Wall clock time and date at job start Sun Mar 7 2021 04:36:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.47185 * 2 1 4 4 C 1.50701 * 109.46720 * 119.99493 * 2 1 3 5 5 C 1.31116 * 118.55142 * 250.02803 * 4 2 1 6 6 N 1.38921 * 121.84951 * 179.57500 * 5 4 2 7 7 C 1.47032 * 118.88704 * 13.33108 * 6 5 4 8 8 C 1.53466 * 107.50777 * 316.24918 * 7 6 5 9 9 C 1.50212 * 118.54532 * 70.00119 * 4 2 1 10 10 C 1.50698 * 109.32899 * 320.31608 * 9 4 2 11 11 O 1.21282 * 119.99364 * 239.65341 * 10 9 4 12 12 N 1.34774 * 120.00600 * 59.64867 * 10 9 4 13 13 C 1.46496 * 120.00099 * 180.02562 * 12 10 9 14 14 H 1.08994 * 112.91109 * 23.75176 * 13 12 10 15 15 C 1.53787 * 113.61210 * 155.00440 * 13 12 10 16 16 C 1.53778 * 87.08035 * 89.11438 * 15 13 12 17 17 H 1.08999 * 113.61280 * 270.79710 * 16 15 13 18 18 C 1.53001 * 113.61263 * 139.98349 * 16 15 13 19 19 N 1.46505 * 109.47164 * 174.99956 * 18 16 15 20 20 C 1.34944 * 126.03783 * 125.00074 * 19 18 16 21 21 C 1.35309 * 107.74568 * 179.97438 * 20 19 18 22 22 C 1.39869 * 107.92224 * 359.97438 * 21 20 19 23 23 N 1.30844 * 108.20206 * 359.74524 * 22 21 20 24 24 C 1.53778 * 87.08449 * 25.43264 * 16 15 13 25 25 H 0.96698 * 114.00683 * 300.00503 * 1 2 3 26 26 H 1.08997 * 109.47710 * 239.99800 * 2 1 3 27 27 H 1.48498 * 109.99770 * 299.99552 * 3 2 1 28 28 H 1.48508 * 109.99857 * 61.31476 * 3 2 1 29 29 H 1.08001 * 119.07085 * 359.58645 * 5 4 2 30 30 H 0.96995 * 120.55421 * 193.35621 * 6 5 4 31 31 H 1.09003 * 109.82066 * 75.87456 * 7 6 5 32 32 H 1.08992 * 109.82001 * 196.73359 * 7 6 5 33 33 H 1.09000 * 109.71478 * 301.38153 * 8 7 6 34 34 H 1.08999 * 109.47729 * 180.85083 * 8 7 6 35 35 H 1.09005 * 109.32457 * 79.96282 * 9 4 2 36 36 H 0.97002 * 119.99411 * 0.02562 * 12 10 9 37 37 H 1.08998 * 113.61103 * 203.66698 * 15 13 12 38 38 H 1.08997 * 113.61087 * 334.48007 * 15 13 12 39 39 H 1.09008 * 109.46870 * 294.99672 * 18 16 15 40 40 H 1.09000 * 109.47055 * 54.99500 * 18 16 15 41 41 H 1.08002 * 126.12782 * 359.97438 * 20 19 18 42 42 H 1.08002 * 126.04481 * 180.02562 * 21 20 19 43 43 H 1.07997 * 125.90405 * 180.02562 * 22 21 20 44 44 H 1.08993 * 113.61229 * 220.02023 * 24 16 15 45 45 H 1.09000 * 113.61263 * 89.11673 * 24 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7103 1.2306 5 6 2.5110 -0.0027 2.1699 6 7 2.9912 -0.5855 3.3359 7 6 3.1170 -2.0491 3.3987 8 6 1.8440 -2.6486 2.7862 9 6 1.7450 -2.1977 1.3271 10 6 0.3896 -2.5671 0.7816 11 8 -0.4174 -3.1284 1.4920 12 7 0.0742 -2.2738 -0.4955 13 6 -1.2436 -2.6324 -1.0254 14 1 -1.9993 -2.7387 -0.2472 15 6 -1.6931 -1.7538 -2.2049 16 6 -0.9889 -2.7653 -3.1246 17 1 0.0608 -2.5340 -3.3052 18 6 -1.7612 -3.0650 -4.4109 19 7 -0.9591 -3.9404 -5.2693 20 6 -1.3481 -5.1293 -5.7754 21 6 -0.3245 -5.6185 -6.5127 22 6 0.7260 -4.6967 -6.4557 23 7 0.3445 -3.6876 -5.7154 24 6 -1.2100 -3.8081 -2.0162 25 1 -0.3934 0.4417 0.7650 26 1 1.7924 -0.5138 -0.8899 27 1 1.5616 2.4678 -1.2085 28 1 1.5878 2.4586 1.2243 29 1 2.6180 1.0633 2.0333 30 1 3.2389 -0.0362 4.0959 31 1 3.9902 -2.3698 2.8305 32 1 3.2142 -2.3675 4.4366 33 1 0.9709 -2.2992 3.3373 34 1 1.8969 -3.7364 2.8303 35 1 2.5175 -2.6967 0.7419 36 1 0.7199 -1.8251 -1.0636 37 1 -2.7745 -1.7217 -2.3380 38 1 -1.2363 -0.7642 -2.2111 39 1 -2.7005 -3.5599 -4.1638 40 1 -1.9689 -2.1325 -4.9357 41 1 -2.3051 -5.6051 -5.6198 42 1 -0.3196 -6.5549 -7.0508 43 1 1.6845 -4.7980 -6.9428 44 1 -0.3620 -4.4773 -1.8710 45 1 -2.1592 -4.3376 -2.0979 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:36:15 Heat of formation + Delta-G solvation = 82.860714 kcal Electronic energy + Delta-G solvation = -27822.849674 eV Core-core repulsion = 24038.671243 eV Total energy + Delta-G solvation = -3784.178432 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.168 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.02222 -41.54326 -40.14498 -38.67447 -37.72499 -34.77641 -33.71760 -32.89562 -32.70205 -30.90023 -28.57775 -27.30573 -26.67026 -26.01700 -23.98873 -23.29146 -22.02201 -21.70833 -21.50182 -20.07164 -19.37216 -19.05815 -18.23325 -17.80366 -17.43678 -16.91625 -16.40735 -16.32580 -15.99841 -15.79492 -15.44222 -15.38297 -15.10447 -14.80006 -14.47822 -14.45203 -14.18279 -13.98819 -13.92162 -13.67098 -13.46326 -13.38381 -13.18144 -12.75342 -12.65135 -12.20275 -12.14718 -11.91815 -11.65986 -11.50193 -11.47653 -11.44643 -11.24082 -10.52135 -10.39939 -10.21259 -9.63149 -9.38925 -8.56426 -4.96898 1.08426 1.19321 1.30139 1.53617 1.65979 1.92843 2.01842 2.05686 2.40699 2.50079 3.39847 3.44167 3.54406 3.57777 3.63078 3.74961 3.90140 3.96390 4.01698 4.05341 4.16910 4.21141 4.24640 4.35898 4.40229 4.46869 4.49794 4.55045 4.68649 4.69715 4.75153 4.76852 4.80421 4.95679 5.00550 5.07236 5.12955 5.16018 5.20594 5.27997 5.29014 5.37080 5.83496 5.83896 6.17702 6.19410 6.47239 6.72615 6.81543 6.88852 7.54923 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.056 4.056 3 Si 0.670 3.330 4 C -0.281 4.281 5 C 0.154 3.846 6 N -0.747 5.747 7 C 0.119 3.881 8 C -0.119 4.119 9 C -0.040 4.040 10 C 0.534 3.466 11 O -0.550 6.550 12 N -0.686 5.686 13 C 0.134 3.866 14 H 0.099 0.901 15 C -0.135 4.135 16 C -0.123 4.123 17 H 0.102 0.898 18 C 0.142 3.858 19 N -0.368 5.368 20 C 0.052 3.948 21 C -0.276 4.276 22 C 0.043 3.957 23 N -0.296 5.296 24 C -0.149 4.149 25 H 0.370 0.630 26 H 0.105 0.895 27 H -0.260 1.260 28 H -0.265 1.265 29 H 0.134 0.866 30 H 0.403 0.597 31 H 0.064 0.936 32 H 0.082 0.918 33 H 0.079 0.921 34 H 0.079 0.921 35 H 0.094 0.906 36 H 0.400 0.600 37 H 0.092 0.908 38 H 0.085 0.915 39 H 0.096 0.904 40 H 0.085 0.915 41 H 0.171 0.829 42 H 0.146 0.854 43 H 0.182 0.818 44 H 0.069 0.931 45 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.889 1.189 0.717 3.205 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.167 4.167 3 Si 0.573 3.427 4 C -0.292 4.292 5 C 0.031 3.969 6 N -0.377 5.377 7 C -0.005 4.005 8 C -0.158 4.158 9 C -0.061 4.061 10 C 0.321 3.679 11 O -0.428 6.428 12 N -0.338 5.338 13 C 0.028 3.972 14 H 0.117 0.883 15 C -0.173 4.173 16 C -0.142 4.142 17 H 0.121 0.879 18 C 0.021 3.979 19 N -0.151 5.151 20 C -0.094 4.094 21 C -0.306 4.306 22 C -0.143 4.143 23 N -0.118 5.118 24 C -0.188 4.188 25 H 0.218 0.782 26 H 0.123 0.877 27 H -0.185 1.185 28 H -0.190 1.190 29 H 0.150 0.850 30 H 0.237 0.763 31 H 0.082 0.918 32 H 0.101 0.899 33 H 0.098 0.902 34 H 0.098 0.902 35 H 0.112 0.888 36 H 0.238 0.762 37 H 0.110 0.890 38 H 0.104 0.896 39 H 0.115 0.885 40 H 0.103 0.897 41 H 0.189 0.811 42 H 0.164 0.836 43 H 0.199 0.801 44 H 0.087 0.913 45 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 2.443 2.397 1.238 3.639 hybrid contribution -0.943 -0.579 0.005 1.106 sum 1.500 1.818 1.243 2.665 Atomic orbital electron populations 1.86722 1.17714 1.79286 1.49243 1.24655 0.84289 1.09642 0.98134 0.95222 0.92360 0.75309 0.79799 1.20534 1.13274 0.94768 1.00609 1.20515 0.92793 0.96810 0.86751 1.44614 1.71752 1.06559 1.14726 1.21661 0.97360 0.79998 1.01524 1.21696 0.98630 1.01157 0.94290 1.19702 0.94994 0.93746 0.97688 1.20317 0.88884 0.77287 0.81392 1.90686 1.51247 1.42749 1.58115 1.45674 1.15793 1.59937 1.12408 1.21549 0.86388 0.94348 0.94961 0.88310 1.23294 1.01073 0.98772 0.94196 1.22953 1.01081 0.97934 0.92187 0.87945 1.21816 0.92410 0.94045 0.89631 1.48736 1.11746 1.15873 1.38712 1.22585 1.00691 0.88225 0.97934 1.21540 0.94651 1.04132 1.10265 1.23908 1.00191 0.92077 0.98158 1.77320 0.93509 1.23702 1.17231 1.23553 1.02618 0.96982 0.95672 0.78200 0.87693 1.18480 1.19035 0.84953 0.76266 0.91787 0.89932 0.90249 0.90223 0.88788 0.76200 0.88960 0.89645 0.88530 0.89653 0.81132 0.83618 0.80128 0.91256 0.89353 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.21 9.14 -35.23 -0.32 -0.11 16 2 C -0.06 0.09 1.74 36.01 0.06 0.16 16 3 Si 0.67 -1.22 29.96 -169.99 -5.09 -6.31 16 4 C -0.28 0.28 5.14 -101.33 -0.52 -0.24 16 5 C 0.15 -0.25 9.62 -16.08 -0.15 -0.40 16 6 N -0.75 1.58 5.83 -60.72 -0.35 1.22 16 7 C 0.12 -0.23 7.16 -3.51 -0.03 -0.26 16 8 C -0.12 -0.04 4.89 -26.47 -0.13 -0.17 16 9 C -0.04 -0.01 2.75 -93.14 -0.26 -0.27 16 10 C 0.53 1.50 6.37 -10.99 -0.07 1.43 16 11 O -0.55 -3.75 15.40 5.56 0.09 -3.66 16 12 N -0.69 -0.58 2.92 -53.02 -0.15 -0.74 16 13 C 0.13 0.11 4.27 -67.12 -0.29 -0.18 16 14 H 0.10 0.28 7.47 -51.93 -0.39 -0.11 16 15 C -0.13 0.14 7.39 -25.92 -0.19 -0.06 16 16 C -0.12 0.05 3.75 -89.81 -0.34 -0.28 16 17 H 0.10 0.13 7.97 -51.93 -0.41 -0.29 16 18 C 0.14 -0.09 6.35 -4.04 -0.03 -0.12 16 19 N -0.37 -0.71 3.68 -61.36 -0.23 -0.93 16 20 C 0.05 0.05 11.45 -17.23 -0.20 -0.15 16 21 C -0.28 -0.42 10.80 -40.02 -0.43 -0.86 16 22 C 0.04 0.10 12.03 -17.36 -0.21 -0.11 16 23 N -0.30 -1.16 12.28 30.62 0.38 -0.78 16 24 C -0.15 -0.05 7.43 -25.92 -0.19 -0.24 16 25 H 0.37 -0.49 8.70 45.56 0.40 -0.09 16 26 H 0.11 -0.27 6.39 -51.93 -0.33 -0.60 16 27 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 28 H -0.26 -0.07 6.84 56.52 0.39 0.31 16 29 H 0.13 -0.38 4.30 -52.49 -0.23 -0.60 16 30 H 0.40 -1.52 8.96 -40.82 -0.37 -1.88 16 31 H 0.06 -0.15 8.14 -51.93 -0.42 -0.58 16 32 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 33 H 0.08 0.21 7.76 -51.93 -0.40 -0.19 16 34 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 35 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.40 -0.13 5.61 -40.82 -0.23 -0.36 16 37 H 0.09 -0.19 8.10 -51.93 -0.42 -0.62 16 38 H 0.08 -0.02 7.83 -51.93 -0.41 -0.43 16 39 H 0.10 -0.27 7.77 -51.92 -0.40 -0.67 16 40 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 41 H 0.17 -0.38 8.06 -52.49 -0.42 -0.80 16 42 H 0.15 -0.04 8.06 -52.49 -0.42 -0.46 16 43 H 0.18 -0.05 8.06 -52.49 -0.42 -0.48 16 44 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 45 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 LS Contribution 356.06 15.07 5.37 5.37 Total: 0.00 -8.51 356.06 -9.91 -18.42 By element: Atomic # 1 Polarization: -4.11 SS G_CDS: -6.62 Total: -10.73 kcal Atomic # 6 Polarization: 1.22 SS G_CDS: -2.97 Total: -1.75 kcal Atomic # 7 Polarization: -0.87 SS G_CDS: -0.36 Total: -1.23 kcal Atomic # 8 Polarization: -3.53 SS G_CDS: -0.24 Total: -3.77 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.09 Total: -6.31 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -8.51 -9.91 -18.42 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 101.281 kcal (2) G-P(sol) polarization free energy of solvation -8.515 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.766 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.905 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.420 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.861 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds