Wall clock time and date at job start Sun Mar 7 2021 04:36:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86301 * 109.47268 * 2 1 4 4 C 1.50704 * 109.47433 * 240.00096 * 2 1 3 5 5 C 1.34490 * 125.49873 * 150.24977 * 4 2 1 6 6 C 1.46747 * 106.36805 * 180.15580 * 5 4 2 7 7 C 1.47264 * 126.96988 * 179.88047 * 6 5 4 8 8 O 1.21633 * 119.99975 * 179.68496 * 7 6 5 9 9 N 1.34777 * 119.99990 * 359.41144 * 7 6 5 10 10 C 1.46504 * 119.99854 * 180.27781 * 9 7 6 11 11 H 1.08994 * 112.85022 * 336.19146 * 10 9 7 12 12 C 1.53783 * 113.61316 * 107.50055 * 10 9 7 13 13 C 1.53783 * 87.07906 * 89.11585 * 12 10 9 14 14 H 1.08999 * 113.60886 * 270.88202 * 13 12 10 15 15 C 1.53002 * 113.69003 * 139.99149 * 13 12 10 16 16 N 1.46503 * 109.47083 * 87.45949 * 15 13 12 17 17 C 1.34943 * 126.03421 * 124.71812 * 16 15 13 18 18 C 1.35321 * 107.74515 * 179.83909 * 17 16 15 19 19 C 1.39876 * 107.91810 * 0.42276 * 18 17 16 20 20 N 1.30838 * 108.20111 * 359.73684 * 19 18 17 21 21 C 1.53774 * 87.08299 * 25.43119 * 13 12 10 22 22 C 1.36334 * 106.06145 * 359.61895 * 6 5 4 23 23 C 1.51003 * 126.79473 * 180.27181 * 22 6 5 24 24 C 1.53386 * 108.25507 * 164.30499 * 23 22 6 25 25 C 1.53157 * 109.05146 * 48.45345 * 24 23 22 26 26 C 1.53129 * 109.52424 * 290.43311 * 25 24 23 27 27 N 1.35214 * 108.66302 * 0.24617 * 22 6 5 28 28 H 0.96698 * 114.00234 * 60.00139 * 1 2 3 29 29 H 1.09004 * 109.47324 * 120.00327 * 2 1 3 30 30 H 1.48498 * 109.99810 * 59.99904 * 3 2 1 31 31 H 1.48499 * 109.99843 * 181.31776 * 3 2 1 32 32 H 1.08001 * 126.81634 * 0.04392 * 5 4 2 33 33 H 0.97000 * 119.99736 * 0.27056 * 9 7 6 34 34 H 1.09003 * 113.60807 * 203.66362 * 12 10 9 35 35 H 1.08995 * 113.61705 * 334.55989 * 12 10 9 36 36 H 1.08994 * 109.46962 * 207.46301 * 15 13 12 37 37 H 1.08997 * 109.47084 * 327.46292 * 15 13 12 38 38 H 1.07998 * 126.12958 * 359.97438 * 17 16 15 39 39 H 1.07995 * 126.04265 * 180.15761 * 18 17 16 40 40 H 1.07995 * 125.89620 * 179.75542 * 19 18 17 41 41 H 1.09004 * 113.61080 * 220.01891 * 21 13 12 42 42 H 1.08995 * 113.61678 * 89.11621 * 21 13 12 43 43 H 1.08998 * 109.70461 * 283.99519 * 23 22 6 44 44 H 1.09005 * 109.70550 * 44.57280 * 23 22 6 45 45 H 1.08998 * 109.54261 * 168.32972 * 24 23 22 46 46 H 1.09006 * 109.54207 * 288.49931 * 24 23 22 47 47 H 1.09005 * 109.45775 * 50.44207 * 25 24 23 48 48 H 1.09002 * 109.46643 * 170.41281 * 25 24 23 49 49 H 1.09000 * 109.56755 * 170.83345 * 26 25 24 50 50 H 1.09005 * 109.56203 * 291.17032 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 3.0879 -0.4495 -1.8653 6 6 3.1547 -1.3768 -3.0008 7 6 4.2327 -1.4785 -3.9989 8 8 4.1602 -2.3027 -4.8905 9 7 5.2970 -0.6547 -3.9277 10 6 6.3665 -0.7519 -4.9242 11 1 6.4178 -1.7333 -5.3956 12 6 6.3842 0.4159 -5.9246 13 6 7.3026 1.1488 -4.9325 14 1 6.7627 1.7406 -4.1933 15 6 8.4363 1.9267 -5.6036 16 7 7.9688 3.2719 -5.9473 17 6 8.5437 4.4328 -5.5695 18 6 7.8135 5.4444 -6.0934 19 6 6.7504 4.8826 -6.8080 20 7 6.8425 3.5803 -6.7212 21 6 7.7258 -0.2383 -4.4210 22 6 2.0192 -2.1289 -2.9408 23 6 1.6158 -3.2348 -3.8866 24 6 0.4950 -4.0471 -3.2259 25 6 -0.5700 -3.0858 -2.6900 26 6 -0.0053 -2.3103 -1.4964 27 7 1.2884 -1.7251 -1.8772 28 1 -0.3933 0.4417 -0.7650 29 1 1.7923 -0.5139 0.8900 30 1 1.5614 2.4678 1.2085 31 1 3.5346 1.7702 -0.0321 32 1 3.8211 0.2958 -1.5944 33 1 5.3548 0.0026 -3.2167 34 1 6.8686 0.1731 -6.8705 35 1 5.4132 0.8935 -6.0556 36 1 9.2816 1.9995 -4.9194 37 1 8.7463 1.4072 -6.5103 38 1 9.4294 4.5360 -4.9602 39 1 8.0134 6.4993 -5.9765 40 1 5.9858 5.4293 -7.3399 41 1 7.8379 -0.2887 -3.3379 42 1 8.5769 -0.6598 -4.9557 43 1 1.2565 -2.8056 -4.8219 44 1 2.4717 -3.8805 -4.0835 45 1 0.0465 -4.7149 -3.9614 46 1 0.9056 -4.6334 -2.4038 47 1 -0.8557 -2.3860 -3.4754 48 1 -1.4452 -3.6532 -2.3733 49 1 -0.6972 -1.5158 -1.2170 50 1 0.1343 -2.9879 -0.6540 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_16915396.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:36:19 Heat of formation + Delta-G solvation = 84.057889 kcal Electronic energy + Delta-G solvation = -31973.001620 eV Core-core repulsion = 27776.885202 eV Total energy + Delta-G solvation = -4196.116418 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.184 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.76443 -41.99948 -40.87602 -39.03841 -38.05029 -36.91320 -34.85306 -33.52942 -33.16887 -31.18922 -30.89386 -29.59393 -28.39844 -26.70164 -26.58462 -24.69656 -24.67975 -23.46855 -21.87558 -21.79205 -21.51981 -21.21845 -20.20307 -19.50887 -18.90110 -18.14303 -17.39430 -16.97103 -16.69725 -16.59975 -16.19809 -16.07394 -15.87997 -15.57401 -15.44848 -15.18394 -15.12912 -15.03119 -14.80888 -14.60093 -14.47548 -14.37283 -14.20433 -13.88518 -13.66253 -13.51614 -13.38906 -13.27720 -12.82369 -12.76252 -12.38131 -12.18520 -12.09390 -12.03458 -11.85833 -11.80757 -11.57412 -11.48980 -11.21637 -10.76278 -10.64133 -10.24005 -9.89196 -9.52562 -9.42121 -8.98851 -5.08196 0.87409 1.00100 1.07371 1.35216 1.56651 1.64761 1.75331 1.96110 2.05225 2.44418 2.71469 3.13726 3.30147 3.43120 3.46832 3.52497 3.65379 3.65968 3.76338 3.79033 3.82616 3.98962 4.04189 4.14597 4.18218 4.25940 4.31343 4.32579 4.37413 4.40635 4.41088 4.56886 4.64942 4.68464 4.72134 4.73941 4.78041 4.81373 4.84468 4.92152 4.93900 5.02626 5.07272 5.15849 5.17853 5.19267 5.20024 5.26036 5.72321 5.78194 5.83374 6.06142 6.16140 6.23442 6.31588 6.75256 6.89178 7.53658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.044 4.044 3 Si 0.716 3.284 4 C -0.010 4.010 5 C -0.168 4.168 6 C -0.234 4.234 7 C 0.597 3.403 8 O -0.547 6.547 9 N -0.711 5.711 10 C 0.122 3.878 11 H 0.105 0.895 12 C -0.133 4.133 13 C -0.121 4.121 14 H 0.094 0.906 15 C 0.142 3.858 16 N -0.371 5.371 17 C 0.049 3.951 18 C -0.275 4.275 19 C 0.041 3.959 20 N -0.288 5.288 21 C -0.139 4.139 22 C 0.122 3.878 23 C -0.056 4.056 24 C -0.130 4.130 25 C -0.139 4.139 26 C 0.099 3.901 27 N -0.425 5.425 28 H 0.380 0.620 29 H 0.116 0.884 30 H -0.252 1.252 31 H -0.253 1.253 32 H 0.146 0.854 33 H 0.399 0.601 34 H 0.091 0.909 35 H 0.076 0.924 36 H 0.097 0.903 37 H 0.087 0.913 38 H 0.171 0.829 39 H 0.146 0.854 40 H 0.182 0.818 41 H 0.077 0.923 42 H 0.099 0.901 43 H 0.089 0.911 44 H 0.100 0.900 45 H 0.079 0.921 46 H 0.067 0.933 47 H 0.076 0.924 48 H 0.088 0.912 49 H 0.107 0.893 50 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.133 2.074 2.045 2.916 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.154 4.154 3 Si 0.616 3.384 4 C -0.119 4.119 5 C -0.193 4.193 6 C -0.244 4.244 7 C 0.387 3.613 8 O -0.425 6.425 9 N -0.362 5.362 10 C 0.017 3.983 11 H 0.123 0.877 12 C -0.172 4.172 13 C -0.140 4.140 14 H 0.112 0.888 15 C 0.020 3.980 16 N -0.153 5.153 17 C -0.097 4.097 18 C -0.305 4.305 19 C -0.146 4.146 20 N -0.109 5.109 21 C -0.178 4.178 22 C 0.004 3.996 23 C -0.093 4.093 24 C -0.167 4.167 25 C -0.176 4.176 26 C -0.022 4.022 27 N -0.101 5.101 28 H 0.228 0.772 29 H 0.134 0.866 30 H -0.177 1.177 31 H -0.178 1.178 32 H 0.163 0.837 33 H 0.233 0.767 34 H 0.109 0.891 35 H 0.095 0.905 36 H 0.115 0.885 37 H 0.105 0.895 38 H 0.189 0.811 39 H 0.164 0.836 40 H 0.199 0.801 41 H 0.096 0.904 42 H 0.117 0.883 43 H 0.107 0.893 44 H 0.118 0.882 45 H 0.098 0.902 46 H 0.086 0.914 47 H 0.094 0.906 48 H 0.107 0.893 49 H 0.125 0.875 50 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -0.404 0.379 2.237 2.305 hybrid contribution 0.637 0.672 0.900 1.291 sum 0.232 1.051 3.137 3.317 Atomic orbital electron populations 1.86483 1.17532 1.81145 1.49693 1.24867 0.84656 1.10383 0.95519 0.94056 0.80987 0.76486 0.86851 1.20634 0.96093 0.95678 0.99504 1.21720 0.97889 1.02822 0.96851 1.19793 0.98019 1.05046 1.01524 1.17299 0.80695 0.79828 0.83465 1.90767 1.78833 1.36984 1.35949 1.45409 1.21111 1.38595 1.31045 1.21770 0.86304 1.00231 0.90039 0.87662 1.23395 1.00706 0.95839 0.97252 1.22892 0.96845 0.95107 0.99200 0.88792 1.21800 0.96647 0.78860 1.00646 1.48756 1.21067 1.05784 1.39740 1.22597 1.00036 0.85908 1.01170 1.21549 1.00048 1.00064 1.08813 1.23943 0.99291 0.91521 0.99809 1.77410 1.03475 1.15942 1.14075 1.23363 0.97593 0.94870 1.01971 1.20389 0.91191 0.97569 0.90423 1.20518 0.99430 0.93533 0.95839 1.21726 0.95887 0.97941 1.01176 1.21941 0.99195 0.99010 0.97484 1.22308 0.82629 0.99012 0.98215 1.43864 1.17524 1.26982 1.21775 0.77239 0.86640 1.17658 1.17769 0.83693 0.76682 0.89088 0.90518 0.88523 0.89458 0.81142 0.83637 0.80149 0.90444 0.88258 0.89272 0.88213 0.90184 0.91387 0.90566 0.89328 0.87516 0.90084 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.77 10.28 -35.23 -0.36 0.41 16 2 C -0.04 0.04 3.00 36.01 0.11 0.15 16 3 Si 0.72 -1.28 31.30 -169.99 -5.32 -6.60 16 4 C -0.01 -0.01 6.14 -81.87 -0.50 -0.51 16 5 C -0.17 -0.19 9.09 -37.47 -0.34 -0.53 16 6 C -0.23 -0.72 6.28 -103.48 -0.65 -1.37 16 7 C 0.60 2.43 7.81 -12.59 -0.10 2.33 16 8 O -0.55 -3.82 14.93 5.25 0.08 -3.74 16 9 N -0.71 -0.91 5.26 -54.14 -0.28 -1.19 16 10 C 0.12 0.07 4.32 -67.12 -0.29 -0.23 16 11 H 0.11 0.22 7.46 -51.93 -0.39 -0.16 16 12 C -0.13 -0.08 7.43 -25.92 -0.19 -0.27 16 13 C -0.12 0.15 3.70 -89.81 -0.33 -0.18 16 14 H 0.09 -0.03 8.14 -51.93 -0.42 -0.46 16 15 C 0.14 -0.21 6.35 -4.04 -0.03 -0.23 16 16 N -0.37 -0.49 3.68 -61.37 -0.23 -0.72 16 17 C 0.05 0.02 11.45 -17.22 -0.20 -0.18 16 18 C -0.28 -0.29 10.80 -40.01 -0.43 -0.72 16 19 C 0.04 0.08 12.03 -17.36 -0.21 -0.12 16 20 N -0.29 -1.02 12.42 30.63 0.38 -0.64 16 21 C -0.14 0.30 7.39 -25.92 -0.19 0.11 16 22 C 0.12 0.30 6.57 -81.64 -0.54 -0.23 16 23 C -0.06 -0.08 5.32 -27.54 -0.15 -0.23 16 24 C -0.13 0.11 5.98 -26.45 -0.16 -0.05 16 25 C -0.14 0.28 5.92 -26.58 -0.16 0.12 16 26 C 0.10 -0.12 6.22 -3.70 -0.02 -0.14 16 27 N -0.43 -0.37 3.11 -107.37 -0.33 -0.70 16 28 H 0.38 -1.78 8.27 45.56 0.38 -1.41 16 29 H 0.12 -0.06 7.96 -51.93 -0.41 -0.47 16 30 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 31 H -0.25 -0.01 6.77 56.52 0.38 0.37 16 32 H 0.15 -0.09 6.31 -52.49 -0.33 -0.42 16 33 H 0.40 -0.22 7.83 -40.82 -0.32 -0.54 16 34 H 0.09 0.04 7.90 -51.93 -0.41 -0.37 16 35 H 0.08 0.22 8.14 -51.93 -0.42 -0.21 16 36 H 0.10 -0.37 8.07 -51.93 -0.42 -0.79 16 37 H 0.09 -0.14 7.85 -51.93 -0.41 -0.55 16 38 H 0.17 -0.50 8.06 -52.49 -0.42 -0.92 16 39 H 0.15 -0.11 8.06 -52.49 -0.42 -0.53 16 40 H 0.18 -0.08 8.06 -52.49 -0.42 -0.50 16 41 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 42 H 0.10 -0.33 8.10 -51.93 -0.42 -0.75 16 43 H 0.09 0.14 8.14 -51.93 -0.42 -0.28 16 44 H 0.10 0.28 7.40 -51.93 -0.38 -0.10 16 45 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 46 H 0.07 -0.03 8.12 -51.93 -0.42 -0.45 16 47 H 0.08 -0.14 8.11 -51.93 -0.42 -0.56 16 48 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 49 H 0.11 -0.26 5.68 -51.93 -0.29 -0.55 16 50 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 LS Contribution 400.88 15.07 6.04 6.04 Total: 0.00 -9.22 400.88 -12.10 -21.33 By element: Atomic # 1 Polarization: -4.20 SS G_CDS: -7.70 Total: -11.90 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -4.38 Total: -2.28 kcal Atomic # 7 Polarization: -2.79 SS G_CDS: -0.46 Total: -3.25 kcal Atomic # 8 Polarization: -3.05 SS G_CDS: -0.28 Total: -3.33 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.32 Total: -6.60 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -9.22 -12.10 -21.33 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_16915396.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.383 kcal (2) G-P(sol) polarization free energy of solvation -9.224 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 96.160 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.102 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.325 kcal (6) G-S(sol) free energy of system = (1) + (5) 84.058 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds