Wall clock time and date at job start Sun Mar 7 2021 04:36:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86305 * 109.46727 * 2 1 4 4 C 1.50702 * 109.47541 * 239.99909 * 2 1 3 5 5 C 1.38258 * 119.94378 * 299.99944 * 4 2 1 6 6 C 1.38143 * 120.05694 * 179.97438 * 5 4 2 7 7 C 1.38726 * 119.94127 * 0.02562 * 6 5 4 8 8 O 1.35907 * 120.05262 * 179.97438 * 7 6 5 9 9 C 1.42903 * 116.99663 * 179.97438 * 8 7 6 10 10 C 1.50700 * 109.46916 * 179.97438 * 9 8 7 11 11 O 1.21277 * 119.99882 * 359.97438 * 10 9 8 12 12 N 1.34776 * 120.00208 * 179.97438 * 10 9 8 13 13 C 1.46493 * 120.00517 * 179.97438 * 12 10 9 14 14 H 1.09005 * 112.84745 * 23.80541 * 13 12 10 15 15 C 1.53777 * 113.61721 * 154.99924 * 13 12 10 16 16 C 1.53786 * 87.08054 * 89.11825 * 15 13 12 17 17 H 1.09000 * 113.61459 * 270.80074 * 16 15 13 18 18 C 1.53005 * 113.61359 * 139.97989 * 16 15 13 19 19 N 1.46503 * 109.47104 * 176.52918 * 18 16 15 20 20 C 1.34939 * 126.03492 * 124.99889 * 19 18 16 21 21 C 1.35315 * 107.74580 * 179.97438 * 20 19 18 22 22 C 1.39870 * 107.92072 * 0.02562 * 21 20 19 23 23 N 1.30839 * 108.20307 * 359.97438 * 22 21 20 24 24 C 1.53784 * 87.17221 * 25.39240 * 16 15 13 25 25 C 1.38731 * 119.89191 * 0.27004 * 7 6 5 26 26 C 1.38148 * 119.94177 * 359.47220 * 25 7 6 27 27 H 0.96707 * 113.99914 * 60.00666 * 1 2 3 28 28 H 1.08998 * 109.46915 * 119.99643 * 2 1 3 29 29 H 1.48498 * 110.00200 * 298.67534 * 3 2 1 30 30 H 1.48498 * 109.99943 * 60.00121 * 3 2 1 31 31 H 1.08007 * 119.97121 * 359.97438 * 5 4 2 32 32 H 1.08000 * 120.02993 * 179.97438 * 6 5 4 33 33 H 1.08997 * 109.47443 * 60.00297 * 9 8 7 34 34 H 1.08998 * 109.47204 * 299.99753 * 9 8 7 35 35 H 0.97008 * 119.99695 * 0.02562 * 12 10 9 36 36 H 1.09001 * 113.61480 * 334.57141 * 15 13 12 37 37 H 1.08999 * 113.61640 * 203.66541 * 15 13 12 38 38 H 1.09003 * 109.46768 * 56.52938 * 18 16 15 39 39 H 1.09004 * 109.47031 * 296.53179 * 18 16 15 40 40 H 1.07999 * 126.13245 * 0.02562 * 20 19 18 41 41 H 1.07999 * 126.04347 * 179.73376 * 21 20 19 42 42 H 1.08001 * 125.90246 * 179.97438 * 22 21 20 43 43 H 1.08998 * 113.61606 * 89.15712 * 24 16 15 44 44 H 1.09000 * 113.61238 * 220.06445 * 24 16 15 45 45 H 1.08004 * 120.02915 * 179.72328 * 25 7 6 46 46 H 1.08001 * 119.97273 * 180.27846 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9315 -0.7104 -1.2304 5 6 1.5968 -2.0341 -1.4481 6 6 2.0557 -2.6874 -2.5754 7 6 2.8533 -2.0143 -3.4893 8 8 3.3064 -2.6550 -4.5989 9 6 4.1224 -1.8996 -5.4964 10 6 4.5280 -2.7686 -6.6589 11 8 4.1554 -3.9215 -6.7131 12 7 5.3049 -2.2648 -7.6382 13 6 5.6997 -3.1096 -8.7679 14 1 5.0138 -3.9402 -8.9353 15 6 6.0305 -2.3174 -10.0437 16 6 7.4768 -2.2408 -9.5268 17 1 7.6693 -1.3738 -8.8948 18 6 8.5296 -2.4233 -10.6219 19 7 9.8664 -2.2522 -10.0476 20 6 10.8805 -3.1396 -10.1189 21 6 11.9404 -2.6079 -9.4669 22 6 11.5607 -1.3529 -8.9799 23 7 10.3177 -1.1385 -9.3276 24 6 7.1815 -3.5262 -8.7359 25 6 3.1928 -0.6879 -3.2656 26 6 2.7270 -0.0375 -2.1393 27 1 -0.3933 0.4416 -0.7652 28 1 1.7923 -0.5138 0.8900 29 1 1.5879 2.4586 -1.2243 30 1 1.5614 2.4679 1.2085 31 1 0.9761 -2.5578 -0.7360 32 1 1.7943 -3.7216 -2.7448 33 1 5.0140 -1.5538 -4.9734 34 1 3.5603 -1.0408 -5.8632 35 1 5.6032 -1.3427 -7.5946 36 1 5.5340 -1.3484 -10.0970 37 1 5.9242 -2.8995 -10.9591 38 1 8.3724 -1.6807 -11.4043 39 1 8.4420 -3.4232 -11.0471 40 1 10.8519 -4.1014 -10.6093 41 1 12.9070 -3.0727 -9.3404 42 1 12.1856 -0.6774 -8.4145 43 1 7.3904 -4.4394 -9.2930 44 1 7.6128 -3.5318 -7.7349 45 1 3.8173 -0.1631 -3.9733 46 1 2.9872 0.9964 -1.9669 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:36:28 Heat of formation + Delta-G solvation = 40.904938 kcal Electronic energy + Delta-G solvation = -28284.270021 eV Core-core repulsion = 24144.101307 eV Total energy + Delta-G solvation = -4140.168714 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.13477 -41.65174 -41.05565 -39.73006 -38.82694 -37.21546 -35.17457 -33.59519 -32.40799 -31.77213 -31.02157 -29.90322 -28.37168 -26.96134 -26.26431 -24.57431 -23.91160 -22.55783 -22.07764 -21.83946 -21.65415 -20.33707 -19.54917 -18.58851 -18.33808 -18.07433 -17.54144 -17.24990 -16.87595 -16.55132 -16.40160 -16.16607 -15.88078 -15.59727 -15.48638 -15.45739 -14.94056 -14.68804 -14.62225 -14.35629 -14.32497 -14.03616 -13.77306 -13.71837 -13.62283 -13.51747 -13.43797 -12.94208 -12.40435 -12.26602 -12.18520 -12.12396 -11.80945 -11.64590 -11.61620 -11.48650 -10.98395 -10.59814 -10.33985 -10.24477 -10.06097 -9.49154 -9.24709 -4.98322 0.26548 0.27949 0.98354 1.27901 1.34510 1.39207 1.54890 1.57198 1.95203 1.96960 2.46582 2.63408 3.18939 3.28702 3.32058 3.36964 3.40269 3.57726 3.65488 3.70390 3.80896 3.83930 3.84841 3.86307 3.92644 4.00501 4.24498 4.25302 4.31111 4.41474 4.46126 4.46588 4.52288 4.59985 4.63060 4.64805 4.82190 4.82628 4.88895 4.93156 4.97082 5.12626 5.12785 5.22810 5.36316 5.48100 5.65683 5.74509 6.07359 6.16400 6.30866 6.40687 6.78851 7.00591 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.070 4.070 3 Si 0.682 3.318 4 C -0.155 4.155 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.519 3.481 11 O -0.510 6.510 12 N -0.711 5.711 13 C 0.124 3.876 14 H 0.109 0.891 15 C -0.137 4.137 16 C -0.123 4.123 17 H 0.105 0.895 18 C 0.142 3.858 19 N -0.370 5.370 20 C 0.053 3.947 21 C -0.275 4.275 22 C 0.044 3.956 23 N -0.297 5.297 24 C -0.146 4.146 25 C -0.206 4.206 26 C -0.075 4.075 27 H 0.376 0.624 28 H 0.118 0.882 29 H -0.261 1.261 30 H -0.257 1.257 31 H 0.135 0.865 32 H 0.136 0.864 33 H 0.096 0.904 34 H 0.096 0.904 35 H 0.404 0.596 36 H 0.081 0.919 37 H 0.101 0.899 38 H 0.087 0.913 39 H 0.098 0.902 40 H 0.172 0.828 41 H 0.147 0.853 42 H 0.182 0.818 43 H 0.093 0.907 44 H 0.073 0.927 45 H 0.132 0.868 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.829 2.230 -3.367 5.565 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.180 4.180 3 Si 0.583 3.417 4 C -0.156 4.156 5 C -0.069 4.069 6 C -0.164 4.164 7 C 0.089 3.911 8 O -0.200 6.200 9 C -0.039 4.039 10 C 0.304 3.696 11 O -0.383 6.383 12 N -0.364 5.364 13 C 0.018 3.982 14 H 0.127 0.873 15 C -0.175 4.175 16 C -0.142 4.142 17 H 0.123 0.877 18 C 0.021 3.979 19 N -0.153 5.153 20 C -0.094 4.094 21 C -0.304 4.304 22 C -0.142 4.142 23 N -0.119 5.119 24 C -0.185 4.185 25 C -0.225 4.225 26 C -0.092 4.092 27 H 0.223 0.777 28 H 0.136 0.864 29 H -0.186 1.186 30 H -0.182 1.182 31 H 0.153 0.847 32 H 0.154 0.846 33 H 0.114 0.886 34 H 0.114 0.886 35 H 0.238 0.762 36 H 0.099 0.901 37 H 0.120 0.880 38 H 0.105 0.895 39 H 0.116 0.884 40 H 0.189 0.811 41 H 0.165 0.835 42 H 0.199 0.801 43 H 0.112 0.888 44 H 0.092 0.908 45 H 0.149 0.851 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 2.254 2.485 -2.929 4.454 hybrid contribution 0.081 -0.087 -0.674 0.685 sum 2.335 2.398 -3.604 4.918 Atomic orbital electron populations 1.86601 1.17820 1.79923 1.49326 1.24958 0.83867 1.10759 0.98412 0.95113 0.91710 0.74634 0.80227 1.20202 1.01859 0.95498 0.98020 1.20861 0.96787 0.93419 0.95834 1.20535 1.00418 1.01283 0.94143 1.19079 0.94291 0.91086 0.86694 1.86173 1.64285 1.38578 1.30997 1.22458 0.96515 0.94467 0.90415 1.20037 0.78432 0.88098 0.83031 1.90789 1.53201 1.17537 1.76764 1.45471 1.52535 1.15709 1.22725 1.21830 0.96425 0.94455 0.85463 0.87336 1.23349 0.94771 1.01712 0.97687 1.22981 0.93673 1.00077 0.97508 0.87685 1.21783 0.77438 1.03236 0.95441 1.48702 1.10784 1.13273 1.42515 1.22595 0.88671 0.96626 1.01465 1.21560 1.01113 0.98084 1.09691 1.23922 0.93104 0.97197 0.99965 1.77308 1.13330 1.07289 1.13958 1.23550 0.95937 0.97474 1.01507 1.21172 1.06205 0.94216 1.00906 1.20786 0.96078 0.99223 0.93158 0.77673 0.86415 1.18586 1.18229 0.84727 0.84623 0.88568 0.88645 0.76172 0.90064 0.88011 0.89505 0.88381 0.81056 0.83543 0.80075 0.88816 0.90824 0.85056 0.85242 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.69 12.77 -35.23 -0.45 -1.14 16 2 C -0.07 0.02 2.82 36.01 0.10 0.12 16 3 Si 0.68 -0.72 29.78 -169.99 -5.06 -5.78 16 4 C -0.16 -0.03 5.39 -104.60 -0.56 -0.60 16 5 C -0.05 -0.05 9.60 -39.61 -0.38 -0.43 16 6 C -0.15 -0.24 9.99 -39.44 -0.39 -0.64 16 7 C 0.13 0.22 6.69 -39.22 -0.26 -0.04 16 8 O -0.29 -0.77 9.67 -39.36 -0.38 -1.15 16 9 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 10 C 0.52 0.56 7.91 -10.99 -0.09 0.48 16 11 O -0.51 -3.08 16.10 -14.35 -0.23 -3.32 16 12 N -0.71 1.40 5.26 -52.93 -0.28 1.13 16 13 C 0.12 -0.22 4.33 -67.03 -0.29 -0.51 16 14 H 0.11 0.00 7.46 -51.93 -0.39 -0.39 16 15 C -0.14 0.55 7.39 -25.92 -0.19 0.36 16 16 C -0.12 0.36 3.73 -89.80 -0.33 0.02 16 17 H 0.10 -0.16 7.99 -51.93 -0.41 -0.57 16 18 C 0.14 -0.37 6.33 -4.04 -0.03 -0.40 16 19 N -0.37 -0.15 3.68 -61.36 -0.23 -0.38 16 20 C 0.05 -0.01 11.45 -17.23 -0.20 -0.21 16 21 C -0.28 -0.14 10.80 -40.01 -0.43 -0.57 16 22 C 0.04 0.06 12.03 -17.36 -0.21 -0.15 16 23 N -0.30 -0.75 12.29 30.63 0.38 -0.38 16 24 C -0.15 0.28 7.44 -25.82 -0.19 0.09 16 25 C -0.21 0.08 9.04 -39.43 -0.36 -0.27 16 26 C -0.07 0.04 8.66 -39.60 -0.34 -0.30 16 27 H 0.38 -0.54 8.70 45.56 0.40 -0.15 16 28 H 0.12 -0.10 7.96 -51.93 -0.41 -0.52 16 29 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 30 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 31 H 0.13 0.01 8.06 -52.48 -0.42 -0.41 16 32 H 0.14 0.17 8.06 -52.49 -0.42 -0.25 16 33 H 0.10 -0.34 7.65 -51.93 -0.40 -0.74 16 34 H 0.10 -0.35 7.68 -51.93 -0.40 -0.75 16 35 H 0.40 -1.89 8.70 -40.82 -0.36 -2.25 16 36 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 37 H 0.10 -0.52 8.10 -51.93 -0.42 -0.94 16 38 H 0.09 -0.25 8.14 -51.93 -0.42 -0.68 16 39 H 0.10 -0.46 7.80 -51.93 -0.41 -0.87 16 40 H 0.17 -0.58 8.06 -52.49 -0.42 -1.01 16 41 H 0.15 -0.17 8.06 -52.49 -0.42 -0.59 16 42 H 0.18 -0.23 8.06 -52.49 -0.42 -0.65 16 43 H 0.09 -0.25 7.92 -51.93 -0.41 -0.66 16 44 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 45 H 0.13 -0.41 6.30 -52.48 -0.33 -0.74 16 46 H 0.13 -0.33 4.87 -52.49 -0.26 -0.58 16 LS Contribution 388.43 15.07 5.85 5.85 Total: 0.00 -11.30 388.43 -10.74 -22.04 By element: Atomic # 1 Polarization: -7.59 SS G_CDS: -6.37 Total: -13.96 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: -3.97 Total: -2.91 kcal Atomic # 7 Polarization: 0.50 SS G_CDS: -0.13 Total: 0.37 kcal Atomic # 8 Polarization: -4.55 SS G_CDS: -1.06 Total: -5.61 kcal Atomic # 14 Polarization: -0.72 SS G_CDS: -5.06 Total: -5.78 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -11.30 -10.74 -22.04 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.950 kcal (2) G-P(sol) polarization free energy of solvation -11.303 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.647 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.742 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.045 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.905 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds