Wall clock time and date at job start Sun Mar 7 2021 04:35:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 C 1.46897 * 111.00226 * 2 1 4 4 C 1.39048 * 111.00094 * 123.95801 * 2 1 3 5 5 C 1.39202 * 119.93235 * 119.99841 * 4 2 1 6 6 C 1.50701 * 119.96449 * 0.04620 * 5 4 2 7 7 O 1.42904 * 109.47044 * 284.97396 * 6 5 4 8 8 Si 1.86294 * 109.47004 * 164.97882 * 6 5 4 9 9 C 1.37628 * 120.07052 * 180.02562 * 5 4 2 10 10 C 1.39781 * 119.92971 * 0.02562 * 9 5 4 11 11 C 1.47514 * 120.06886 * 179.97438 * 10 9 5 12 12 O 1.21587 * 120.00209 * 359.97438 * 11 10 9 13 13 N 1.34776 * 119.99937 * 179.97438 * 11 10 9 14 14 C 1.46508 * 120.00098 * 179.97438 * 13 11 10 15 15 H 1.09000 * 112.84745 * 336.19733 * 14 13 11 16 16 C 1.53781 * 113.68939 * 107.46253 * 14 13 11 17 17 C 1.53776 * 87.08175 * 89.12540 * 16 14 13 18 18 H 1.09000 * 113.69626 * 270.87394 * 17 16 14 19 19 C 1.53006 * 113.61198 * 139.97780 * 17 16 14 20 20 N 1.46498 * 109.47010 * 87.51033 * 19 17 16 21 21 C 1.34941 * 126.03980 * 125.00325 * 20 19 17 22 22 C 1.35325 * 107.74555 * 180.02562 * 21 20 19 23 23 C 1.39868 * 107.91737 * 0.26206 * 22 21 20 24 24 N 1.30842 * 108.20327 * 359.55203 * 23 22 21 25 25 C 1.53781 * 113.61475 * 204.99758 * 14 13 11 26 26 C 1.39820 * 119.85835 * 0.24514 * 10 9 5 27 27 C 1.37586 * 119.93188 * 359.49812 * 26 10 9 28 28 H 1.08997 * 109.47423 * 296.04175 * 1 2 3 29 29 H 1.09007 * 109.47422 * 56.04514 * 1 2 3 30 30 H 1.09004 * 109.47264 * 176.03905 * 1 2 3 31 31 H 1.08991 * 109.47689 * 183.95157 * 3 2 1 32 32 H 1.09004 * 109.47211 * 303.95669 * 3 2 1 33 33 H 1.09008 * 109.46934 * 63.95201 * 3 2 1 34 34 H 1.08993 * 109.47344 * 44.97815 * 6 5 4 35 35 H 0.96708 * 113.99602 * 60.00153 * 7 6 5 36 36 H 1.48499 * 109.99923 * 178.68178 * 8 6 5 37 37 H 1.48504 * 110.00010 * 299.99799 * 8 6 5 38 38 H 1.07993 * 120.03700 * 180.02562 * 9 5 4 39 39 H 0.97003 * 120.00447 * 359.97438 * 13 11 10 40 40 H 1.09003 * 113.61303 * 334.57918 * 16 14 13 41 41 H 1.09002 * 113.61367 * 203.67582 * 16 14 13 42 42 H 1.08992 * 109.47371 * 327.50222 * 19 17 16 43 43 H 1.09010 * 109.46873 * 207.50310 * 19 17 16 44 44 H 1.07997 * 126.13283 * 0.03046 * 21 20 19 45 45 H 1.08002 * 126.03725 * 179.97438 * 22 21 20 46 46 H 1.08007 * 125.89524 * 179.73435 * 23 22 21 47 47 H 1.08991 * 113.61285 * 156.25004 * 25 14 13 48 48 H 1.09000 * 113.61189 * 25.34517 * 25 14 13 49 49 H 1.08001 * 120.02789 * 179.74931 * 26 10 9 50 50 H 1.07997 * 119.96496 * 180.25059 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.9673 -0.7251 1.0767 5 6 2.7793 -1.8331 0.8517 6 6 3.1178 -2.2444 -0.5580 7 8 1.9831 -2.8746 -1.1559 8 14 4.5479 -3.4379 -0.5302 9 6 3.2736 -2.5532 1.9153 10 6 2.9591 -2.1712 3.2226 11 6 3.4868 -2.9411 4.3649 12 8 4.1958 -3.9094 4.1698 13 7 3.1831 -2.5712 5.6248 14 6 3.7067 -3.3361 6.7593 15 1 3.9589 -4.3635 6.4967 16 6 4.8172 -2.6084 7.5353 17 6 3.7027 -1.9920 8.3970 18 1 3.3119 -1.0541 8.0024 19 6 4.0519 -1.9112 9.8845 20 7 4.7590 -0.6566 10.1526 21 6 4.4068 0.2742 11.0639 22 6 5.3130 1.2773 11.0004 23 6 6.2477 0.9508 10.0124 24 7 5.9201 -0.2110 9.5077 25 6 2.8493 -3.2178 8.0303 26 6 2.1386 -1.0611 3.4451 27 6 1.6519 -0.3422 2.3777 28 1 -0.3634 0.4511 0.9233 29 1 -0.3634 0.5740 -0.8525 30 1 -0.3634 -1.0252 -0.0710 31 1 3.0827 1.3432 -0.0708 32 1 1.5898 1.9163 -0.8524 33 1 1.7043 1.8723 0.9234 34 1 3.3914 -1.3630 -1.1379 35 1 1.1994 -2.3099 -1.2037 36 1 4.8710 -3.8757 -1.9120 37 1 5.7344 -2.7946 0.0892 38 1 3.9039 -3.4125 1.7401 39 1 2.6178 -1.7984 5.7805 40 1 5.3611 -1.8775 6.9368 41 1 5.4756 -3.2792 8.0873 42 1 4.6898 -2.7528 10.1542 43 1 3.1362 -1.9455 10.4750 44 1 3.5545 0.2272 11.7255 45 1 5.3118 2.1737 11.6027 46 1 7.0953 1.5525 9.7190 47 1 2.9697 -4.0550 8.7177 48 1 1.8046 -2.9787 7.8316 49 1 1.8905 -0.7659 4.4539 50 1 1.0214 0.5177 2.5490 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:35:46 Heat of formation + Delta-G solvation = 87.334243 kcal Electronic energy + Delta-G solvation = -31479.712913 eV Core-core repulsion = 27283.738568 eV Total energy + Delta-G solvation = -4195.974345 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.184 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.11449 -41.77689 -40.95767 -39.45492 -37.67682 -37.24374 -35.14723 -33.66351 -32.63233 -31.34664 -30.92423 -28.79524 -28.64348 -26.93467 -26.82905 -26.25494 -24.33905 -23.35514 -22.94467 -21.94270 -21.62097 -21.31151 -20.39589 -19.13816 -18.24845 -17.96711 -17.81612 -17.38804 -16.75653 -16.55701 -16.38491 -16.02705 -16.01589 -15.69408 -15.45240 -15.31386 -15.11724 -14.96431 -14.78643 -14.65532 -14.40908 -14.07663 -13.93902 -13.81133 -13.67689 -13.61350 -13.49748 -13.18028 -13.11121 -12.89480 -12.86718 -12.73102 -12.32277 -11.90364 -11.72333 -11.57186 -11.34315 -11.30022 -11.13121 -10.90316 -10.31415 -10.15998 -10.10842 -9.84445 -9.76228 -9.49067 -4.73410 -0.41466 0.12016 1.00299 1.50046 1.57276 1.67901 1.79977 1.98159 1.98606 2.10248 2.59019 2.63465 3.19147 3.32012 3.47245 3.52723 3.56696 3.65231 3.71089 3.87474 3.91442 3.94370 3.96353 4.04688 4.05411 4.12851 4.15509 4.23106 4.30130 4.33123 4.34473 4.39418 4.52530 4.56639 4.60937 4.64898 4.70828 4.72493 4.73816 4.77242 4.85978 4.92215 4.97214 5.02272 5.06965 5.09959 5.13387 5.18194 5.45750 5.52782 5.57007 5.76421 6.09168 6.09248 6.38842 6.68119 6.82103 7.14827 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 N -0.518 5.518 3 C 0.026 3.974 4 C 0.125 3.875 5 C -0.099 4.099 6 C -0.062 4.062 7 O -0.533 6.533 8 Si 0.730 3.270 9 C -0.042 4.042 10 C -0.133 4.133 11 C 0.563 3.437 12 O -0.526 6.526 13 N -0.709 5.709 14 C 0.119 3.881 15 H 0.109 0.891 16 C -0.134 4.134 17 C -0.122 4.122 18 H 0.093 0.907 19 C 0.141 3.859 20 N -0.372 5.372 21 C 0.049 3.951 22 C -0.275 4.275 23 C 0.041 3.959 24 N -0.289 5.289 25 C -0.137 4.137 26 C -0.072 4.072 27 C -0.153 4.153 28 H 0.035 0.965 29 H 0.079 0.921 30 H 0.075 0.925 31 H 0.072 0.928 32 H 0.079 0.921 33 H 0.035 0.965 34 H 0.080 0.920 35 H 0.365 0.635 36 H -0.252 1.252 37 H -0.250 1.250 38 H 0.147 0.853 39 H 0.399 0.601 40 H 0.076 0.924 41 H 0.094 0.906 42 H 0.088 0.912 43 H 0.097 0.903 44 H 0.172 0.828 45 H 0.146 0.854 46 H 0.182 0.818 47 H 0.102 0.898 48 H 0.078 0.922 49 H 0.127 0.873 50 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.623 3.446 4.269 7.856 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 N -0.239 5.239 3 C -0.120 4.120 4 C 0.030 3.970 5 C -0.100 4.100 6 C -0.171 4.171 7 O -0.338 6.338 8 Si 0.629 3.371 9 C -0.061 4.061 10 C -0.136 4.136 11 C 0.351 3.649 12 O -0.402 6.402 13 N -0.361 5.361 14 C 0.013 3.987 15 H 0.127 0.873 16 C -0.172 4.172 17 C -0.141 4.141 18 H 0.111 0.889 19 C 0.020 3.980 20 N -0.154 5.154 21 C -0.097 4.097 22 C -0.304 4.304 23 C -0.145 4.145 24 N -0.110 5.110 25 C -0.176 4.176 26 C -0.091 4.091 27 C -0.173 4.173 28 H 0.054 0.946 29 H 0.098 0.902 30 H 0.093 0.907 31 H 0.090 0.910 32 H 0.097 0.903 33 H 0.054 0.946 34 H 0.098 0.902 35 H 0.213 0.787 36 H -0.177 1.177 37 H -0.175 1.175 38 H 0.164 0.836 39 H 0.235 0.765 40 H 0.095 0.905 41 H 0.112 0.888 42 H 0.106 0.894 43 H 0.116 0.884 44 H 0.189 0.811 45 H 0.164 0.836 46 H 0.199 0.801 47 H 0.120 0.880 48 H 0.097 0.903 49 H 0.145 0.855 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -3.512 0.833 2.492 4.387 hybrid contribution -1.630 3.355 1.326 3.959 sum -5.142 4.188 3.818 7.652 Atomic orbital electron populations 1.22552 0.84975 1.03220 1.01622 1.59462 1.09056 1.14809 1.40538 1.22495 1.01239 0.86820 1.01494 1.18839 0.95527 0.93623 0.88978 1.20259 0.98293 0.94868 0.96571 1.25277 0.97898 1.04448 0.89469 1.86734 1.22175 1.42735 1.82182 0.92896 0.73754 0.86825 0.83671 1.21038 0.96705 0.97878 0.90474 1.19873 1.02048 0.98008 0.93645 1.18122 0.80154 0.83970 0.82668 1.90819 1.36977 1.27264 1.85177 1.45552 1.52874 1.32601 1.05072 1.21861 0.94905 0.97068 0.84830 0.87272 1.23405 0.96198 0.99856 0.97757 1.22906 0.98473 0.98814 0.93922 0.88857 1.21797 0.96031 0.83153 0.96986 1.48750 1.20855 1.16967 1.28862 1.22603 1.01007 0.90624 0.95430 1.21559 0.99429 1.02942 1.06497 1.23952 1.00219 0.94249 0.96107 1.77408 0.99636 1.13824 1.20146 1.23361 0.99076 0.98194 0.96982 1.21133 0.95235 0.93653 0.99079 1.21570 1.01937 1.01033 0.92800 0.94596 0.90207 0.90654 0.90952 0.90262 0.94630 0.90233 0.78692 1.17675 1.17480 0.83596 0.76535 0.90528 0.88787 0.89390 0.88433 0.81080 0.83594 0.80148 0.87990 0.90318 0.85500 0.85287 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.20 60.06 0.55 0.50 16 2 N -0.52 0.37 3.67 -186.86 -0.69 -0.31 16 3 C 0.03 -0.04 9.38 60.06 0.56 0.52 16 4 C 0.12 0.04 4.66 -83.86 -0.39 -0.35 16 5 C -0.10 -0.15 5.28 -104.49 -0.55 -0.70 16 6 C -0.06 -0.11 2.29 36.01 0.08 -0.03 16 7 O -0.53 -1.25 12.65 -35.23 -0.45 -1.70 16 8 Si 0.73 1.43 30.17 -169.99 -5.13 -3.70 16 9 C -0.04 -0.09 8.19 -39.23 -0.32 -0.41 16 10 C -0.13 -0.17 5.88 -104.95 -0.62 -0.79 16 11 C 0.56 1.33 7.76 -12.48 -0.10 1.24 16 12 O -0.53 -3.06 15.94 5.29 0.08 -2.98 16 13 N -0.71 0.40 5.22 -54.06 -0.28 0.12 16 14 C 0.12 -0.10 4.32 -67.11 -0.29 -0.39 16 15 H 0.11 0.07 7.46 -51.93 -0.39 -0.31 16 16 C -0.13 0.06 7.43 -25.92 -0.19 -0.13 16 17 C -0.12 0.29 3.71 -89.80 -0.33 -0.05 16 18 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 19 C 0.14 -0.32 6.35 -4.04 -0.03 -0.35 16 20 N -0.37 -0.27 3.68 -61.36 -0.23 -0.50 16 21 C 0.05 -0.01 11.45 -17.22 -0.20 -0.21 16 22 C -0.27 -0.19 10.80 -40.01 -0.43 -0.62 16 23 C 0.04 0.07 12.03 -17.36 -0.21 -0.14 16 24 N -0.29 -0.90 12.42 30.63 0.38 -0.52 16 25 C -0.14 0.48 7.39 -25.92 -0.19 0.29 16 26 C -0.07 0.07 9.53 -39.23 -0.37 -0.31 16 27 C -0.15 0.12 8.53 -39.45 -0.34 -0.22 16 28 H 0.04 -0.09 7.09 -51.93 -0.37 -0.46 16 29 H 0.08 -0.24 8.12 -51.92 -0.42 -0.67 16 30 H 0.07 -0.17 7.84 -51.93 -0.41 -0.58 16 31 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.08 -0.19 8.12 -51.93 -0.42 -0.62 16 33 H 0.04 -0.07 7.32 -51.92 -0.38 -0.45 16 34 H 0.08 0.14 7.77 -51.93 -0.40 -0.26 16 35 H 0.37 0.12 8.06 45.56 0.37 0.49 16 36 H -0.25 -1.09 7.11 56.52 0.40 -0.69 16 37 H -0.25 -0.89 7.11 56.52 0.40 -0.49 16 38 H 0.15 0.28 4.70 -52.49 -0.25 0.04 16 39 H 0.40 -1.16 6.72 -40.82 -0.27 -1.43 16 40 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 41 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 42 H 0.09 -0.21 7.84 -51.93 -0.41 -0.62 16 43 H 0.10 -0.45 8.07 -51.92 -0.42 -0.87 16 44 H 0.17 -0.59 8.06 -52.49 -0.42 -1.02 16 45 H 0.15 -0.15 8.06 -52.49 -0.42 -0.58 16 46 H 0.18 -0.11 8.06 -52.48 -0.42 -0.54 16 47 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 48 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 49 H 0.13 -0.46 6.39 -52.49 -0.34 -0.79 16 50 H 0.13 -0.30 6.99 -52.49 -0.37 -0.66 16 LS Contribution 407.36 15.07 6.14 6.14 Total: 0.00 -8.53 407.36 -10.98 -19.51 By element: Atomic # 1 Polarization: -6.48 SS G_CDS: -7.46 Total: -13.94 kcal Atomic # 6 Polarization: 1.23 SS G_CDS: -3.36 Total: -2.13 kcal Atomic # 7 Polarization: -0.39 SS G_CDS: -0.81 Total: -1.20 kcal Atomic # 8 Polarization: -4.31 SS G_CDS: -0.36 Total: -4.68 kcal Atomic # 14 Polarization: 1.43 SS G_CDS: -5.13 Total: -3.70 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -8.53 -10.98 -19.51 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.849 kcal (2) G-P(sol) polarization free energy of solvation -8.532 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 98.317 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.983 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.515 kcal (6) G-S(sol) free energy of system = (1) + (5) 87.334 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds