Wall clock time and date at job start Sun Mar 7 2021 04:37:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35984 * 116.99517 * 2 1 4 4 C 1.38680 * 119.99546 * 179.97438 * 3 2 1 5 5 C 1.38156 * 119.99653 * 179.74706 * 4 3 2 6 6 C 1.50695 * 119.99908 * 180.27694 * 5 4 3 7 7 O 1.42903 * 109.47053 * 255.28231 * 6 5 4 8 8 Si 1.86305 * 109.47187 * 15.27575 * 6 5 4 9 9 C 1.38676 * 119.99847 * 0.55340 * 5 4 3 10 10 O 1.35978 * 119.99772 * 179.71789 * 9 5 4 11 11 C 1.42906 * 117.00118 * 179.72902 * 10 9 5 12 12 C 1.50695 * 109.47045 * 180.02562 * 11 10 9 13 13 O 1.21274 * 120.00413 * 0.27121 * 12 11 10 14 14 N 1.34784 * 119.99635 * 180.02562 * 12 11 10 15 15 C 1.46499 * 119.99971 * 179.97438 * 14 12 11 16 16 H 1.09001 * 112.84942 * 25.33046 * 15 14 12 17 17 C 1.53781 * 113.61562 * 156.52736 * 15 14 12 18 18 C 1.53786 * 87.07827 * 89.11795 * 17 15 14 19 19 H 1.08997 * 113.61112 * 270.80055 * 18 17 15 20 20 C 1.52996 * 113.61039 * 139.98196 * 18 17 15 21 21 N 1.46506 * 109.46930 * 174.99990 * 20 18 17 22 22 C 1.34946 * 126.03865 * 124.71790 * 21 20 18 23 23 C 1.35316 * 107.74428 * 179.84135 * 22 21 20 24 24 C 1.39874 * 107.92200 * 0.41944 * 23 22 21 25 25 N 1.30842 * 108.20156 * 359.74079 * 24 23 22 26 26 C 1.53783 * 113.61722 * 254.13839 * 15 14 12 27 27 C 1.38721 * 120.00044 * 359.45155 * 9 5 4 28 28 C 1.38107 * 120.00102 * 0.27062 * 27 9 5 29 29 H 1.09005 * 109.46589 * 179.97438 * 1 2 3 30 30 H 1.08996 * 109.47014 * 299.99096 * 1 2 3 31 31 H 1.09000 * 109.47343 * 59.99982 * 1 2 3 32 32 H 1.07995 * 120.00196 * 0.02562 * 4 3 2 33 33 H 1.08998 * 109.47444 * 135.28048 * 6 5 4 34 34 H 0.96696 * 114.00262 * 59.99527 * 7 6 5 35 35 H 1.48500 * 109.99785 * 179.97438 * 8 6 5 36 36 H 1.48495 * 110.00333 * 301.32338 * 8 6 5 37 37 H 1.09005 * 109.47002 * 60.00044 * 11 10 9 38 38 H 1.09002 * 109.46834 * 300.00411 * 11 10 9 39 39 H 0.96999 * 120.00044 * 0.02562 * 14 12 11 40 40 H 1.09000 * 113.61420 * 203.66386 * 17 15 14 41 41 H 1.08994 * 113.61421 * 334.57218 * 17 15 14 42 42 H 1.08998 * 109.47494 * 294.99511 * 20 18 17 43 43 H 1.08999 * 109.47276 * 54.99803 * 20 18 17 44 44 H 1.07995 * 126.12615 * 359.97438 * 22 21 20 45 45 H 1.08000 * 126.04378 * 180.16083 * 23 22 21 46 46 H 1.08001 * 125.89870 * 179.72119 * 24 23 22 47 47 H 1.09008 * 113.61277 * 25.42740 * 26 15 14 48 48 H 1.08992 * 113.61683 * 156.33587 * 26 15 14 49 49 H 1.07995 * 119.99936 * 180.25098 * 27 9 5 50 50 H 1.07993 * 120.00264 * 180.02562 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 0.0005 5 6 4.0584 2.5153 -0.0047 6 6 5.5632 2.5942 -0.0105 7 8 6.0258 2.9641 1.2900 8 14 6.2705 0.9335 -0.4718 9 6 3.3030 3.6782 0.0010 10 8 3.9203 4.8898 0.0016 11 6 3.0803 6.0460 0.0017 12 6 3.9345 7.2874 0.0017 13 8 5.1435 7.1918 -0.0032 14 7 3.3548 8.5043 0.0023 15 6 4.1851 9.7112 0.0029 16 1 5.1730 9.5455 -0.4269 17 6 3.4695 10.9515 -0.5577 18 6 2.9826 11.2214 0.8758 19 1 2.0353 10.7374 1.1135 20 6 3.0073 12.7014 1.2630 21 7 2.4173 12.8679 2.5936 22 6 3.0052 13.4599 3.6543 23 6 2.1332 13.4138 4.6880 24 6 0.9764 12.7631 4.2466 25 7 1.1456 12.4354 2.9912 26 6 4.2170 10.4364 1.3587 27 6 1.9177 3.6056 0.0006 28 6 1.2907 2.3750 0.0001 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5137 0.8900 31 1 -0.3634 0.5138 -0.8900 32 1 4.0194 0.3786 0.0005 33 1 5.8852 3.3407 -0.7365 34 1 5.7752 2.3434 1.9879 35 1 7.7540 0.9983 -0.4816 36 1 5.8130 -0.0991 0.4923 37 1 2.4507 6.0376 0.8915 38 1 2.4514 6.0381 -0.8885 39 1 2.3878 8.5808 0.0030 40 1 4.1499 11.7133 -0.9384 41 1 2.6657 10.7142 -1.2545 42 1 4.0377 13.0565 1.2755 43 1 2.4335 13.2767 0.5365 44 1 3.9936 13.8946 3.6740 45 1 2.3022 13.8060 5.6800 46 1 0.0957 12.5650 4.8396 47 1 4.0161 9.7833 2.2080 48 1 5.1012 11.0576 1.5009 49 1 1.3295 4.5113 0.0010 50 1 0.2123 2.3184 -0.0007 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:37:26 Heat of formation + Delta-G solvation = 11.272831 kcal Electronic energy + Delta-G solvation = -33164.020899 eV Core-core repulsion = 28548.347430 eV Total energy + Delta-G solvation = -4615.673469 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -42.11582 -41.78095 -41.22670 -40.14726 -39.27400 -38.08854 -36.88056 -35.12512 -33.55674 -32.78660 -31.14051 -30.94751 -29.64974 -28.38610 -27.99002 -26.92949 -26.55704 -24.53531 -23.60290 -22.41660 -22.10890 -21.82351 -21.63853 -20.30499 -19.61955 -18.76854 -18.57938 -18.18565 -17.67298 -17.52607 -17.21283 -17.06589 -16.70362 -16.48695 -16.08128 -15.98503 -15.91602 -15.56307 -15.33343 -15.26562 -15.09818 -14.70058 -14.57108 -14.35766 -14.26505 -14.00281 -13.96325 -13.70902 -13.60007 -13.53004 -13.43984 -12.99902 -12.92777 -12.59198 -12.38991 -12.36936 -11.81470 -11.78337 -11.60027 -11.59346 -11.47332 -11.45882 -10.90050 -10.40355 -10.32036 -10.19423 -10.10813 -9.47893 -8.77163 -4.85338 0.07373 0.39851 0.99525 1.39064 1.41844 1.46982 1.56555 1.68464 1.97942 2.06287 2.26612 2.54192 2.57922 3.21104 3.31437 3.35445 3.44019 3.51284 3.60955 3.68368 3.69752 3.80359 3.83930 3.91616 3.93989 4.02560 4.03824 4.09201 4.14379 4.17407 4.26959 4.33184 4.35666 4.48942 4.49689 4.51750 4.60935 4.63069 4.66171 4.67632 4.84747 4.85779 4.90505 5.00539 5.05000 5.13642 5.15410 5.21758 5.40213 5.44167 5.75537 6.08694 6.14609 6.30930 6.42575 6.60245 6.79931 7.08313 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.316 6.316 3 C 0.099 3.901 4 C -0.116 4.116 5 C -0.105 4.105 6 C -0.064 4.064 7 O -0.518 6.518 8 Si 0.688 3.312 9 C 0.118 3.882 10 O -0.277 6.277 11 C 0.040 3.960 12 C 0.519 3.481 13 O -0.505 6.505 14 N -0.712 5.712 15 C 0.125 3.875 16 H 0.108 0.892 17 C -0.136 4.136 18 C -0.124 4.124 19 H 0.105 0.895 20 C 0.142 3.858 21 N -0.370 5.370 22 C 0.053 3.947 23 C -0.275 4.275 24 C 0.044 3.956 25 N -0.297 5.297 26 C -0.147 4.147 27 C -0.170 4.170 28 C -0.161 4.161 29 H 0.102 0.898 30 H 0.055 0.945 31 H 0.056 0.944 32 H 0.144 0.856 33 H 0.121 0.879 34 H 0.371 0.629 35 H -0.255 1.255 36 H -0.258 1.258 37 H 0.092 0.908 38 H 0.094 0.906 39 H 0.403 0.597 40 H 0.101 0.899 41 H 0.081 0.919 42 H 0.098 0.902 43 H 0.087 0.913 44 H 0.172 0.828 45 H 0.147 0.853 46 H 0.182 0.818 47 H 0.073 0.927 48 H 0.093 0.907 49 H 0.133 0.867 50 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.261 2.036 -2.243 6.071 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.054 3.946 4 C -0.134 4.134 5 C -0.106 4.106 6 C -0.173 4.173 7 O -0.324 6.324 8 Si 0.589 3.411 9 C 0.072 3.928 10 O -0.189 6.189 11 C -0.039 4.039 12 C 0.303 3.697 13 O -0.378 6.378 14 N -0.366 5.366 15 C 0.019 3.981 16 H 0.126 0.874 17 C -0.175 4.175 18 C -0.143 4.143 19 H 0.123 0.877 20 C 0.021 3.979 21 N -0.153 5.153 22 C -0.093 4.093 23 C -0.305 4.305 24 C -0.142 4.142 25 N -0.119 5.119 26 C -0.185 4.185 27 C -0.189 4.189 28 C -0.179 4.179 29 H 0.121 0.879 30 H 0.074 0.926 31 H 0.075 0.925 32 H 0.162 0.838 33 H 0.139 0.861 34 H 0.218 0.782 35 H -0.180 1.180 36 H -0.184 1.184 37 H 0.110 0.890 38 H 0.112 0.888 39 H 0.237 0.763 40 H 0.120 0.880 41 H 0.099 0.901 42 H 0.116 0.884 43 H 0.105 0.895 44 H 0.190 0.810 45 H 0.164 0.836 46 H 0.199 0.801 47 H 0.091 0.909 48 H 0.112 0.888 49 H 0.151 0.849 50 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -3.755 1.067 -3.510 5.250 hybrid contribution -1.054 0.996 2.080 2.535 sum -4.808 2.063 -1.431 5.424 Atomic orbital electron populations 1.23094 0.78094 1.04332 1.01342 1.86108 1.21523 1.26295 1.89000 1.18774 0.91902 0.84500 0.99406 1.20256 0.91981 0.97302 1.03851 1.19389 0.96532 0.89875 1.04812 1.24903 0.90907 1.12813 0.88727 1.86709 1.78083 1.51382 1.16196 0.95025 0.80701 0.74739 0.90632 1.18625 0.90465 0.84906 0.98811 1.86247 1.33188 1.10750 1.88703 1.22433 0.93173 0.84454 1.03863 1.20024 0.88878 0.84063 0.76697 1.90801 1.14091 1.86383 1.46496 1.45475 1.10183 1.04614 1.76327 1.21770 0.95922 0.83299 0.97079 0.87422 1.23341 1.00918 0.97316 0.95886 1.23033 1.00089 0.94444 0.96695 0.87698 1.21790 0.98512 0.97333 0.80260 1.48713 1.11970 1.44593 1.09988 1.22598 0.99781 0.99146 0.87808 1.21559 0.95500 1.12342 1.01068 1.23919 0.99502 0.98143 0.92650 1.77306 0.97493 1.22541 1.14562 1.23575 0.97890 0.99063 0.97998 1.21059 0.92963 0.98681 1.06223 1.21089 1.00298 0.91527 1.05032 0.87947 0.92645 0.92503 0.83828 0.86082 0.78239 1.18028 1.18360 0.88991 0.88841 0.76283 0.88017 0.90079 0.88373 0.89483 0.81048 0.83550 0.80096 0.90871 0.88822 0.84925 0.84771 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.32 -0.47 10.50 -19.69 -0.21 -0.68 16 3 C 0.10 0.15 6.69 -39.24 -0.26 -0.11 16 4 C -0.12 -0.19 8.59 -39.45 -0.34 -0.53 16 5 C -0.10 -0.24 5.27 -104.49 -0.55 -0.79 16 6 C -0.06 -0.16 2.37 36.00 0.09 -0.07 16 7 O -0.52 -2.17 12.88 -35.23 -0.45 -2.63 16 8 Si 0.69 0.55 30.26 -169.99 -5.14 -4.59 16 9 C 0.12 0.27 6.66 -39.24 -0.26 0.01 16 10 O -0.28 -0.95 9.00 -39.58 -0.36 -1.31 16 11 C 0.04 -0.01 5.22 36.00 0.19 0.17 16 12 C 0.52 0.94 7.91 -10.98 -0.09 0.85 16 13 O -0.50 -3.47 16.12 -14.35 -0.23 -3.70 16 14 N -0.71 0.98 5.26 -53.02 -0.28 0.70 16 15 C 0.12 -0.16 4.30 -67.12 -0.29 -0.45 16 16 H 0.11 0.05 7.50 -51.93 -0.39 -0.34 16 17 C -0.14 0.49 7.38 -25.92 -0.19 0.30 16 18 C -0.12 0.30 3.76 -89.66 -0.34 -0.04 16 19 H 0.10 -0.10 7.96 -51.93 -0.41 -0.52 16 20 C 0.14 -0.32 6.35 -4.04 -0.03 -0.34 16 21 N -0.37 -0.29 3.68 -61.37 -0.23 -0.52 16 22 C 0.05 0.01 11.45 -17.22 -0.20 -0.19 16 23 C -0.28 -0.23 10.80 -40.01 -0.43 -0.67 16 24 C 0.04 0.07 12.03 -17.36 -0.21 -0.14 16 25 N -0.30 -0.87 12.27 30.63 0.38 -0.49 16 26 C -0.15 0.20 7.45 -25.78 -0.19 0.01 16 27 C -0.17 -0.03 9.03 -39.45 -0.36 -0.38 16 28 C -0.16 -0.02 9.03 -39.45 -0.36 -0.38 16 29 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 30 H 0.05 -0.16 7.66 -51.93 -0.40 -0.55 16 31 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 32 H 0.14 0.11 4.86 -52.49 -0.26 -0.14 16 33 H 0.12 0.38 7.82 -51.93 -0.41 -0.03 16 34 H 0.37 0.29 8.70 45.56 0.40 0.69 16 35 H -0.26 -1.00 7.11 56.52 0.40 -0.60 16 36 H -0.26 -0.56 6.67 56.52 0.38 -0.18 16 37 H 0.09 -0.23 7.66 -51.93 -0.40 -0.63 16 38 H 0.09 -0.30 7.66 -51.93 -0.40 -0.70 16 39 H 0.40 -1.65 8.70 -40.82 -0.36 -2.01 16 40 H 0.10 -0.48 8.10 -51.93 -0.42 -0.90 16 41 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 42 H 0.10 -0.42 7.78 -51.93 -0.40 -0.83 16 43 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 44 H 0.17 -0.52 8.06 -52.49 -0.42 -0.94 16 45 H 0.15 -0.12 8.06 -52.49 -0.42 -0.55 16 46 H 0.18 -0.17 8.06 -52.49 -0.42 -0.59 16 47 H 0.07 0.06 8.14 -51.92 -0.42 -0.37 16 48 H 0.09 -0.20 7.90 -51.93 -0.41 -0.61 16 49 H 0.13 -0.34 6.29 -52.49 -0.33 -0.67 16 50 H 0.13 -0.28 6.29 -52.49 -0.33 -0.61 16 LS Contribution 417.12 15.07 6.29 6.29 Total: 0.00 -12.39 417.12 -10.15 -22.53 By element: Atomic # 1 Polarization: -6.72 SS G_CDS: -7.09 Total: -13.81 kcal Atomic # 6 Polarization: 1.02 SS G_CDS: -2.82 Total: -1.80 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -0.13 Total: -0.31 kcal Atomic # 8 Polarization: -7.06 SS G_CDS: -1.25 Total: -8.31 kcal Atomic # 14 Polarization: 0.55 SS G_CDS: -5.14 Total: -4.59 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -12.39 -10.15 -22.53 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.804 kcal (2) G-P(sol) polarization free energy of solvation -12.386 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.418 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.145 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.532 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.273 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds