Wall clock time and date at job start Sun Mar 7 2021 04:36:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86299 * 109.47631 * 2 1 4 4 C 1.50706 * 109.47150 * 120.00358 * 2 1 3 5 5 C 1.31115 * 118.54125 * 249.99598 * 4 2 1 6 6 N 1.38930 * 121.84506 * 180.12309 * 5 4 2 7 7 C 1.47036 * 118.88400 * 346.94263 * 6 5 4 8 8 C 1.50696 * 109.82242 * 163.20051 * 7 6 5 9 9 O 1.21280 * 120.00015 * 340.00727 * 8 7 6 10 10 N 1.34776 * 120.00096 * 160.00052 * 8 7 6 11 11 C 1.46491 * 120.00139 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.85073 * 336.19021 * 11 10 8 13 13 C 1.53785 * 113.61805 * 107.50335 * 11 10 8 14 14 C 1.53781 * 87.08263 * 89.11598 * 13 11 10 15 15 H 1.08999 * 113.61488 * 270.88710 * 14 13 11 16 16 C 1.53000 * 113.69163 * 139.99186 * 14 13 11 17 17 N 1.46497 * 109.46674 * 87.46266 * 16 14 13 18 18 C 1.34953 * 126.03370 * 125.00202 * 17 16 14 19 19 C 1.35316 * 107.74609 * 179.97438 * 18 17 16 20 20 C 1.39869 * 107.91942 * 359.97438 * 19 18 17 21 21 N 1.30836 * 108.20288 * 359.74349 * 20 19 18 22 22 C 1.53782 * 113.61539 * 205.00220 * 11 10 8 23 23 C 1.53542 * 107.65369 * 43.66309 * 7 6 5 24 24 C 1.50196 * 118.54786 * 70.20821 * 4 2 1 25 25 H 0.96702 * 114.00308 * 60.00015 * 1 2 3 26 26 H 1.09001 * 109.47166 * 240.00019 * 2 1 3 27 27 H 1.48502 * 109.99887 * 59.99849 * 3 2 1 28 28 H 1.48499 * 110.00357 * 181.31859 * 3 2 1 29 29 H 1.08002 * 119.08189 * 0.40812 * 5 4 2 30 30 H 0.96998 * 120.55664 * 166.96894 * 6 5 4 31 31 H 1.08996 * 109.82254 * 284.12499 * 7 6 5 32 32 H 0.96999 * 119.99778 * 0.02562 * 10 8 7 33 33 H 1.09002 * 113.61270 * 203.66214 * 13 11 10 34 34 H 1.08996 * 113.61018 * 334.56179 * 13 11 10 35 35 H 1.08999 * 109.46916 * 207.46393 * 16 14 13 36 36 H 1.08997 * 109.46915 * 327.46323 * 16 14 13 37 37 H 1.07994 * 126.12596 * 359.97438 * 18 17 16 38 38 H 1.08003 * 126.04298 * 180.02562 * 19 18 17 39 39 H 1.08006 * 125.89950 * 179.97438 * 20 19 18 40 40 H 1.09007 * 113.61580 * 25.42426 * 22 11 10 41 41 H 1.08999 * 113.61840 * 156.24702 * 22 11 10 42 42 H 1.09002 * 109.62588 * 58.77691 * 23 7 6 43 43 H 1.09000 * 109.61911 * 179.32896 * 23 7 6 44 44 H 1.09009 * 109.45018 * 39.79976 * 24 4 2 45 45 H 1.09003 * 109.00511 * 280.27197 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 2.5116 -0.0029 2.1694 6 7 3.0020 -0.5874 3.3304 7 6 2.6166 -1.9707 3.6467 8 6 3.5516 -2.5373 4.6839 9 8 4.6399 -2.0318 4.8600 10 7 3.1784 -3.6056 5.4158 11 6 4.0871 -4.1561 6.4244 12 1 5.1326 -3.9203 6.2260 13 6 3.6517 -3.8650 7.8704 14 6 2.8444 -5.1723 7.8072 15 1 1.8285 -5.0406 7.4347 16 6 2.9026 -5.9937 9.0967 17 7 1.8443 -5.5491 10.0069 18 6 0.8971 -6.3314 10.5655 19 6 0.1148 -5.5434 11.3389 20 6 0.6008 -4.2349 11.2503 21 7 1.6411 -4.2381 10.4568 22 6 3.8386 -5.6422 6.7321 23 6 2.7175 -2.7898 2.3519 24 6 1.7494 -2.1984 1.3247 25 1 -0.3934 0.4417 -0.7650 26 1 1.7923 -0.5138 -0.8900 27 1 1.5616 2.4679 1.2085 28 1 3.5347 1.7702 -0.0321 29 1 2.6070 1.0649 2.0387 30 1 3.5884 -0.0912 3.9227 31 1 1.5926 -1.9931 4.0194 32 1 2.3082 -4.0101 5.2747 33 1 4.4722 -3.8928 8.5874 34 1 3.0323 -2.9735 7.9687 35 1 2.7606 -7.0487 8.8621 36 1 3.8733 -5.8547 9.5725 37 1 0.7838 -7.3956 10.4212 38 1 -0.7344 -5.8677 11.9222 39 1 0.1907 -3.3716 11.7533 40 1 3.3698 -6.1855 5.9115 41 1 4.7105 -6.1561 7.1366 42 1 3.7357 -2.7406 1.9659 43 1 2.4492 -3.8269 2.5530 44 1 1.9374 -2.6495 0.3503 45 1 0.7249 -2.4122 1.6296 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:36:11 Heat of formation + Delta-G solvation = 67.622046 kcal Electronic energy + Delta-G solvation = -26418.115307 eV Core-core repulsion = 22633.276077 eV Total energy + Delta-G solvation = -3784.839230 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.168 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.12114 -41.59611 -40.32088 -39.03461 -37.31151 -35.18829 -33.75653 -33.32136 -32.78173 -30.96371 -28.82640 -27.43429 -26.87637 -25.42930 -24.43981 -23.56288 -22.05269 -21.93754 -21.62872 -20.46915 -19.23423 -19.08279 -18.24696 -18.21386 -17.57308 -17.26013 -16.57583 -16.30964 -16.11716 -15.62861 -15.50201 -15.24394 -15.08001 -14.87872 -14.61695 -14.57147 -14.34439 -14.19703 -13.82272 -13.67971 -13.64419 -13.59257 -13.51414 -12.98057 -12.87724 -12.37949 -12.33603 -11.82688 -11.78930 -11.70630 -11.59016 -11.38101 -11.34679 -10.86887 -10.32600 -10.19763 -10.07228 -9.49833 -8.49492 -4.90018 0.99513 1.28299 1.40094 1.43291 1.56158 1.69986 1.77098 1.98150 2.02712 2.55476 3.15754 3.28128 3.40795 3.49796 3.60257 3.66028 3.67879 3.85705 3.89598 3.92789 3.98922 4.02550 4.17637 4.21249 4.27629 4.32132 4.48250 4.54711 4.56266 4.60062 4.64491 4.70213 4.70946 4.83087 4.89949 4.92675 4.97227 5.01663 5.13044 5.17092 5.24394 5.41999 5.51915 5.75764 6.08292 6.16907 6.33490 6.75363 6.81219 6.81350 7.02349 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.045 4.045 3 Si 0.665 3.335 4 C -0.232 4.232 5 C 0.135 3.865 6 N -0.732 5.732 7 C 0.137 3.863 8 C 0.517 3.483 9 O -0.527 6.527 10 N -0.708 5.708 11 C 0.117 3.883 12 H 0.107 0.893 13 C -0.133 4.133 14 C -0.121 4.121 15 H 0.095 0.905 16 C 0.142 3.858 17 N -0.372 5.372 18 C 0.050 3.950 19 C -0.274 4.274 20 C 0.041 3.959 21 N -0.290 5.290 22 C -0.137 4.137 23 C -0.127 4.127 24 C -0.052 4.052 25 H 0.376 0.624 26 H 0.065 0.935 27 H -0.254 1.254 28 H -0.257 1.257 29 H 0.126 0.874 30 H 0.409 0.591 31 H 0.091 0.909 32 H 0.403 0.597 33 H 0.093 0.907 34 H 0.075 0.925 35 H 0.098 0.902 36 H 0.087 0.913 37 H 0.172 0.828 38 H 0.147 0.853 39 H 0.182 0.818 40 H 0.079 0.921 41 H 0.101 0.899 42 H 0.077 0.923 43 H 0.080 0.920 44 H 0.075 0.925 45 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.616 -4.368 -2.269 5.574 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.157 4.157 3 Si 0.568 3.432 4 C -0.242 4.242 5 C 0.015 3.985 6 N -0.365 5.365 7 C 0.028 3.972 8 C 0.302 3.698 9 O -0.403 6.403 10 N -0.359 5.359 11 C 0.012 3.988 12 H 0.125 0.875 13 C -0.172 4.172 14 C -0.140 4.140 15 H 0.113 0.887 16 C 0.021 3.979 17 N -0.155 5.155 18 C -0.096 4.096 19 C -0.304 4.304 20 C -0.145 4.145 21 N -0.111 5.111 22 C -0.176 4.176 23 C -0.165 4.165 24 C -0.089 4.089 25 H 0.223 0.777 26 H 0.082 0.918 27 H -0.180 1.180 28 H -0.182 1.182 29 H 0.142 0.858 30 H 0.245 0.755 31 H 0.109 0.891 32 H 0.238 0.762 33 H 0.111 0.889 34 H 0.094 0.906 35 H 0.116 0.884 36 H 0.105 0.895 37 H 0.190 0.810 38 H 0.165 0.835 39 H 0.199 0.801 40 H 0.098 0.902 41 H 0.120 0.880 42 H 0.095 0.905 43 H 0.099 0.901 44 H 0.094 0.906 45 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -0.248 -3.183 -1.774 3.653 hybrid contribution -0.899 -1.084 0.862 1.651 sum -1.147 -4.268 -0.912 4.512 Atomic orbital electron populations 1.86515 1.18177 1.81630 1.49295 1.24426 0.84953 1.08649 0.97695 0.95548 0.80979 0.79255 0.87437 1.20069 1.12059 0.95689 0.96432 1.20252 0.96344 0.95575 0.86338 1.44217 1.55296 1.12471 1.24478 1.21001 0.97358 0.84279 0.94596 1.20590 0.87719 0.80209 0.81293 1.90740 1.22339 1.59349 1.67831 1.45587 1.20269 1.31982 1.38110 1.21869 0.95264 0.93693 0.87973 0.87545 1.23395 0.99990 0.97778 0.96009 1.22901 0.99777 0.97077 0.94277 0.88706 1.21780 0.89382 0.98652 0.88126 1.48743 1.24227 1.05785 1.36743 1.22608 0.91486 0.98166 0.97358 1.21562 1.06196 0.93279 1.09332 1.23954 0.94317 0.98406 0.97795 1.77395 1.19465 0.97727 1.16549 1.23356 0.99923 0.95900 0.98389 1.21891 1.01860 0.98664 0.94128 1.19967 0.98767 0.91366 0.98794 0.77740 0.91753 1.17984 1.18190 0.85752 0.75453 0.89108 0.76245 0.88850 0.90578 0.88379 0.89459 0.81049 0.83549 0.80123 0.90214 0.88043 0.90465 0.90116 0.90605 0.91027 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.52 12.86 -35.23 -0.45 -0.98 16 2 C -0.05 -0.03 2.80 36.01 0.10 0.07 16 3 Si 0.67 -0.08 29.92 -169.99 -5.09 -5.17 16 4 C -0.23 -0.57 5.40 -101.34 -0.55 -1.11 16 5 C 0.14 0.40 9.61 -16.08 -0.15 0.24 16 6 N -0.73 -1.85 5.46 -55.34 -0.30 -2.15 16 7 C 0.14 0.11 3.36 -68.51 -0.23 -0.12 16 8 C 0.52 0.89 7.08 -10.99 -0.08 0.81 16 9 O -0.53 -2.95 15.70 5.56 0.09 -2.87 16 10 N -0.71 0.72 5.26 -53.02 -0.28 0.44 16 11 C 0.12 -0.11 4.32 -67.12 -0.29 -0.40 16 12 H 0.11 0.09 7.46 -51.93 -0.39 -0.30 16 13 C -0.13 0.06 7.43 -25.92 -0.19 -0.13 16 14 C -0.12 0.28 3.70 -89.80 -0.33 -0.05 16 15 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 16 C 0.14 -0.31 6.35 -4.04 -0.03 -0.33 16 17 N -0.37 -0.33 3.68 -61.37 -0.23 -0.55 16 18 C 0.05 0.00 11.45 -17.22 -0.20 -0.20 16 19 C -0.27 -0.23 10.80 -40.01 -0.43 -0.66 16 20 C 0.04 0.08 12.03 -17.37 -0.21 -0.13 16 21 N -0.29 -0.94 12.42 30.63 0.38 -0.56 16 22 C -0.14 0.48 7.39 -25.91 -0.19 0.29 16 23 C -0.13 -0.01 5.47 -26.43 -0.14 -0.15 16 24 C -0.05 -0.05 5.85 -28.11 -0.16 -0.21 16 25 H 0.38 -1.44 8.74 45.56 0.40 -1.05 16 26 H 0.06 -0.03 7.96 -51.93 -0.41 -0.45 16 27 H -0.25 -0.73 6.88 56.52 0.39 -0.34 16 28 H -0.26 -0.68 7.11 56.52 0.40 -0.28 16 29 H 0.13 0.34 4.34 -52.49 -0.23 0.11 16 30 H 0.41 1.11 8.12 -40.82 -0.33 0.77 16 31 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.40 -1.34 8.70 -40.82 -0.36 -1.70 16 33 H 0.09 -0.03 7.90 -51.93 -0.41 -0.44 16 34 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 35 H 0.10 -0.45 8.07 -51.93 -0.42 -0.86 16 36 H 0.09 -0.20 7.85 -51.93 -0.41 -0.61 16 37 H 0.17 -0.57 8.06 -52.49 -0.42 -0.99 16 38 H 0.15 -0.13 8.06 -52.48 -0.42 -0.56 16 39 H 0.18 -0.09 8.06 -52.48 -0.42 -0.51 16 40 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 41 H 0.10 -0.45 8.10 -51.93 -0.42 -0.87 16 42 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 43 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 44 H 0.08 0.03 8.14 -51.92 -0.42 -0.39 16 45 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 LS Contribution 368.90 15.07 5.56 5.56 Total: 0.00 -9.88 368.90 -10.24 -20.12 By element: Atomic # 1 Polarization: -4.91 SS G_CDS: -6.84 Total: -11.75 kcal Atomic # 6 Polarization: 1.00 SS G_CDS: -3.09 Total: -2.09 kcal Atomic # 7 Polarization: -2.40 SS G_CDS: -0.43 Total: -2.83 kcal Atomic # 8 Polarization: -3.48 SS G_CDS: -0.37 Total: -3.85 kcal Atomic # 14 Polarization: -0.08 SS G_CDS: -5.09 Total: -5.17 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -9.88 -10.24 -20.12 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.746 kcal (2) G-P(sol) polarization free energy of solvation -9.880 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.866 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.244 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.123 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.622 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds