0.104 0.896 13 C 0.142 3.858 14 N -0.370 5.370 15 C 0.053 3.947 16 C -0.275 4.275 17 C 0.043 3.957 18 N -0.297 5.297 19 C -0.146 4.146 20 C 0.193 3.807 21 O -0.465 6.465 22 C -0.108 4.108 23 C -0.063 4.063 24 O -0.538 6.538 25 Si 0.685 3.315 26 C -0.081 4.081 27 H 0.076 0.924 28 H 0.073 0.927 29 H 0.070 0.930 30 H 0.132 0.868 31 H 0.399 0.601 32 H 0.080 0.920 33 H 0.101 0.899 34 H 0.087 0.913 35 H 0.098 0.902 36 H 0.172 0.828 37 H 0.147 0.853 38 H 0.182 0.818 39 H 0.093 0.907 40 H 0.072 0.928 41 H 0.393 0.607 42 H 0.072 0.928 43 H 0.381 0.619 44 H -0.253 1.253 45 H -0.249 1.249 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.081 -0.597 2.168 2.495 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.096 4.096 3 C -0.085 4.085 4 C -0.168 4.168 5 C 0.352 3.648 6 O -0.390 6.390 7 N -0.364 5.364 8 C 0.018 3.982 9 H 0.126 0.874 10 C -0.176 4.176 11 C -0.142 4.142 12 H 0.122 0.878 13 C 0.021 3.979 14 N -0.152 5.152 15 C -0.094 4.094 16 C -0.305 4.305 17 C -0.142 4.142 18 N -0.119 5.119 19 C -0.184 4.184 20 C 0.146 3.854 21 O -0.275 6.275 22 C -0.109 4.109 23 C -0.174 4.174 24 O -0.344 6.344 25 Si 0.586 3.414 26 C -0.099 4.099 27 H 0.095 0.905 28 H 0.092 0.908 29 H 0.089 0.911 30 H 0.150 0.850 31 H 0.235 0.765 32 H 0.098 0.902 33 H 0.120 0.880 34 H 0.105 0.895 35 H 0.116 0.884 36 H 0.189 0.811 37 H 0.164 0.836 38 H 0.199 0.801 39 H 0.111 0.889 40 H 0.090 0.910 41 H 0.251 0.749 42 H 0.090 0.910 43 H 0.229 0.771 44 H -0.178 1.178 45 H -0.174 1.174 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -1.720 -0.850 0.499 1.982 hybrid contribution 0.027 1.139 1.318 1.742 sum -1.693 0.289 1.817 2.501 Atomic orbital electron populations 1.20840 0.89923 1.03579 1.03018 1.19770 0.96855 0.92146 1.00869 1.21119 0.92166 0.98223 0.96999 1.20346 0.93904 0.93398 1.09112 1.17977 0.87279 0.83182 0.76385 1.90832 1.12914 1.87188 1.48044 1.45569 1.10022 1.04888 1.75940 1.21762 0.97291 0.82286 0.96831 0.87370 1.23355 1.00214 0.98149 0.95926 1.22975 0.99575 0.94835 0.96863 0.87782 1.21793 0.97790 0.97404 0.80889 1.48715 1.14652 1.41056 1.10807 1.22598 1.00267 0.98569 0.87923 1.21555 0.96638 1.10949 1.01348 1.23916 0.99753 0.97912 0.92662 1.77307 0.97874 1.21595 1.15092 1.23519 0.97368 0.99510 0.98038 1.18174 0.83932 0.89562 0.93740 1.84805 1.13992 1.95855 1.32897 1.19719 0.93286 0.93853 1.04005 1.24522 1.03470 0.99984 0.89377 1.86554 1.74365 1.45277 1.28214 0.95125 0.80403 0.86058 0.79855 1.21016 0.93007 0.98151 0.97710 0.90536 0.90775 0.91107 0.84994 0.76486 0.90172 0.88046 0.89499 0.88362 0.81052 0.83555 0.80103 0.88861 0.90955 0.74864 0.90979 0.77105 1.17783 1.17373 0.85281 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.16 10.00 36.00 0.36 0.52 16 2 C -0.10 -0.09 5.87 -104.67 -0.61 -0.71 16 3 C -0.07 -0.05 9.18 -39.20 -0.36 -0.41 16 4 C -0.16 -0.50 5.89 -104.85 -0.62 -1.11 16 5 C 0.56 2.08 7.76 -12.47 -0.10 1.99 16 6 O -0.51 -3.59 14.76 -16.59 -0.24 -3.83 16 7 N -0.71 -0.37 5.21 -54.06 -0.28 -0.65 16 8 C 0.12 -0.03 4.32 -67.12 -0.29 -0.32 16 9 H 0.11 0.15 7.46 -51.93 -0.39 -0.24 16 10 C -0.14 0.36 7.39 -25.92 -0.19 0.17 16 11 C -0.12 0.21 3.74 -89.81 -0.34 -0.12 16 12 H 0.10 -0.02 7.96 -51.93 -0.41 -0.43 16 13 C 0.14 -0.26 6.35 -4.04 -0.03 -0.28 16 14 N -0.37 -0.40 3.68 -61.36 -0.23 -0.63 16 15 C 0.05 0.01 11.45 -17.22 -0.20 -0.18 16 16 C -0.28 -0.27 10.80 -40.01 -0.43 -0.70 16 17 C 0.04 0.08 12.03 -17.36 -0.21 -0.13 16 18 N -0.30 -0.95 12.27 30.62 0.38 -0.58 16 19 C -0.15 0.13 7.43 -25.92 -0.19 -0.06 16 20 C 0.19 0.75 6.69 -38.70 -0.26 0.50 16 21 O -0.46 -1.97 10.91 -40.52 -0.44 -2.41 16 22 C -0.11 -0.32 5.30 -104.51 -0.55 -0.87 16 23 C -0.06 -0.04 2.37 36.01 0.09 0.04 16 24 O -0.54 -0.92 12.86 -35.23 -0.45 -1.37 16 25 Si 0.68 -0.77 30.19 -169.99 -5.13 -5.90 16 26 C -0.08 -0.17 8.30 -39.54 -0.33 -0.50 16 27 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 28 H 0.07 -0.18 8.08 -51.93 -0.42 -0.60 16 29 H 0.07 -0.11 8.08 -51.92 -0.42 -0.53 16 30 H 0.13 -0.27 6.40 -52.48 -0.34 -0.61 16 31 H 0.40 -0.63 6.73 -40.82 -0.27 -0.91 16 32 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 33 H 0.10 -0.40 8.10 -51.93 -0.42 -0.82 16 34 H 0.09 -0.18 8.14 -51.93 -0.42 -0.61 16 35 H 0.10 -0.39 7.77 -51.93 -0.40 -0.79 16 36 H 0.17 -0.50 8.06 -52.48 -0.42 -0.92 16 37 H 0.15 -0.11 8.06 -52.49 -0.42 -0.53 16 38 H 0.18 -0.14 8.06 -52.49 -0.42 -0.56 16 39 H 0.09 -0.18 7.90 -51.93 -0.41 -0.59 16 40 H 0.07 0.08 8.14 -51.93 -0.42 -0.35 16 41 H 0.39 0.12 9.06 45.56 0.41 0.53 16 42 H 0.07 -0.07 7.83 -51.93 -0.41 -0.47 16 43 H 0.38 -1.34 8.74 45.56 0.40 -0.94 16 44 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 45 H -0.25 -0.37 6.75 56.52 0.38 0.01 16 46 H 0.13 0.17 4.87 -52.49 -0.26 -0.08 16 LS Contribution 384.33 15.07 5.79 5.79 Total: 0.00 -11.93 384.33 -10.38 -22.31 By element: Atomic # 1 Polarization: -5.02 SS G_CDS: -5.51 Total: -10.53 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: -4.26 Total: -2.20 kcal Atomic # 7 Polarization: -1.72 SS G_CDS: -0.13 Total: -1.86 kcal Atomic # 8 Polarization: -6.48 SS G_CDS: -1.14 Total: -7.62 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.13 Total: -5.90 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -11.93 -10.38 -22.31 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.309 kcal (2) G-P(sol) polarization free energy of solvation -11.929 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.380 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.384 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.313 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.995 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds