Wall clock time and date at job start Sun Mar 7 2021 04:37:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.38239 * 119.94937 * 64.99931 * 4 2 1 6 6 C 1.38165 * 120.05713 * 179.97438 * 5 4 2 7 7 N 1.48006 * 120.02491 * 180.02562 * 6 5 4 8 8 O 1.21792 * 120.00408 * 0.02562 * 7 6 5 9 9 O 1.21799 * 119.99520 * 179.97438 * 7 6 5 10 10 C 1.38709 * 119.94666 * 359.97438 * 6 5 4 11 11 O 1.35898 * 120.05865 * 179.97438 * 10 6 5 12 12 C 1.42893 * 116.99893 * 179.97438 * 11 10 6 13 13 C 1.50701 * 109.46981 * 180.02562 * 12 11 10 14 14 O 1.21282 * 120.00040 * 359.97438 * 13 12 11 15 15 N 1.34775 * 120.00275 * 180.02562 * 13 12 11 16 16 C 1.46502 * 120.00246 * 180.02562 * 15 13 12 17 17 H 1.08998 * 112.84670 * 336.19527 * 16 15 13 18 18 C 1.53776 * 113.61397 * 107.49951 * 16 15 13 19 19 C 1.53775 * 87.08246 * 89.11756 * 18 16 15 20 20 H 1.09006 * 113.69464 * 270.87224 * 19 18 16 21 21 C 1.52998 * 113.62006 * 139.97968 * 19 18 16 22 22 N 1.46501 * 109.47280 * 87.50160 * 21 19 18 23 23 C 1.34946 * 126.04153 * 124.71895 * 22 21 19 24 24 C 1.35313 * 107.74688 * 179.84013 * 23 22 21 25 25 C 1.39864 * 107.92124 * 0.42511 * 24 23 22 26 26 N 1.30838 * 108.20241 * 359.73499 * 25 24 23 27 27 C 1.53776 * 113.61305 * 204.99779 * 16 15 13 28 28 C 1.38753 * 119.88467 * 0.02562 * 10 6 5 29 29 C 1.38126 * 119.94878 * 359.72444 * 28 10 6 30 30 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 31 31 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 32 32 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 33 33 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 34 34 H 1.08008 * 119.96883 * 359.97438 * 5 4 2 35 35 H 1.08997 * 109.47793 * 299.99863 * 12 11 10 36 36 H 1.09001 * 109.47202 * 60.00725 * 12 11 10 37 37 H 0.96999 * 120.00140 * 359.97438 * 15 13 12 38 38 H 1.09005 * 113.61290 * 203.66604 * 18 16 15 39 39 H 1.08998 * 113.61690 * 334.56919 * 18 16 15 40 40 H 1.09001 * 109.47654 * 207.50828 * 21 19 18 41 41 H 1.09005 * 109.46783 * 327.50661 * 21 19 18 42 42 H 1.08003 * 126.11985 * 0.02562 * 23 22 21 43 43 H 1.08006 * 126.03528 * 180.16237 * 24 23 22 44 44 H 1.07997 * 125.89572 * 179.71449 * 25 24 23 45 45 H 1.09001 * 113.61796 * 25.43464 * 27 16 15 46 46 H 1.09004 * 113.61020 * 156.33469 * 27 16 15 47 47 H 1.08000 * 120.02843 * 179.97438 * 28 10 6 48 48 H 1.07992 * 119.97357 * 180.27028 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 1.6841 -2.0604 1.3970 6 6 2.1441 -2.7142 2.5239 7 7 1.8795 -4.1595 2.7014 8 8 1.2564 -4.7732 1.8537 9 8 2.2856 -4.7354 3.6948 10 6 2.8549 -2.0151 3.4883 11 8 3.3080 -2.6558 4.5978 12 6 4.0330 -1.8730 5.5483 13 6 4.4527 -2.7463 6.7026 14 8 4.1593 -3.9231 6.7106 15 7 5.1531 -2.2195 7.7264 16 6 5.5616 -3.0686 8.8482 17 1 4.9297 -3.9491 8.9645 18 6 7.0670 -3.3814 8.8677 19 6 7.2421 -2.1022 9.7030 20 1 7.3979 -1.2054 9.1033 21 6 8.2612 -2.2441 10.8353 22 7 9.5996 -1.9284 10.3301 23 6 10.4421 -1.0041 10.8371 24 6 11.5716 -1.0230 10.0923 25 6 11.4103 -1.9852 9.0901 26 7 10.2286 -2.5286 9.2317 27 6 5.7855 -2.2938 10.1575 28 6 3.1018 -0.6603 3.3186 29 6 2.6443 -0.0123 2.1878 30 1 -0.3934 0.4418 -0.7650 31 1 1.7923 -0.5137 -0.8901 32 1 1.5616 2.4678 1.2086 33 1 3.5346 1.7703 -0.0322 34 1 1.1309 -2.6044 0.6456 35 1 4.9179 -1.4509 5.0721 36 1 3.3979 -1.0665 5.9148 37 1 5.3874 -1.2782 7.7202 38 1 7.3164 -4.2940 9.4092 39 1 7.5367 -3.3291 7.8855 40 1 8.0060 -1.5571 11.6422 41 1 8.2466 -3.2672 11.2111 42 1 10.2502 -0.3660 11.6870 43 1 12.4421 -0.4016 10.2425 44 1 12.1358 -2.2360 8.3304 45 1 5.2205 -1.3636 10.2166 46 1 5.6845 -2.9091 11.0516 47 1 3.6546 -0.1136 4.0682 48 1 2.8399 1.0412 2.0533 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:37:07 Heat of formation + Delta-G solvation = 51.600469 kcal Electronic energy + Delta-G solvation = -34985.958923 eV Core-core repulsion = 30015.237567 eV Total energy + Delta-G solvation = -4970.721356 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.151 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -43.02732 -42.14256 -41.79372 -41.18463 -39.95955 -39.04362 -37.56829 -37.12660 -35.18637 -33.71073 -33.45807 -32.49525 -31.02461 -30.20300 -28.45886 -27.60251 -26.89423 -26.68426 -24.65414 -23.94213 -22.74543 -22.10278 -21.96289 -21.64864 -20.56784 -20.33283 -19.48352 -19.12808 -18.72561 -18.57844 -18.31780 -18.17323 -17.69435 -17.56842 -17.03336 -16.65689 -16.50036 -16.14738 -15.95136 -15.69442 -15.56303 -15.28214 -15.04349 -14.91623 -14.61845 -14.46775 -14.42936 -14.14912 -13.88675 -13.78671 -13.65155 -13.54561 -13.06545 -13.01666 -12.84711 -12.51711 -12.38203 -12.21103 -12.19864 -11.80987 -11.79411 -11.73143 -11.61225 -11.39835 -11.01612 -10.94390 -10.62957 -10.35143 -10.23485 -9.90901 -9.52305 -5.23429 -1.14284 -0.38944 0.37511 0.52258 0.97014 0.98567 1.04533 1.36449 1.37638 1.54001 1.64828 1.90307 1.95573 2.14333 2.88345 3.00073 3.08489 3.13395 3.25599 3.33507 3.43637 3.47522 3.52235 3.52907 3.55160 3.67069 3.72038 3.87396 3.90403 4.00044 4.03635 4.13257 4.19153 4.26164 4.27303 4.39139 4.46224 4.55703 4.62920 4.66856 4.67975 4.80094 4.87271 4.90339 4.93218 5.01342 5.10524 5.35363 5.44817 5.69699 5.73301 6.05853 6.19980 6.37965 6.78861 6.94670 6.99209 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.071 4.071 3 Si 0.691 3.309 4 C -0.111 4.111 5 C 0.013 3.987 6 C -0.074 4.074 7 N 0.029 4.971 8 O -0.175 6.175 9 O -0.117 6.117 10 C 0.200 3.800 11 O -0.252 6.252 12 C 0.031 3.969 13 C 0.517 3.483 14 O -0.492 6.492 15 N -0.711 5.711 16 C 0.120 3.880 17 H 0.110 0.890 18 C -0.133 4.133 19 C -0.122 4.122 20 H 0.094 0.906 21 C 0.141 3.859 22 N -0.372 5.372 23 C 0.049 3.951 24 C -0.274 4.274 25 C 0.041 3.959 26 N -0.289 5.289 27 C -0.136 4.136 28 C -0.208 4.208 29 C -0.031 4.031 30 H 0.388 0.612 31 H 0.082 0.918 32 H -0.248 1.248 33 H -0.251 1.251 34 H 0.166 0.834 35 H 0.101 0.899 36 H 0.102 0.898 37 H 0.401 0.599 38 H 0.095 0.905 39 H 0.076 0.924 40 H 0.098 0.902 41 H 0.088 0.912 42 H 0.172 0.828 43 H 0.147 0.853 44 H 0.182 0.818 45 H 0.079 0.921 46 H 0.102 0.898 47 H 0.156 0.844 48 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.146 12.092 0.571 12.294 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.181 4.181 3 Si 0.591 3.409 4 C -0.112 4.112 5 C -0.006 4.006 6 C -0.158 4.158 7 N 0.549 4.451 8 O -0.384 6.384 9 O -0.341 6.341 10 C 0.150 3.850 11 O -0.161 6.161 12 C -0.048 4.048 13 C 0.301 3.699 14 O -0.363 6.363 15 N -0.364 5.364 16 C 0.015 3.985 17 H 0.128 0.872 18 C -0.172 4.172 19 C -0.141 4.141 20 H 0.112 0.888 21 C 0.020 3.980 22 N -0.155 5.155 23 C -0.097 4.097 24 C -0.304 4.304 25 C -0.145 4.145 26 N -0.111 5.111 27 C -0.175 4.175 28 C -0.227 4.227 29 C -0.049 4.049 30 H 0.236 0.764 31 H 0.100 0.900 32 H -0.172 1.172 33 H -0.176 1.176 34 H 0.184 0.816 35 H 0.119 0.881 36 H 0.120 0.880 37 H 0.235 0.765 38 H 0.113 0.887 39 H 0.095 0.905 40 H 0.116 0.884 41 H 0.106 0.894 42 H 0.189 0.811 43 H 0.164 0.836 44 H 0.199 0.801 45 H 0.097 0.903 46 H 0.121 0.879 47 H 0.173 0.827 48 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 1.598 11.061 1.095 11.229 hybrid contribution 0.925 0.612 0.597 1.260 sum 2.523 11.673 1.692 12.062 Atomic orbital electron populations 1.86497 1.16671 1.81989 1.50018 1.24644 0.86292 1.10681 0.96500 0.94657 0.80820 0.77596 0.87834 1.19231 1.01842 0.92780 0.97383 1.20817 0.92147 0.93787 0.93881 1.20568 1.12622 0.82637 0.99995 1.43297 0.99010 1.02332 1.00413 1.94548 1.39531 1.66149 1.38154 1.94699 1.51904 1.69042 1.18454 1.18645 0.89953 0.90720 0.85634 1.86500 1.66738 1.35507 1.27358 1.22720 0.97945 0.94385 0.89742 1.19775 0.78726 0.88521 0.82912 1.90870 1.52500 1.15650 1.77309 1.45426 1.56959 1.13175 1.20888 1.21876 0.96734 0.94738 0.85138 0.87214 1.23408 0.94986 0.97376 1.01419 1.22912 0.93835 1.00185 0.97171 0.88794 1.21793 0.77203 1.02951 0.96036 1.48749 1.13914 1.29130 1.23675 1.22607 0.91570 0.95019 1.00459 1.21560 1.00846 1.06990 1.00997 1.23952 0.94977 0.95980 0.99584 1.77406 1.08797 1.20854 1.04009 1.23361 0.94912 1.01518 0.97722 1.21205 1.07763 0.92196 1.01512 1.21139 0.92551 0.99680 0.91490 0.76398 0.89965 1.17214 1.17561 0.81634 0.88074 0.88036 0.76468 0.88679 0.90497 0.88405 0.89358 0.81066 0.83572 0.80130 0.90263 0.87910 0.82658 0.84236 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.84 12.81 -35.23 -0.45 0.39 16 2 C -0.07 0.16 2.79 36.00 0.10 0.26 16 3 Si 0.69 -2.50 29.84 -169.99 -5.07 -7.57 16 4 C -0.11 -0.03 5.39 -104.60 -0.56 -0.59 16 5 C 0.01 0.02 9.19 -39.61 -0.36 -0.34 16 6 C -0.07 -0.30 6.87 -79.81 -0.55 -0.85 16 7 N 0.03 0.21 4.45 34.03 0.15 0.37 16 8 O -0.17 -1.36 18.45 -29.46 -0.54 -1.91 16 9 O -0.12 -1.09 17.24 -36.49 -0.63 -1.72 16 10 C 0.20 0.45 6.67 -39.22 -0.26 0.19 16 11 O -0.25 -0.84 7.68 -49.78 -0.38 -1.22 16 12 C 0.03 -0.04 5.22 36.01 0.19 0.15 16 13 C 0.52 0.69 7.91 -10.99 -0.09 0.60 16 14 O -0.49 -3.36 16.10 -14.36 -0.23 -3.59 16 15 N -0.71 1.37 5.26 -53.02 -0.28 1.09 16 16 C 0.12 -0.16 4.32 -67.12 -0.29 -0.45 16 17 H 0.11 0.08 7.46 -51.93 -0.39 -0.31 16 18 C -0.13 0.11 7.43 -25.92 -0.19 -0.08 16 19 C -0.12 0.35 3.70 -89.81 -0.33 0.02 16 20 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 21 C 0.14 -0.36 6.35 -4.04 -0.03 -0.39 16 22 N -0.37 -0.17 3.68 -61.36 -0.23 -0.39 16 23 C 0.05 -0.02 11.45 -17.23 -0.20 -0.22 16 24 C -0.27 -0.12 10.80 -40.02 -0.43 -0.55 16 25 C 0.04 0.06 12.03 -17.37 -0.21 -0.15 16 26 N -0.29 -0.82 12.42 30.62 0.38 -0.44 16 27 C -0.14 0.54 7.39 -25.92 -0.19 0.35 16 28 C -0.21 0.22 9.04 -39.43 -0.36 -0.13 16 29 C -0.03 0.02 8.66 -39.60 -0.34 -0.32 16 30 H 0.39 -2.52 8.74 45.56 0.40 -2.12 16 31 H 0.08 -0.31 7.96 -51.93 -0.41 -0.73 16 32 H -0.25 0.24 7.05 56.52 0.40 0.64 16 33 H -0.25 0.38 7.11 56.52 0.40 0.78 16 34 H 0.17 0.21 7.61 -52.48 -0.40 -0.19 16 35 H 0.10 -0.45 7.67 -51.93 -0.40 -0.84 16 36 H 0.10 -0.47 7.66 -51.93 -0.40 -0.87 16 37 H 0.40 -2.03 8.70 -40.82 -0.36 -2.39 16 38 H 0.09 -0.06 7.90 -51.93 -0.41 -0.47 16 39 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 40 H 0.10 -0.48 8.07 -51.93 -0.42 -0.90 16 41 H 0.09 -0.23 7.84 -51.93 -0.41 -0.64 16 42 H 0.17 -0.63 8.06 -52.48 -0.42 -1.06 16 43 H 0.15 -0.19 8.06 -52.48 -0.42 -0.61 16 44 H 0.18 -0.15 8.06 -52.49 -0.42 -0.58 16 45 H 0.08 -0.37 8.14 -51.93 -0.42 -0.80 16 46 H 0.10 -0.49 8.10 -51.93 -0.42 -0.91 16 47 H 0.16 -0.74 6.30 -52.49 -0.33 -1.07 16 48 H 0.14 -0.34 4.86 -52.49 -0.26 -0.59 16 LS Contribution 414.76 15.07 6.25 6.25 Total: 0.00 -14.79 414.76 -11.07 -25.86 By element: Atomic # 1 Polarization: -8.68 SS G_CDS: -5.93 Total: -14.61 kcal Atomic # 6 Polarization: 1.60 SS G_CDS: -4.11 Total: -2.51 kcal Atomic # 7 Polarization: 0.59 SS G_CDS: 0.03 Total: 0.62 kcal Atomic # 8 Polarization: -5.81 SS G_CDS: -2.24 Total: -8.05 kcal Atomic # 14 Polarization: -2.50 SS G_CDS: -5.07 Total: -7.57 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -14.79 -11.07 -25.86 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.459 kcal (2) G-P(sol) polarization free energy of solvation -14.788 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.671 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.071 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.858 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.600 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds