Wall clock time and date at job start Sun Mar 7 2021 04:36:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37873 * 126.45642 * 2 1 4 4 C 1.46680 * 126.23230 * 0.05288 * 3 2 1 5 5 O 1.21687 * 120.00116 * 0.02562 * 4 3 2 6 6 N 1.34781 * 119.99542 * 179.97438 * 4 3 2 7 7 C 1.46500 * 119.99659 * 180.02562 * 6 4 3 8 8 H 1.09000 * 112.85127 * 23.80820 * 7 6 4 9 9 C 1.53783 * 113.61175 * 154.99982 * 7 6 4 10 10 C 1.53780 * 87.07956 * 89.11895 * 9 7 6 11 11 H 1.09001 * 113.61383 * 270.88015 * 10 9 7 12 12 C 1.53003 * 113.61518 * 140.06362 * 10 9 7 13 13 N 1.46500 * 109.47198 * 174.99779 * 12 10 9 14 14 C 1.34947 * 126.03824 * 124.71517 * 13 12 10 15 15 C 1.35313 * 107.74619 * 179.84179 * 14 13 12 16 16 C 1.39865 * 107.92026 * 0.42293 * 15 14 13 17 17 N 1.30836 * 108.20451 * 359.74045 * 16 15 14 18 18 C 1.53779 * 113.61764 * 252.49929 * 7 6 4 19 19 N 1.37654 * 107.53347 * 179.76131 * 3 2 1 20 20 C 1.35539 * 108.64059 * 0.42448 * 19 3 2 21 21 C 1.50696 * 125.56125 * 179.83699 * 20 19 3 22 22 O 1.42903 * 109.47131 * 299.71153 * 21 20 19 23 23 Si 1.86305 * 109.47185 * 179.71693 * 21 20 19 24 24 C 1.35451 * 108.87061 * 359.56736 * 20 19 3 25 25 H 1.08991 * 109.47126 * 270.00076 * 1 2 3 26 26 H 1.09003 * 109.46862 * 30.00260 * 1 2 3 27 27 H 1.09003 * 109.46857 * 149.99610 * 1 2 3 28 28 H 0.96998 * 120.00434 * 0.02562 * 6 4 3 29 29 H 1.09000 * 113.61532 * 203.66429 * 9 7 6 30 30 H 1.08997 * 113.61880 * 334.56880 * 9 7 6 31 31 H 1.09003 * 109.46981 * 294.99858 * 12 10 9 32 32 H 1.09000 * 109.46760 * 54.99958 * 12 10 9 33 33 H 1.08002 * 126.12491 * 0.02562 * 14 13 12 34 34 H 1.07998 * 126.03989 * 180.16380 * 15 14 13 35 35 H 1.08004 * 125.90078 * 179.75780 * 16 15 14 36 36 H 1.09009 * 113.61195 * 25.42824 * 18 7 6 37 37 H 1.08993 * 113.62090 * 156.33540 * 18 7 6 38 38 H 0.96997 * 125.68292 * 180.27456 * 19 3 2 39 39 H 1.08999 * 109.47358 * 59.71513 * 21 20 19 40 40 H 0.96700 * 114.00311 * 300.00591 * 22 21 20 41 41 H 1.48499 * 109.99670 * 58.67633 * 23 21 20 42 42 H 1.48497 * 110.00233 * 179.97438 * 23 21 20 43 43 H 1.07997 * 126.06427 * 180.22470 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8898 2.5093 0.0011 5 8 0.7027 2.7766 0.0026 6 7 2.8037 3.4999 0.0015 7 6 2.3678 4.8986 0.0031 8 1 1.3648 5.0288 0.4094 9 6 3.4041 5.8660 0.5989 10 6 3.9847 5.9931 -0.8194 11 1 4.7510 5.2517 -1.0456 12 6 4.4104 7.4172 -1.1821 13 7 5.0560 7.4140 -2.4972 14 6 4.6971 8.1644 -3.5597 15 6 5.5414 7.8714 -4.5757 16 6 6.4412 6.9018 -4.1214 17 7 6.1512 6.6268 -2.8756 18 6 2.5881 5.6141 -1.3401 19 7 3.6284 0.6625 0.0055 20 6 3.6218 -0.6928 -0.0007 21 6 4.8433 -1.5752 -0.0012 22 8 5.6239 -1.3075 -1.1679 23 14 4.3182 -3.3628 -0.0022 24 6 2.3379 -1.1246 -0.0004 25 1 -0.3633 0.0000 1.0276 26 1 -0.3633 0.8900 -0.5139 27 1 -0.3633 -0.8900 -0.5139 28 1 3.7500 3.2868 0.0007 29 1 2.9704 6.7915 0.9777 30 1 4.0842 5.3947 1.3085 31 1 3.5326 8.0629 -1.2099 32 1 5.1110 7.7885 -0.4343 33 1 3.8837 8.8742 -3.5923 34 1 5.5211 8.3060 -5.5642 35 1 7.2381 6.4571 -4.6991 36 1 2.6096 4.9393 -2.1959 37 1 1.9314 6.4707 -1.4915 38 1 4.4191 1.2243 0.0105 39 1 5.4388 -1.3720 0.8889 40 1 5.1563 -1.4671 -1.9991 41 1 3.4791 -3.6449 -1.1944 42 1 5.5139 -4.2434 -0.0032 43 1 2.0136 -2.1548 -0.0011 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_13940406.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:36:04 Heat of formation + Delta-G solvation = 84.259776 kcal Electronic energy + Delta-G solvation = -26010.896102 eV Core-core repulsion = 22254.089816 eV Total energy + Delta-G solvation = -3756.806285 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.62308 -42.09110 -41.03424 -39.26277 -37.90208 -35.23324 -33.80150 -33.22361 -31.62399 -30.98515 -28.75492 -28.13524 -26.96902 -26.85313 -24.42894 -22.85922 -22.01378 -21.72990 -21.55184 -20.53057 -20.21452 -19.56696 -18.36164 -18.11190 -17.20972 -16.77393 -16.60933 -16.41740 -15.98567 -15.80338 -15.53328 -15.38011 -15.00252 -14.83735 -14.54456 -14.38762 -14.25523 -13.96943 -13.83778 -13.68020 -13.61284 -13.56110 -13.48168 -12.95962 -12.90142 -12.38383 -12.25136 -11.88611 -11.78602 -11.60555 -11.47305 -11.10718 -10.83696 -10.33135 -10.22200 -9.82876 -9.48954 -9.17491 -4.98846 0.34748 0.98630 1.10200 1.53835 1.55406 1.59331 1.81670 1.93812 1.97174 2.14495 2.32930 3.17906 3.20718 3.30151 3.35780 3.50178 3.60914 3.77201 3.83570 3.92784 4.00819 4.14519 4.19996 4.25747 4.31973 4.37213 4.47423 4.48386 4.61603 4.65952 4.73803 4.81372 4.84194 4.86156 4.90021 4.98063 5.02878 5.12737 5.21378 5.36043 5.46308 5.64164 5.74664 5.89860 6.07811 6.19184 6.23919 6.40445 6.79167 7.10891 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.062 4.062 3 C -0.058 4.058 4 C 0.594 3.406 5 O -0.519 6.519 6 N -0.716 5.716 7 C 0.125 3.875 8 H 0.110 0.890 9 C -0.137 4.137 10 C -0.124 4.124 11 H 0.103 0.897 12 C 0.143 3.857 13 N -0.370 5.370 14 C 0.053 3.947 15 C -0.275 4.275 16 C 0.044 3.956 17 N -0.298 5.298 18 C -0.146 4.146 19 N -0.524 5.524 20 C 0.029 3.971 21 C -0.062 4.062 22 O -0.534 6.534 23 Si 0.717 3.283 24 C -0.200 4.200 25 H 0.071 0.929 26 H 0.080 0.920 27 H 0.065 0.935 28 H 0.395 0.605 29 H 0.102 0.898 30 H 0.079 0.921 31 H 0.099 0.901 32 H 0.087 0.913 33 H 0.173 0.827 34 H 0.147 0.853 35 H 0.182 0.818 36 H 0.072 0.928 37 H 0.094 0.906 38 H 0.416 0.584 39 H 0.120 0.880 40 H 0.380 0.620 41 H -0.255 1.255 42 H -0.255 1.255 43 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.141 1.080 1.835 2.133 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.071 4.071 3 C -0.170 4.170 4 C 0.383 3.617 5 O -0.395 6.395 6 N -0.367 5.367 7 C 0.019 3.981 8 H 0.128 0.872 9 C -0.176 4.176 10 C -0.143 4.143 11 H 0.121 0.879 12 C 0.021 3.979 13 N -0.153 5.153 14 C -0.093 4.093 15 C -0.305 4.305 16 C -0.142 4.142 17 N -0.119 5.119 18 C -0.185 4.185 19 N -0.121 5.121 20 C -0.089 4.089 21 C -0.171 4.171 22 O -0.340 6.340 23 Si 0.616 3.384 24 C -0.224 4.224 25 H 0.090 0.910 26 H 0.099 0.901 27 H 0.084 0.916 28 H 0.229 0.771 29 H 0.120 0.880 30 H 0.097 0.903 31 H 0.117 0.883 32 H 0.105 0.895 33 H 0.190 0.810 34 H 0.165 0.835 35 H 0.199 0.801 36 H 0.091 0.909 37 H 0.112 0.888 38 H 0.254 0.746 39 H 0.138 0.862 40 H 0.228 0.772 41 H -0.179 1.179 42 H -0.180 1.180 43 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.082 0.132 3.025 3.029 hybrid contribution 1.019 1.392 -1.907 2.571 sum 1.100 1.525 1.119 2.188 Atomic orbital electron populations 1.20397 0.88804 1.03205 1.02640 1.19941 0.96057 0.90294 1.00783 1.20195 0.83591 0.93402 1.19838 1.17017 0.85802 0.82931 0.75998 1.90838 1.15844 1.83101 1.49695 1.45558 1.09236 1.05609 1.76312 1.21773 0.99715 0.79690 0.96905 0.87167 1.23358 0.98116 1.00227 0.95902 1.22976 0.97802 0.96677 0.96842 0.87917 1.21785 0.97225 0.97960 0.80884 1.48711 1.24547 1.31385 1.10636 1.22599 1.00889 0.97989 0.87859 1.21559 1.01118 1.06406 1.01379 1.23919 1.00060 0.97564 0.92649 1.77309 1.02912 1.16601 1.15112 1.23525 0.95942 1.00980 0.98022 1.41861 1.07124 1.06608 1.56498 1.21055 0.96841 0.83263 1.07773 1.24925 0.91740 1.09170 0.91282 1.86599 1.42009 1.89514 1.15923 0.94270 0.82118 0.72385 0.89616 1.20606 0.90798 0.99143 1.11892 0.91047 0.90094 0.91628 0.77148 0.87964 0.90252 0.88326 0.89496 0.81023 0.83526 0.80098 0.90945 0.88765 0.74628 0.86195 0.77157 1.17873 1.17994 0.83147 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.17 9.83 36.01 0.35 0.19 16 2 C -0.06 -0.14 6.21 -104.16 -0.65 -0.79 16 3 C -0.06 -0.11 7.06 -81.98 -0.58 -0.69 16 4 C 0.59 1.55 7.79 -12.85 -0.10 1.45 16 5 O -0.52 -2.96 14.40 5.20 0.07 -2.88 16 6 N -0.72 0.26 5.26 -54.32 -0.29 -0.02 16 7 C 0.12 -0.12 4.32 -67.12 -0.29 -0.41 16 8 H 0.11 0.04 7.46 -51.93 -0.39 -0.35 16 9 C -0.14 0.43 7.39 -25.92 -0.19 0.24 16 10 C -0.12 0.25 3.74 -89.80 -0.34 -0.09 16 11 H 0.10 -0.03 7.96 -51.93 -0.41 -0.44 16 12 C 0.14 -0.28 6.35 -4.04 -0.03 -0.31 16 13 N -0.37 -0.39 3.68 -61.36 -0.23 -0.62 16 14 C 0.05 0.01 11.45 -17.22 -0.20 -0.18 16 15 C -0.28 -0.29 10.80 -40.02 -0.43 -0.72 16 16 C 0.04 0.09 12.02 -17.37 -0.21 -0.12 16 17 N -0.30 -0.98 12.27 30.62 0.38 -0.61 16 18 C -0.15 0.17 7.43 -25.92 -0.19 -0.02 16 19 N -0.52 0.17 5.99 -5.69 -0.03 0.13 16 20 C 0.03 -0.01 6.47 -81.95 -0.53 -0.54 16 21 C -0.06 0.08 3.08 36.00 0.11 0.19 16 22 O -0.53 -0.01 12.88 -35.23 -0.45 -0.47 16 23 Si 0.72 -1.37 30.54 -169.99 -5.19 -6.56 16 24 C -0.20 -0.10 9.27 -39.98 -0.37 -0.47 16 25 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 26 H 0.08 0.28 6.49 -51.93 -0.34 -0.06 16 27 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 28 H 0.39 -0.92 7.83 -40.82 -0.32 -1.24 16 29 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 30 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 31 H 0.10 -0.41 7.78 -51.93 -0.40 -0.82 16 32 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 33 H 0.17 -0.51 8.06 -52.49 -0.42 -0.93 16 34 H 0.15 -0.10 8.06 -52.49 -0.42 -0.52 16 35 H 0.18 -0.10 8.06 -52.48 -0.42 -0.52 16 36 H 0.07 0.07 8.14 -51.92 -0.42 -0.35 16 37 H 0.09 -0.21 7.90 -51.93 -0.41 -0.62 16 38 H 0.42 -1.00 8.19 -40.82 -0.33 -1.33 16 39 H 0.12 -0.28 7.96 -51.93 -0.41 -0.70 16 40 H 0.38 -0.88 8.70 45.56 0.40 -0.48 16 41 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 42 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 43 H 0.15 -0.21 6.17 -52.49 -0.32 -0.54 16 LS Contribution 361.86 15.07 5.45 5.45 Total: 0.00 -9.34 361.86 -9.87 -19.21 By element: Atomic # 1 Polarization: -5.44 SS G_CDS: -5.95 Total: -11.39 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -3.64 Total: -2.25 kcal Atomic # 7 Polarization: -0.94 SS G_CDS: -0.17 Total: -1.11 kcal Atomic # 8 Polarization: -2.97 SS G_CDS: -0.38 Total: -3.35 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: -5.19 Total: -6.56 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -9.34 -9.87 -19.21 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_13940406.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.471 kcal (2) G-P(sol) polarization free energy of solvation -9.341 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 94.130 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.870 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.211 kcal (6) G-S(sol) free energy of system = (1) + (5) 84.260 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds