Wall clock time and date at job start Sun Mar 7 2021 04:36:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.47079 * 2 1 4 4 C 1.50696 * 109.46833 * 120.00142 * 2 1 3 5 5 C 1.38247 * 119.96984 * 245.02132 * 4 2 1 6 6 C 1.38292 * 120.11271 * 180.02562 * 5 4 2 7 7 C 1.38121 * 120.05156 * 359.67474 * 6 5 4 8 8 C 1.38756 * 119.94383 * 0.59933 * 7 6 5 9 9 O 1.35910 * 120.05354 * 179.70061 * 8 7 6 10 10 C 1.42895 * 116.99913 * 359.72563 * 9 8 7 11 11 C 1.53000 * 109.46880 * 179.97438 * 10 9 8 12 12 C 1.50703 * 109.47332 * 180.02562 * 11 10 9 13 13 O 1.21286 * 119.99513 * 0.02562 * 12 11 10 14 14 N 1.34769 * 120.00205 * 179.97438 * 12 11 10 15 15 C 1.46501 * 120.00014 * 179.97438 * 14 12 11 16 16 H 1.09004 * 112.85074 * 336.20143 * 15 14 12 17 17 C 1.53782 * 113.61142 * 107.50467 * 15 14 12 18 18 C 1.53962 * 87.11063 * 89.18830 * 17 15 14 19 19 H 1.08993 * 113.61598 * 270.84305 * 18 17 15 20 20 C 1.52999 * 113.66529 * 139.88900 * 18 17 15 21 21 N 1.46494 * 109.47391 * 87.55384 * 20 18 17 22 22 C 1.34948 * 126.04143 * 124.99918 * 21 20 18 23 23 C 1.35319 * 107.74754 * 179.97438 * 22 21 20 24 24 C 1.39867 * 107.91928 * 359.97438 * 23 22 21 25 25 N 1.30835 * 108.20571 * 359.73998 * 24 23 22 26 26 C 1.53781 * 113.61619 * 205.00312 * 15 14 12 27 27 C 1.38164 * 119.97350 * 65.00173 * 4 2 1 28 28 H 0.96702 * 114.00115 * 300.00283 * 1 2 3 29 29 H 1.08996 * 109.46916 * 239.99946 * 2 1 3 30 30 H 1.48507 * 109.99928 * 178.68021 * 3 2 1 31 31 H 1.48500 * 110.00132 * 300.00058 * 3 2 1 32 32 H 1.07998 * 119.94682 * 359.97438 * 5 4 2 33 33 H 1.07993 * 119.97543 * 179.97438 * 6 5 4 34 34 H 1.07996 * 120.03109 * 180.32684 * 7 6 5 35 35 H 1.08999 * 109.47305 * 60.00000 * 10 9 8 36 36 H 1.08996 * 109.47434 * 299.99695 * 10 9 8 37 37 H 1.08999 * 109.47114 * 59.99928 * 11 10 9 38 38 H 1.09003 * 109.47265 * 299.99994 * 11 10 9 39 39 H 0.97001 * 120.00013 * 0.02562 * 14 12 11 40 40 H 1.08997 * 113.61668 * 203.66381 * 17 15 14 41 41 H 1.08998 * 113.61674 * 334.48890 * 17 15 14 42 42 H 1.09002 * 109.47053 * 207.55709 * 20 18 17 43 43 H 1.09004 * 109.47121 * 327.55345 * 20 18 17 44 44 H 1.07995 * 126.12303 * 359.94867 * 22 21 20 45 45 H 1.07993 * 126.03946 * 179.97438 * 23 22 21 46 46 H 1.08001 * 125.89818 * 180.02562 * 24 23 22 47 47 H 1.09002 * 113.61445 * 25.43587 * 26 15 14 48 48 H 1.09002 * 113.61408 * 156.25317 * 26 15 14 49 49 H 1.07993 * 120.03206 * 0.03990 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6382 -0.0116 2.1912 6 6 3.1010 -0.6607 3.3212 7 6 2.8519 -2.0080 3.4958 8 6 2.1474 -2.7129 2.5302 9 8 1.9063 -4.0400 2.6968 10 6 2.4125 -4.6469 3.8874 11 6 2.0450 -6.1320 3.8987 12 6 2.5783 -6.7720 5.1545 13 8 3.1915 -6.1056 5.9614 14 7 2.3730 -8.0844 5.3816 15 6 2.8919 -8.7067 6.6022 16 1 3.7378 -8.1656 7.0264 17 6 1.8008 -9.0513 7.6296 18 6 1.6779 -10.4150 6.9255 19 1 0.9594 -10.4200 6.1059 20 6 1.4908 -11.5889 7.8887 21 7 0.0643 -11.7664 8.1710 22 6 -0.6423 -12.9041 8.0050 23 6 -1.9191 -12.6546 8.3772 24 6 -1.9953 -11.3189 8.7852 25 7 -0.8057 -10.7871 8.6677 26 6 3.1331 -10.2195 6.4679 27 6 1.6844 -2.0595 1.3976 28 1 -0.3933 0.4417 0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 3.5346 1.7703 0.0321 31 1 1.5615 2.4679 -1.2085 32 1 2.8302 1.0429 2.0586 33 1 3.6534 -0.1127 4.0701 34 1 3.2088 -2.5134 4.3809 35 1 1.9757 -4.1582 4.7583 36 1 3.4969 -4.5403 3.9168 37 1 2.4815 -6.6209 3.0278 38 1 0.9606 -6.2383 3.8695 39 1 1.8822 -8.6173 4.7365 40 1 2.1707 -9.1214 8.6525 41 1 0.9086 -8.4312 7.5438 42 1 1.8874 -12.4975 7.4356 43 1 2.0224 -11.3845 8.8181 44 1 -0.2577 -13.8449 7.6400 45 1 -2.7351 -13.3618 8.3620 46 1 -2.8819 -10.8149 9.1407 47 1 3.3158 -10.5433 5.4432 48 1 3.8683 -10.6086 7.1722 49 1 1.1324 -2.6051 0.6467 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:36:36 Heat of formation + Delta-G solvation = 30.931623 kcal Electronic energy + Delta-G solvation = -29911.736261 eV Core-core repulsion = 25615.597453 eV Total energy + Delta-G solvation = -4296.138808 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.10298 -41.47681 -41.10691 -39.68222 -38.98121 -37.22444 -35.13281 -33.76420 -33.00137 -32.41948 -30.98696 -30.75916 -28.66533 -27.00971 -26.86589 -25.65521 -24.10229 -23.62961 -22.21849 -21.94600 -21.67011 -21.48560 -20.43202 -19.34449 -18.37486 -18.06812 -17.68133 -17.49974 -17.13700 -17.07730 -16.79908 -16.45482 -16.21027 -16.01474 -15.79594 -15.36887 -15.18161 -14.99679 -14.87486 -14.69088 -14.49033 -14.28666 -14.17208 -14.07189 -13.75273 -13.61611 -13.52037 -13.22692 -13.02632 -12.88283 -12.80524 -12.37597 -12.32781 -11.94576 -11.80198 -11.76969 -11.59181 -11.58734 -11.37028 -11.03947 -10.45325 -10.32326 -10.17900 -9.88523 -9.49595 -9.20396 -5.00447 0.25797 0.44978 0.99657 1.29727 1.46774 1.56425 1.64265 1.67284 1.98328 1.99387 2.42308 2.72058 3.16037 3.29286 3.47078 3.49217 3.50647 3.62262 3.67575 3.80787 3.83364 3.89996 3.91684 3.93033 4.02896 4.08264 4.21620 4.23674 4.28199 4.28698 4.34669 4.48954 4.52434 4.56639 4.57653 4.60866 4.66737 4.70846 4.72461 4.83683 4.90340 4.98479 5.01387 5.02711 5.13261 5.30681 5.41937 5.43968 5.48294 5.72461 5.75998 6.08452 6.28865 6.40658 6.58950 6.81376 7.05066 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.069 4.069 3 Si 0.691 3.309 4 C -0.083 4.083 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.316 6.316 10 C 0.075 3.925 11 C -0.142 4.142 12 C 0.524 3.476 13 O -0.535 6.535 14 N -0.711 5.711 15 C 0.117 3.883 16 H 0.107 0.893 17 C -0.133 4.133 18 C -0.122 4.122 19 H 0.095 0.905 20 C 0.142 3.858 21 N -0.372 5.372 22 C 0.049 3.951 23 C -0.274 4.274 24 C 0.042 3.958 25 N -0.290 5.290 26 C -0.138 4.138 27 C -0.125 4.125 28 H 0.380 0.620 29 H 0.114 0.886 30 H -0.258 1.258 31 H -0.255 1.255 32 H 0.129 0.871 33 H 0.131 0.869 34 H 0.133 0.867 35 H 0.073 0.927 36 H 0.073 0.927 37 H 0.107 0.893 38 H 0.108 0.892 39 H 0.403 0.597 40 H 0.093 0.907 41 H 0.076 0.924 42 H 0.098 0.902 43 H 0.087 0.913 44 H 0.172 0.828 45 H 0.147 0.853 46 H 0.182 0.818 47 H 0.079 0.921 48 H 0.101 0.899 49 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.268 -3.919 0.888 4.027 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.180 4.180 3 Si 0.592 3.408 4 C -0.083 4.083 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.182 4.182 12 C 0.311 3.689 13 O -0.412 6.412 14 N -0.363 5.363 15 C 0.012 3.988 16 H 0.125 0.875 17 C -0.172 4.172 18 C -0.141 4.141 19 H 0.113 0.887 20 C 0.021 3.979 21 N -0.155 5.155 22 C -0.096 4.096 23 C -0.304 4.304 24 C -0.145 4.145 25 N -0.111 5.111 26 C -0.176 4.176 27 C -0.144 4.144 28 H 0.227 0.773 29 H 0.132 0.868 30 H -0.182 1.182 31 H -0.180 1.180 32 H 0.146 0.854 33 H 0.149 0.851 34 H 0.150 0.850 35 H 0.092 0.908 36 H 0.091 0.909 37 H 0.126 0.874 38 H 0.126 0.874 39 H 0.238 0.762 40 H 0.111 0.889 41 H 0.095 0.905 42 H 0.116 0.884 43 H 0.105 0.895 44 H 0.189 0.811 45 H 0.164 0.836 46 H 0.199 0.801 47 H 0.097 0.903 48 H 0.119 0.881 49 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 2.055 -2.222 0.488 3.066 hybrid contribution -0.615 -1.915 -0.318 2.036 sum 1.440 -4.137 0.171 4.384 Atomic orbital electron populations 1.86513 1.16938 1.81733 1.49224 1.25105 0.85352 1.10230 0.97302 0.94642 0.81106 0.77908 0.87096 1.20126 0.97998 0.93701 0.96487 1.20909 1.01607 0.99457 0.95182 1.20934 0.97497 0.93706 0.96973 1.21397 1.04212 0.95991 1.00481 1.18964 0.95170 0.82637 0.94518 1.85976 1.74474 1.20288 1.42283 1.22408 0.99671 0.91766 0.86235 1.21468 1.04329 0.95128 0.97230 1.20290 0.79290 0.81977 0.87392 1.90756 1.40686 1.62216 1.47516 1.45611 1.57850 1.09644 1.23164 1.21862 0.97848 0.93400 0.85698 0.87505 1.23426 0.99526 0.95625 0.98602 1.22931 0.97583 0.94970 0.98601 0.88713 1.21780 0.76274 0.99968 0.99916 1.48741 1.08844 1.07849 1.50034 1.22608 0.92935 0.92203 1.01900 1.21559 0.97359 0.97868 1.13585 1.23952 0.96185 0.94374 0.99944 1.77398 1.00606 1.13648 1.19469 1.23353 0.96164 0.95199 1.02906 1.20241 1.03211 0.93713 0.97242 0.77312 0.86814 1.18235 1.17965 0.85415 0.85118 0.84962 0.90844 0.90912 0.87431 0.87397 0.76248 0.88889 0.90532 0.88412 0.89451 0.81066 0.83567 0.80113 0.90278 0.88087 0.84888 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.49 12.83 -35.23 -0.45 -0.94 16 2 C -0.07 -0.03 2.80 36.00 0.10 0.07 16 3 Si 0.69 -0.41 29.80 -169.99 -5.07 -5.48 16 4 C -0.08 -0.10 5.35 -104.65 -0.56 -0.66 16 5 C -0.15 -0.05 8.67 -39.56 -0.34 -0.39 16 6 C -0.07 -0.04 10.04 -39.60 -0.40 -0.44 16 7 C -0.20 -0.31 9.04 -39.43 -0.36 -0.67 16 8 C 0.13 0.33 6.69 -39.22 -0.26 0.07 16 9 O -0.32 -0.70 10.14 -19.46 -0.20 -0.90 16 10 C 0.07 0.05 4.03 37.16 0.15 0.19 16 11 C -0.14 0.21 6.07 -27.88 -0.17 0.04 16 12 C 0.52 0.26 7.83 -10.99 -0.09 0.17 16 13 O -0.54 -2.38 15.58 5.55 0.09 -2.30 16 14 N -0.71 1.21 5.26 -53.01 -0.28 0.93 16 15 C 0.12 -0.16 4.32 -67.12 -0.29 -0.45 16 16 H 0.11 0.03 7.47 -51.93 -0.39 -0.35 16 17 C -0.13 0.11 7.44 -25.82 -0.19 -0.08 16 18 C -0.12 0.31 3.72 -89.71 -0.33 -0.02 16 19 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 20 C 0.14 -0.34 6.35 -4.05 -0.03 -0.36 16 21 N -0.37 -0.23 3.68 -61.37 -0.23 -0.45 16 22 C 0.05 -0.01 11.45 -17.22 -0.20 -0.21 16 23 C -0.27 -0.16 10.80 -40.01 -0.43 -0.60 16 24 C 0.04 0.07 12.02 -17.37 -0.21 -0.14 16 25 N -0.29 -0.85 12.42 30.62 0.38 -0.47 16 26 C -0.14 0.52 7.38 -25.92 -0.19 0.33 16 27 C -0.13 -0.30 9.62 -39.43 -0.38 -0.67 16 28 H 0.38 -1.12 8.70 45.56 0.40 -0.73 16 29 H 0.11 0.09 7.96 -51.93 -0.41 -0.32 16 30 H -0.26 -0.46 7.11 56.52 0.40 -0.06 16 31 H -0.25 -0.65 7.11 56.52 0.40 -0.25 16 32 H 0.13 -0.23 4.90 -52.49 -0.26 -0.48 16 33 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 34 H 0.13 0.08 6.30 -52.49 -0.33 -0.25 16 35 H 0.07 0.07 7.61 -51.93 -0.39 -0.32 16 36 H 0.07 0.06 7.63 -51.93 -0.40 -0.33 16 37 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 38 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 39 H 0.40 -1.63 8.70 -40.82 -0.36 -1.99 16 40 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 41 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 42 H 0.10 -0.46 8.07 -51.93 -0.42 -0.88 16 43 H 0.09 -0.22 7.85 -51.93 -0.41 -0.63 16 44 H 0.17 -0.60 8.06 -52.49 -0.42 -1.02 16 45 H 0.15 -0.16 8.06 -52.49 -0.42 -0.58 16 46 H 0.18 -0.14 8.06 -52.49 -0.42 -0.57 16 47 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 48 H 0.10 -0.47 8.10 -51.93 -0.42 -0.89 16 49 H 0.13 0.30 8.06 -52.49 -0.42 -0.12 16 LS Contribution 409.74 15.07 6.17 6.17 Total: 0.00 -10.29 409.74 -10.97 -21.27 By element: Atomic # 1 Polarization: -6.79 SS G_CDS: -7.22 Total: -14.01 kcal Atomic # 6 Polarization: 0.35 SS G_CDS: -4.17 Total: -3.82 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: -0.12 Total: 0.00 kcal Atomic # 8 Polarization: -3.58 SS G_CDS: -0.56 Total: -4.14 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: -5.07 Total: -5.48 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -10.29 -10.97 -21.27 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.200 kcal (2) G-P(sol) polarization free energy of solvation -10.294 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 41.906 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.975 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.268 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.932 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds