Wall clock time and date at job start Sun Mar 7 2021 04:37:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86307 * 109.47119 * 2 1 4 4 C 1.50698 * 109.47383 * 119.99571 * 2 1 3 5 5 C 1.38244 * 119.97515 * 245.00537 * 4 2 1 6 6 C 1.38285 * 120.10971 * 179.97438 * 5 4 2 7 7 C 1.38122 * 120.05986 * 0.03707 * 6 5 4 8 8 C 1.38751 * 119.94258 * 359.97438 * 7 6 5 9 9 O 1.35909 * 120.05697 * 180.02562 * 8 7 6 10 10 C 1.42897 * 116.99814 * 0.02562 * 9 8 7 11 11 C 1.50696 * 109.46960 * 180.02562 * 10 9 8 12 12 O 1.21280 * 120.00487 * 359.97438 * 11 10 9 13 13 N 1.34781 * 119.99783 * 180.02562 * 11 10 9 14 14 C 1.46504 * 119.99665 * 179.97438 * 13 11 10 15 15 H 1.08994 * 112.90940 * 336.24759 * 14 13 11 16 16 C 1.53779 * 113.61484 * 107.49929 * 14 13 11 17 17 C 1.53785 * 87.08093 * 89.11287 * 16 14 13 18 18 H 1.09002 * 113.61570 * 270.88522 * 17 16 14 19 19 C 1.52995 * 113.69093 * 139.99088 * 17 16 14 20 20 N 1.46500 * 109.47108 * 85.93603 * 19 17 16 21 21 C 1.34957 * 126.03656 * 124.71979 * 20 19 17 22 22 C 1.35318 * 107.74253 * 179.83870 * 21 20 19 23 23 C 1.39864 * 107.92189 * 0.42193 * 22 21 20 24 24 N 1.30845 * 108.20544 * 359.73636 * 23 22 21 25 25 C 1.53781 * 87.08241 * 25.43228 * 17 16 14 26 26 C 1.38172 * 119.96948 * 65.29550 * 4 2 1 27 27 H 0.96699 * 114.00302 * 300.00198 * 1 2 3 28 28 H 1.09000 * 109.47604 * 240.00049 * 2 1 3 29 29 H 1.48499 * 110.00076 * 178.67992 * 3 2 1 30 30 H 1.48503 * 109.99507 * 299.99572 * 3 2 1 31 31 H 1.07999 * 119.94181 * 359.97438 * 5 4 2 32 32 H 1.08004 * 119.97272 * 180.02562 * 6 5 4 33 33 H 1.07996 * 120.02902 * 180.02562 * 7 6 5 34 34 H 1.09003 * 109.47245 * 60.00050 * 10 9 8 35 35 H 1.09007 * 109.46941 * 300.00082 * 10 9 8 36 36 H 0.96996 * 120.00382 * 359.97438 * 13 11 10 37 37 H 1.09003 * 113.61775 * 334.57164 * 16 14 13 38 38 H 1.08996 * 113.61960 * 203.65890 * 16 14 13 39 39 H 1.09005 * 109.47501 * 205.93599 * 19 17 16 40 40 H 1.09004 * 109.47494 * 325.93611 * 19 17 16 41 41 H 1.07997 * 126.12591 * 359.97438 * 21 20 19 42 42 H 1.07997 * 126.03611 * 180.15339 * 22 21 20 43 43 H 1.07996 * 125.89869 * 179.75774 * 23 22 21 44 44 H 1.09005 * 113.61302 * 89.11252 * 25 17 16 45 45 H 1.08993 * 113.62030 * 220.02098 * 25 17 16 46 46 H 1.08003 * 120.02749 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.6386 -0.0115 2.1910 6 6 3.1005 -0.6604 3.3214 7 6 2.8567 -2.0090 3.4932 8 6 2.1472 -2.7127 2.5306 9 8 1.9056 -4.0397 2.6975 10 6 2.4109 -4.6463 3.8885 11 6 2.0496 -6.1092 3.8994 12 8 1.4208 -6.5855 2.9782 13 7 2.4243 -6.8882 4.9335 14 6 2.0725 -8.3104 4.9442 15 1 1.2025 -8.5369 4.3280 16 6 3.2684 -9.2427 4.6882 17 6 3.5002 -9.2338 6.2084 18 1 4.1522 -8.4281 6.5460 19 6 3.8970 -10.5973 6.7778 20 7 5.3474 -10.7701 6.6655 21 6 6.1936 -11.0559 7.6771 22 6 7.4417 -11.1361 7.1606 23 6 7.3566 -10.8815 5.7879 24 7 6.1016 -10.6619 5.4900 25 6 2.0026 -8.9169 6.3557 26 6 1.6898 -2.0608 1.3949 27 1 -0.3934 0.4417 0.7650 28 1 1.7924 -0.5138 -0.8900 29 1 3.5345 1.7704 0.0321 30 1 1.5614 2.4678 -1.2086 31 1 2.8308 1.0429 2.0582 32 1 3.6525 -0.1122 4.0706 33 1 3.2173 -2.5152 4.3765 34 1 1.9737 -4.1572 4.7591 35 1 3.4954 -4.5400 3.9185 36 1 2.9269 -6.5074 5.6705 37 1 4.0732 -8.7750 4.1211 38 1 2.9846 -10.2191 4.2956 39 1 3.6047 -10.6522 7.8265 40 1 3.3928 -11.3854 6.2184 41 1 5.9229 -11.1975 8.7130 42 1 8.3447 -11.3537 7.7117 43 1 8.1838 -10.8686 5.0938 44 1 1.3727 -9.8042 6.4189 45 1 1.7854 -8.1861 7.1347 46 1 1.1416 -2.6074 0.6417 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:37:22 Heat of formation + Delta-G solvation = 41.475376 kcal Electronic energy + Delta-G solvation = -28342.427036 eV Core-core repulsion = 24202.283058 eV Total energy + Delta-G solvation = -4140.143978 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.11835 -41.62865 -41.03286 -39.68715 -38.73402 -37.20401 -35.14973 -33.59124 -32.50312 -31.68112 -30.97699 -29.61574 -28.30959 -26.87321 -26.79069 -24.41433 -23.70461 -22.81214 -21.95637 -21.74797 -21.58064 -20.45759 -19.35004 -18.61030 -18.17533 -17.66938 -17.49959 -17.32610 -17.04801 -16.75612 -16.42745 -16.13783 -15.92050 -15.55155 -15.38956 -15.10065 -14.94876 -14.89495 -14.67017 -14.44706 -14.15312 -13.98901 -13.85656 -13.69120 -13.53658 -13.45667 -12.99845 -12.95935 -12.58231 -12.36546 -12.20396 -11.96929 -11.77317 -11.68090 -11.59412 -11.37818 -10.94397 -10.47013 -10.33191 -10.20131 -9.95959 -9.50502 -9.29241 -5.02909 0.17545 0.37642 0.98801 1.25016 1.40597 1.43063 1.55835 1.64880 1.97411 1.98161 2.49517 2.64302 3.15635 3.27897 3.39621 3.48657 3.49910 3.61998 3.62623 3.72281 3.84753 3.85193 3.90077 3.92365 3.98248 4.02119 4.16058 4.20760 4.27915 4.33568 4.48235 4.51526 4.57157 4.59649 4.65250 4.69779 4.82439 4.89423 4.94187 4.96258 5.03250 5.12337 5.20562 5.32163 5.40318 5.42406 5.62404 5.75132 6.07635 6.19422 6.34000 6.58454 6.80644 7.04428 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.071 4.071 3 Si 0.692 3.308 4 C -0.080 4.080 5 C -0.153 4.153 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.129 3.871 9 O -0.288 6.288 10 C 0.041 3.959 11 C 0.519 3.481 12 O -0.508 6.508 13 N -0.711 5.711 14 C 0.119 3.881 15 H 0.108 0.892 16 C -0.133 4.133 17 C -0.122 4.122 18 H 0.094 0.906 19 C 0.142 3.858 20 N -0.372 5.372 21 C 0.049 3.951 22 C -0.274 4.274 23 C 0.041 3.959 24 N -0.289 5.289 25 C -0.136 4.136 26 C -0.120 4.120 27 H 0.379 0.621 28 H 0.116 0.884 29 H -0.257 1.257 30 H -0.254 1.254 31 H 0.130 0.870 32 H 0.132 0.868 33 H 0.130 0.870 34 H 0.095 0.905 35 H 0.094 0.906 36 H 0.402 0.598 37 H 0.076 0.924 38 H 0.094 0.906 39 H 0.098 0.902 40 H 0.088 0.912 41 H 0.172 0.828 42 H 0.146 0.854 43 H 0.182 0.818 44 H 0.102 0.898 45 H 0.079 0.921 46 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.464 1.610 9.476 9.723 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.181 4.181 3 Si 0.594 3.406 4 C -0.080 4.080 5 C -0.170 4.170 6 C -0.091 4.091 7 C -0.225 4.225 8 C 0.084 3.916 9 O -0.200 6.200 10 C -0.038 4.038 11 C 0.303 3.697 12 O -0.381 6.381 13 N -0.364 5.364 14 C 0.014 3.986 15 H 0.126 0.874 16 C -0.172 4.172 17 C -0.141 4.141 18 H 0.112 0.888 19 C 0.020 3.980 20 N -0.155 5.155 21 C -0.097 4.097 22 C -0.304 4.304 23 C -0.145 4.145 24 N -0.111 5.111 25 C -0.175 4.175 26 C -0.139 4.139 27 H 0.227 0.773 28 H 0.133 0.867 29 H -0.182 1.182 30 H -0.179 1.179 31 H 0.147 0.853 32 H 0.149 0.851 33 H 0.147 0.853 34 H 0.113 0.887 35 H 0.112 0.888 36 H 0.236 0.764 37 H 0.095 0.905 38 H 0.112 0.888 39 H 0.116 0.884 40 H 0.106 0.894 41 H 0.189 0.811 42 H 0.164 0.836 43 H 0.199 0.801 44 H 0.120 0.880 45 H 0.098 0.902 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.462 1.698 6.753 6.978 hybrid contribution 1.301 -0.719 1.315 1.985 sum 1.764 0.979 8.068 8.316 Atomic orbital electron populations 1.86528 1.16853 1.81716 1.49176 1.25137 0.85435 1.10273 0.97301 0.94711 0.81015 0.77747 0.87164 1.20162 0.97758 0.93570 0.96533 1.20924 1.01424 0.99566 0.95105 1.20908 0.97556 0.93597 0.97016 1.21291 1.04705 0.96084 1.00412 1.19048 0.95382 0.82421 0.94782 1.86177 1.73754 1.20120 1.39975 1.22446 1.00692 0.91800 0.88818 1.20027 0.79683 0.87415 0.82533 1.90795 1.37899 1.74726 1.34715 1.45455 1.58366 1.09259 1.23331 1.21865 0.99234 0.79487 0.97988 0.87384 1.23400 0.98220 1.00368 0.95186 1.22910 0.96719 0.96710 0.97779 0.88758 1.21784 0.75333 0.98086 1.02759 1.48746 1.07117 1.54235 1.05361 1.22610 0.90739 1.01377 0.94929 1.21559 0.97856 1.15840 0.95125 1.23953 0.94884 0.99464 0.96187 1.77406 1.04011 1.23781 1.05879 1.23355 0.95515 1.01827 0.96810 1.20287 1.02865 0.93662 0.97078 0.77336 0.86712 1.18224 1.17925 0.85300 0.85051 0.85264 0.88669 0.88767 0.76371 0.90513 0.88766 0.88399 0.89409 0.81059 0.83573 0.80133 0.87971 0.90217 0.84632 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.57 12.84 -35.23 -0.45 -1.02 16 2 C -0.07 -0.04 2.80 36.00 0.10 0.06 16 3 Si 0.69 -0.56 29.80 -169.99 -5.07 -5.63 16 4 C -0.08 -0.08 5.35 -104.64 -0.56 -0.64 16 5 C -0.15 0.06 8.67 -39.56 -0.34 -0.28 16 6 C -0.07 0.06 10.04 -39.61 -0.40 -0.34 16 7 C -0.21 0.04 9.04 -39.43 -0.36 -0.31 16 8 C 0.13 0.29 6.69 -39.22 -0.26 0.02 16 9 O -0.29 -0.97 9.67 -39.36 -0.38 -1.35 16 10 C 0.04 -0.03 5.22 36.00 0.19 0.16 16 11 C 0.52 0.86 7.91 -10.99 -0.09 0.77 16 12 O -0.51 -3.45 16.10 -14.35 -0.23 -3.68 16 13 N -0.71 1.12 5.26 -53.02 -0.28 0.84 16 14 C 0.12 -0.14 4.32 -67.11 -0.29 -0.43 16 15 H 0.11 0.08 7.47 -51.93 -0.39 -0.31 16 16 C -0.13 0.09 7.43 -25.92 -0.19 -0.10 16 17 C -0.12 0.33 3.70 -89.81 -0.33 0.00 16 18 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 19 C 0.14 -0.36 6.34 -4.04 -0.03 -0.38 16 20 N -0.37 -0.19 3.68 -61.36 -0.23 -0.42 16 21 C 0.05 -0.02 11.45 -17.22 -0.20 -0.22 16 22 C -0.27 -0.14 10.80 -40.01 -0.43 -0.57 16 23 C 0.04 0.07 12.03 -17.36 -0.21 -0.14 16 24 N -0.29 -0.84 12.42 30.62 0.38 -0.46 16 25 C -0.14 0.53 7.39 -25.92 -0.19 0.34 16 26 C -0.12 -0.32 9.63 -39.43 -0.38 -0.70 16 27 H 0.38 -1.13 8.70 45.56 0.40 -0.74 16 28 H 0.12 0.12 7.96 -51.93 -0.41 -0.29 16 29 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 30 H -0.25 -0.63 7.11 56.52 0.40 -0.22 16 31 H 0.13 -0.32 4.90 -52.49 -0.26 -0.58 16 32 H 0.13 -0.43 8.06 -52.48 -0.42 -0.85 16 33 H 0.13 -0.37 6.30 -52.49 -0.33 -0.70 16 34 H 0.10 -0.33 7.66 -51.93 -0.40 -0.72 16 35 H 0.09 -0.28 7.66 -51.93 -0.40 -0.68 16 36 H 0.40 -1.84 8.70 -40.82 -0.36 -2.19 16 37 H 0.08 0.12 8.14 -51.93 -0.42 -0.31 16 38 H 0.09 -0.05 7.92 -51.93 -0.41 -0.46 16 39 H 0.10 -0.48 8.07 -51.93 -0.42 -0.90 16 40 H 0.09 -0.23 7.88 -51.93 -0.41 -0.64 16 41 H 0.17 -0.63 8.06 -52.49 -0.42 -1.05 16 42 H 0.15 -0.17 8.06 -52.49 -0.42 -0.60 16 43 H 0.18 -0.14 8.06 -52.49 -0.42 -0.56 16 44 H 0.10 -0.48 8.10 -51.93 -0.42 -0.90 16 45 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 46 H 0.14 0.45 8.06 -52.48 -0.42 0.03 16 LS Contribution 388.81 15.07 5.86 5.86 Total: 0.00 -11.92 388.81 -10.75 -22.67 By element: Atomic # 1 Polarization: -7.68 SS G_CDS: -6.38 Total: -14.06 kcal Atomic # 6 Polarization: 1.22 SS G_CDS: -3.97 Total: -2.75 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: -0.12 Total: -0.04 kcal Atomic # 8 Polarization: -4.99 SS G_CDS: -1.06 Total: -6.06 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.07 Total: -5.63 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -11.92 -10.75 -22.67 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.142 kcal (2) G-P(sol) polarization free energy of solvation -11.921 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.221 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.745 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.667 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.475 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds