Wall clock time and date at job start Sun Mar 7 2021 04:35:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 C 1.46897 * 111.00226 * 2 1 4 4 C 1.39048 * 111.00094 * 123.95801 * 2 1 3 5 5 C 1.39202 * 119.93235 * 119.99841 * 4 2 1 6 6 C 1.50701 * 119.96449 * 0.04620 * 5 4 2 7 7 O 1.42904 * 109.47044 * 284.97396 * 6 5 4 8 8 Si 1.86294 * 109.47004 * 164.97882 * 6 5 4 9 9 C 1.37628 * 120.07052 * 180.02562 * 5 4 2 10 10 C 1.39781 * 119.92971 * 0.02562 * 9 5 4 11 11 C 1.47514 * 120.06886 * 179.97438 * 10 9 5 12 12 O 1.21587 * 120.00209 * 359.97438 * 11 10 9 13 13 N 1.34776 * 119.99937 * 179.97438 * 11 10 9 14 14 C 1.46508 * 120.00098 * 179.97438 * 13 11 10 15 15 H 1.09000 * 112.84745 * 336.19733 * 14 13 11 16 16 C 1.53781 * 113.68939 * 107.46253 * 14 13 11 17 17 C 1.53776 * 87.08175 * 89.12540 * 16 14 13 18 18 H 1.09000 * 113.69626 * 270.87394 * 17 16 14 19 19 C 1.53006 * 113.61198 * 139.97780 * 17 16 14 20 20 N 1.46498 * 109.47010 * 87.51033 * 19 17 16 21 21 C 1.34941 * 126.03980 * 125.00325 * 20 19 17 22 22 C 1.35325 * 107.74555 * 180.02562 * 21 20 19 23 23 C 1.39868 * 107.91737 * 0.26206 * 22 21 20 24 24 N 1.30842 * 108.20327 * 359.55203 * 23 22 21 25 25 C 1.53781 * 113.61475 * 204.99758 * 14 13 11 26 26 C 1.39820 * 119.85835 * 0.24514 * 10 9 5 27 27 C 1.37586 * 119.93188 * 359.49812 * 26 10 9 28 28 H 1.08997 * 109.47423 * 296.04175 * 1 2 3 29 29 H 1.09007 * 109.47422 * 56.04514 * 1 2 3 30 30 H 1.09004 * 109.47264 * 176.03905 * 1 2 3 31 31 H 1.08991 * 109.47689 * 183.95157 * 3 2 1 32 32 H 1.09004 * 109.47211 * 303.95669 * 3 2 1 33 33 H 1.09008 * 109.46934 * 63.95201 * 3 2 1 34 34 H 1.08993 * 109.47344 * 44.97815 * 6 5 4 35 35 H 0.96708 * 113.99602 * 60.00153 * 7 6 5 36 36 H 1.48499 * 109.99923 * 178.68178 * 8 6 5 37 37 H 1.48504 * 110.00010 * 299.99799 * 8 6 5 38 38 H 1.07993 * 120.03700 * 180.02562 * 9 5 4 39 39 H 0.97003 * 120.00447 * 359.97438 * 13 11 10 40 40 H 1.09003 * 113.61303 * 334.57918 * 16 14 13 41 41 H 1.09002 * 113.61367 * 203.67582 * 16 14 13 42 42 H 1.08992 * 109.47371 * 327.50222 * 19 17 16 43 43 H 1.09010 * 109.46873 * 207.50310 * 19 17 16 44 44 H 1.07997 * 126.13283 * 0.03046 * 21 20 19 45 45 H 1.08002 * 126.03725 * 179.97438 * 22 21 20 46 46 H 1.08007 * 125.89524 * 179.73435 * 23 22 21 47 47 H 1.08991 * 113.61285 * 156.25004 * 25 14 13 48 48 H 1.09000 * 113.61189 * 25.34517 * 25 14 13 49 49 H 1.08001 * 120.02789 * 179.74931 * 26 10 9 50 50 H 1.07997 * 119.96496 * 180.25059 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.9673 -0.7251 1.0767 5 6 2.7793 -1.8331 0.8517 6 6 3.1178 -2.2444 -0.5580 7 8 1.9831 -2.8746 -1.1559 8 14 4.5479 -3.4379 -0.5302 9 6 3.2736 -2.5532 1.9153 10 6 2.9591 -2.1712 3.2226 11 6 3.4868 -2.9411 4.3649 12 8 4.1958 -3.9094 4.1698 13 7 3.1831 -2.5712 5.6248 14 6 3.7067 -3.3361 6.7593 15 1 3.9589 -4.3635 6.4967 16 6 4.8172 -2.6084 7.5353 17 6 3.7027 -1.9920 8.3970 18 1 3.3119 -1.0541 8.0024 19 6 4.0519 -1.9112 9.8845 20 7 4.7590 -0.6566 10.1526 21 6 4.4068 0.2742 11.0639 22 6 5.3130 1.2773 11.0004 23 6 6.2477 0.9508 10.0124 24 7 5.9201 -0.2110 9.5077 25 6 2.8493 -3.2178 8.0303 26 6 2.1386 -1.0611 3.4451 27 6 1.6519 -0.3422 2.3777 28 1 -0.3634 0.4511 0.9233 29 1 -0.3634 0.5740 -0.8525 30 1 -0.3634 -1.0252 -0.0710 31 1 3.0827 1.3432 -0.0708 32 1 1.5898 1.9163 -0.8524 33 1 1.7043 1.8723 0.9234 34 1 3.3914 -1.3630 -1.1379 35 1 1.1994 -2.3099 -1.2037 36 1 4.8710 -3.8757 -1.9120 37 1 5.7344 -2.7946 0.0892 38 1 3.9039 -3.4125 1.7401 39 1 2.6178 -1.7984 5.7805 40 1 5.3611 -1.8775 6.9368 41 1 5.4756 -3.2792 8.0873 42 1 4.6898 -2.7528 10.1542 43 1 3.1362 -1.9455 10.4750 44 1 3.5545 0.2272 11.7255 45 1 5.3118 2.1737 11.6027 46 1 7.0953 1.5525 9.7190 47 1 2.9697 -4.0550 8.7177 48 1 1.8046 -2.9787 7.8316 49 1 1.8905 -0.7659 4.4539 50 1 1.0214 0.5177 2.5490 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688104_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:35:45 Heat of formation + Delta-G solvation = 88.957553 kcal Electronic energy + Delta-G solvation = -31479.642521 eV Core-core repulsion = 27283.738568 eV Total energy + Delta-G solvation = -4195.903953 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.184 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -42.09046 -41.80223 -40.94316 -39.48390 -37.72337 -37.32338 -35.17934 -33.66155 -32.66564 -31.33850 -30.90925 -28.61821 -28.57079 -26.96723 -26.70507 -26.25557 -24.26521 -23.36642 -22.94381 -21.90352 -21.60524 -21.33498 -20.34821 -19.19486 -18.19452 -18.01699 -17.82452 -17.40529 -16.72732 -16.53091 -16.33910 -16.13759 -15.97040 -15.69425 -15.47059 -15.27834 -15.19075 -14.89667 -14.76235 -14.65158 -14.35855 -14.21723 -13.96967 -13.72741 -13.61028 -13.48708 -13.39191 -13.13937 -13.02950 -12.79656 -12.75382 -12.66015 -12.23402 -12.19375 -11.66309 -11.57459 -11.43915 -11.31886 -11.22561 -11.07103 -10.33016 -10.22613 -10.13490 -9.83090 -9.65272 -9.47247 -4.95169 -0.45384 0.10623 1.02819 1.30304 1.51318 1.61628 1.69702 1.83188 1.96430 1.96591 2.57735 2.69469 3.34923 3.44736 3.48704 3.55591 3.67010 3.68914 3.80566 3.87750 3.98152 4.03303 4.07958 4.10233 4.15402 4.23883 4.32454 4.36494 4.36598 4.40382 4.49176 4.55723 4.61915 4.65801 4.71434 4.75731 4.79953 4.84191 4.90540 4.93129 4.95860 4.98789 5.02090 5.05733 5.08914 5.14404 5.16833 5.17338 5.46866 5.55061 5.73567 5.76625 6.16225 6.21411 6.38475 6.62306 6.81047 7.06867 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 N -0.528 5.528 3 C 0.025 3.975 4 C 0.127 3.873 5 C -0.112 4.112 6 C -0.056 4.056 7 O -0.543 6.543 8 Si 0.772 3.228 9 C -0.059 4.059 10 C -0.147 4.147 11 C 0.559 3.441 12 O -0.572 6.572 13 N -0.694 5.694 14 C 0.109 3.891 15 H 0.090 0.910 16 C -0.137 4.137 17 C -0.109 4.109 18 H 0.090 0.910 19 C 0.134 3.866 20 N -0.375 5.375 21 C 0.053 3.947 22 C -0.294 4.294 23 C 0.024 3.976 24 N -0.331 5.331 25 C -0.115 4.115 26 C -0.059 4.059 27 C -0.151 4.151 28 H 0.043 0.957 29 H 0.088 0.912 30 H 0.074 0.926 31 H 0.061 0.939 32 H 0.088 0.912 33 H 0.044 0.956 34 H 0.080 0.920 35 H 0.374 0.626 36 H -0.284 1.284 37 H -0.277 1.277 38 H 0.137 0.863 39 H 0.413 0.587 40 H 0.047 0.953 41 H 0.090 0.910 42 H 0.088 0.912 43 H 0.131 0.869 44 H 0.207 0.793 45 H 0.159 0.841 46 H 0.191 0.809 47 H 0.118 0.882 48 H 0.096 0.904 49 H 0.158 0.842 50 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.342 4.726 6.042 11.333 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.249 5.249 3 C -0.121 4.121 4 C 0.032 3.968 5 C -0.114 4.114 6 C -0.166 4.166 7 O -0.350 6.350 8 Si 0.675 3.325 9 C -0.078 4.078 10 C -0.150 4.150 11 C 0.348 3.652 12 O -0.452 6.452 13 N -0.346 5.346 14 C 0.004 3.996 15 H 0.108 0.892 16 C -0.176 4.176 17 C -0.128 4.128 18 H 0.108 0.892 19 C 0.014 3.986 20 N -0.158 5.158 21 C -0.093 4.093 22 C -0.323 4.323 23 C -0.161 4.161 24 N -0.153 5.153 25 C -0.153 4.153 26 C -0.078 4.078 27 C -0.171 4.171 28 H 0.062 0.938 29 H 0.107 0.893 30 H 0.092 0.908 31 H 0.080 0.920 32 H 0.107 0.893 33 H 0.062 0.938 34 H 0.098 0.902 35 H 0.224 0.776 36 H -0.211 1.211 37 H -0.203 1.203 38 H 0.154 0.846 39 H 0.251 0.749 40 H 0.066 0.934 41 H 0.108 0.892 42 H 0.106 0.894 43 H 0.149 0.851 44 H 0.224 0.776 45 H 0.176 0.824 46 H 0.208 0.792 47 H 0.136 0.864 48 H 0.114 0.886 49 H 0.175 0.825 50 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -6.262 2.137 4.292 7.886 hybrid contribution -0.756 2.985 0.775 3.175 sum -7.018 5.122 5.067 10.058 Atomic orbital electron populations 1.22599 0.83837 1.03462 1.02438 1.59453 1.10046 1.15176 1.40244 1.22518 1.00655 0.86492 1.02394 1.18962 0.94777 0.93070 0.89970 1.20200 0.99411 0.95860 0.95893 1.25122 0.97577 1.03886 0.90036 1.86694 1.22661 1.43356 1.82283 0.92252 0.73011 0.86304 0.80922 1.21076 0.97260 0.98106 0.91332 1.19872 1.03205 0.99052 0.92849 1.18382 0.79620 0.83510 0.83714 1.90791 1.39206 1.29342 1.85870 1.45451 1.52154 1.32685 1.04303 1.21950 0.96030 0.95959 0.85681 0.89218 1.23380 0.96627 0.99425 0.98179 1.22773 0.97352 0.99000 0.93711 0.89211 1.22081 0.97136 0.82148 0.97256 1.49002 1.20287 1.17779 1.28700 1.23190 1.01410 0.89733 0.94978 1.21853 0.99668 1.04031 1.06739 1.24298 1.00983 0.94286 0.96559 1.77346 1.01399 1.14766 1.21797 1.23289 0.99221 0.97939 0.94869 1.21421 0.93573 0.92170 1.00676 1.21815 1.01746 1.01443 0.92126 0.93801 0.89319 0.90758 0.92018 0.89296 0.93760 0.90237 0.77629 1.21116 1.20272 0.84574 0.74934 0.93444 0.89170 0.89409 0.85066 0.77633 0.82354 0.79213 0.86350 0.88582 0.82486 0.83034 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.13 9.20 127.69 1.18 1.04 16 2 N -0.53 1.15 3.67 -745.11 -2.73 -1.58 16 3 C 0.03 -0.10 9.38 127.69 1.20 1.10 16 4 C 0.13 0.04 4.66 38.47 0.18 0.22 16 5 C -0.11 -0.45 5.28 -19.78 -0.10 -0.55 16 6 C -0.06 -0.28 2.29 71.24 0.16 -0.12 16 7 O -0.54 -2.98 12.65 -148.98 -1.89 -4.86 16 8 Si 0.77 4.97 30.17 68.60 2.07 7.04 16 9 C -0.06 -0.34 8.19 22.50 0.18 -0.15 16 10 C -0.15 -0.49 5.88 -20.08 -0.12 -0.61 16 11 C 0.56 3.45 7.76 86.69 0.67 4.12 16 12 O -0.57 -8.28 15.94 -3.99 -0.06 -8.34 16 13 N -0.69 0.61 5.22 -443.21 -2.31 -1.70 16 14 C 0.11 -0.13 4.32 45.52 0.20 0.07 16 15 H 0.09 0.28 7.46 -2.39 -0.02 0.26 16 16 C -0.14 -0.04 7.43 31.12 0.23 0.20 16 17 C -0.11 0.61 3.71 -10.27 -0.04 0.58 16 18 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 19 C 0.13 -0.81 6.35 86.38 0.55 -0.27 16 20 N -0.38 -0.28 3.68 -348.05 -1.28 -1.56 16 21 C 0.05 -0.10 11.45 83.54 0.96 0.86 16 22 C -0.29 -0.29 10.80 21.99 0.24 -0.05 16 23 C 0.02 0.11 12.03 85.23 1.02 1.13 16 24 N -0.33 -2.34 12.42 -57.02 -0.71 -3.05 16 25 C -0.11 1.00 7.39 31.12 0.23 1.23 16 26 C -0.06 0.18 9.53 22.50 0.21 0.39 16 27 C -0.15 0.47 8.53 22.36 0.19 0.66 16 28 H 0.04 -0.32 7.09 -2.39 -0.02 -0.34 16 29 H 0.09 -0.67 8.12 -2.38 -0.02 -0.69 16 30 H 0.07 -0.42 7.84 -2.39 -0.02 -0.43 16 31 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 32 H 0.09 -0.53 8.12 -2.38 -0.02 -0.55 16 33 H 0.04 -0.25 7.32 -2.38 -0.02 -0.27 16 34 H 0.08 0.38 7.77 -2.39 -0.02 0.36 16 35 H 0.37 0.34 8.06 -74.05 -0.60 -0.26 16 36 H -0.28 -3.28 7.11 99.48 0.71 -2.57 16 37 H -0.28 -2.87 7.11 99.48 0.71 -2.17 16 38 H 0.14 0.93 4.70 -2.91 -0.01 0.92 16 39 H 0.41 -2.86 6.72 -92.71 -0.62 -3.48 16 40 H 0.05 0.29 8.14 -2.39 -0.02 0.28 16 41 H 0.09 0.06 7.90 -2.39 -0.02 0.04 16 42 H 0.09 -0.51 7.84 -2.39 -0.02 -0.53 16 43 H 0.13 -1.67 8.07 -2.38 -0.02 -1.69 16 44 H 0.21 -2.07 8.06 -2.91 -0.02 -2.09 16 45 H 0.16 -0.42 8.06 -2.91 -0.02 -0.45 16 46 H 0.19 0.03 8.06 -2.91 -0.02 0.01 16 47 H 0.12 -1.35 8.10 -2.39 -0.02 -1.37 16 48 H 0.10 -1.08 8.14 -2.39 -0.02 -1.10 16 49 H 0.16 -1.53 6.39 -2.91 -0.02 -1.55 16 50 H 0.15 -1.14 6.99 -2.91 -0.02 -1.16 16 Total: 0.00 -23.61 407.36 0.02 -23.59 By element: Atomic # 1 Polarization: -19.17 SS G_CDS: -0.21 Total: -19.38 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: 7.14 Total: 9.84 kcal Atomic # 7 Polarization: -0.85 SS G_CDS: -7.03 Total: -7.88 kcal Atomic # 8 Polarization: -11.25 SS G_CDS: -1.95 Total: -13.20 kcal Atomic # 14 Polarization: 4.97 SS G_CDS: 2.07 Total: 7.04 kcal Total: -23.61 0.02 -23.59 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 112.552 kcal (2) G-P(sol) polarization free energy of solvation -23.613 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 88.939 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.019 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.594 kcal (6) G-S(sol) free energy of system = (1) + (5) 88.958 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds